Geotrypetes seraphini (Gaboon caecilian): 117350823
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Entry
117350823 CDS
T09159
Name
(RefSeq) transitional endoplasmic reticulum ATPase-like
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04137
Mitophagy - animal
gsh04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117350823
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
117350823
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsh03019
]
117350823
03009 Ribosome biogenesis [BR:
gsh03009
]
117350823
04131 Membrane trafficking [BR:
gsh04131
]
117350823
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gsh04147
]
117350823
Messenger RNA biogenesis [BR:
gsh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
117350823
Ribosome biogenesis [BR:
gsh03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
117350823
Membrane trafficking [BR:
gsh04131
]
SNARE
SNARE associated proteins
Others
117350823
Autophagy
Aggrephagy
Other aggrephagy associated proteins
117350823
Exosome [BR:
gsh04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117350823
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
RuvB_N
AAA_5
CDC48_2
AAA_33
AAA_22
TIP49
AAA_2
RNA_helicase
AAA_28
NPHP3_N
AAA_14
Vps4_C
nSTAND3
Mg_chelatase
AAA_17
Parvo_NS1
AAA_18
ATPase
IstB_IS21
ATPase_2
AAA_7
DUF815
ABC_tran
AAA_24
ResIII
TsaE
Sigma54_activat
Viral_helicase1
NACHT
SLFN-g3_helicase
NB-ARC
KAP_NTPase
Zot
Motif
Other DBs
NCBI-GeneID:
117350823
NCBI-ProteinID:
XP_033781352
UniProt:
A0A6P8NXW2
LinkDB
All DBs
Position
16:complement(50720883..50738969)
Genome browser
AA seq
806 aa
AA seq
DB search
MPTSGGDSKGEDYSTAILQQKHRPNRLLVDEAINEDNSIVSLSQSKMEELHLFRGDTVIL
KGKKRRETVCIVLTDDTCQNEKVRMNRVIRNNLRVRLGDVISIQACPDVKYGKRIHVLPI
DDTIVGLTGNLFEVYLKPYFLEAYRPVHKGDIFLIRGGMRAVEFKIVEVDPSPHCIVAPD
TIIHCEGEPIKREDEEESLNDVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPR
GILLYGPPGTGKTLVARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPA
IIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRSHVIVMAATNRPNSIDPALRR
FGRFDREIDIGIPDSTGRLEILQIHTKNMKLADDVDLERVANETHGHVGADLAALCSEAA
LQAIRKKMNIIDLEDDTIDADILNSMAVTMDDFQWALGQSNPSALRETVVEVPQVTWEDI
GGLDEVKRELQELVQFPVEYPDKFLKFGMTPSRGVLFYGPPGCGKTLLAKAIANECQANF
VSIKGPEMLTMWFGESEANVRDIFDKARQAAPCILFFDELDSIAKARGGGAGDGGGAADR
VINQILTEMDGMSNKKTVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDDGSRVAILKA
NLRKSPIARDVDLNYLAKITHGFSGADLTEICQRACKLAIRESIEAEIRREREHQRHSEA
AMDDDYDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGNFRFPEGKES
SSGDARKSDSGRGSLFRDDGDDDLYN
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgcccacctcaggaggggactccaagggggaggattattccactgccatcctgcaacag
aagcacaggcctaaccgtctcttggtggatgaagccatcaatgaagacaacagtatcgtt
agcttgtcacagagcaaaatggaggagctgcacctgttccgtggtgacacggtaattctg
aagggtaaaaagcgccgggagacagtctgcatcgtgcttactgatgacacgtgccagaat
gagaaagtccgaatgaaccgggtcatcagaaataaccttcgtgtccgtctaggagacgtt
ataagcattcaggcatgtccggatgtgaaatatggaaaacggatccatgttctgcccatt
gatgacaccatcgtgggtctcacaggaaacctgtttgaggtgtacctaaagccctacttc
ctggaggcttatcggcctgtgcacaaaggtgacattttcctgatccgtggagggatgagg
gccgtggagttcaagattgtagaagttgacccttcgccacactgcattgtagcccccgat
actattatccactgcgagggagaacccatcaaaagagaggatgaggaagagagcttaaat
gacgtgggctatgatgacattggaggttgtcggaaacagctggctcagatcaaagagatg
gtggaactacccctccgacacccggccctttttaaagcaattggagtgaaacctccacga
gggattctactatatggaccccctgggacagggaaaactctggtggcacgggcagtcgcc
aatgaaacaggagcatttttcttccttatcaatggtccagagattatgagtaagctggct
ggcgagtcggagagtaacttgaggaaggcctttgaggaagctgagaagaatgcacctgcc
attatcttcattgatgaactggacgccattgctcccaaaagagagaagacacatggtgag
gtggaacgacgaattgtgtcccaactcttgacgctcatggatggcctgaagcaaaggtcc
catgtgattgtcatggctgccaccaatagacccaacagcattgaccctgctctccgccgc
tttggtcgctttgaccgggaaatcgacattggcatcccggattccacaggccggctggag
atcctccaaatccacacaaaaaacatgaagcttgcagatgacgtggatctggagcgagtg
gccaacgagacccacgggcacgtcggcgctgacctggcggcgttgtgctccgaagcggcg
ctgcaagccatccgtaaaaagatgaacattatcgacttggaggatgataccattgatgcg
gacatcctgaactccatggctgtgaccatggacgacttccagtgggctctgggacagagt
aatccatcagcattgcgggagacggtggtggaagtgccacaagtcacatgggaagacatt
ggcgggctggatgaggtgaaaagggagctgcaggaactggtgcagttcccagttgagtac
cccgacaagttcttgaagtttggcatgacaccgtcgcgtggtgtgctcttctatggtcca
cctggctgcggtaagaccctgctggcaaaggccattgccaatgaatgccaagccaacttt
gtatccatcaaagggccagagatgctgaccatgtggtttggggaatctgaagcaaacgta
cgagacattttcgataaggctcgtcaggcagctccttgcatcctcttctttgatgaactg
gactccatcgccaaggctcgaggcggcggcgcaggtgacggaggaggagccgctgaccgt
gtcattaaccagatcctcaccgaaatggacggaatgtccaacaagaagactgtctttatc
atcggtgccacaaacaggccagacatcatagaccctgcgatcctgcgcccgggccgcttg
gatcagctgatctacatcccactccccgatgacgggtctcgagtggccatcctgaaagcc
aacctaagaaagtcacctatagccagggacgtggatttgaactacctggctaagatcacc
cacggcttctccggtgctgatttgacagagatctgtcaacgtgcctgcaagctcgccatc
cgagagtccatcgaagccgagatccggagggagagggagcaccagcgacactcagaggca
gccatggatgacgactatgacccagtcccggagatccggcgtgatcactttgaagaagct
atgaggtttgccaggcgctcggtcagcgacaatgacattcgcaaatacgaaatgtttgcg
cagacgctgcaacagagccggggcttcggcaacttcaggttccccgagggtaaagagtcc
agtagcggtgacgccaggaagagtgacagcggccgagggagcctcttccgagatgacggg
gatgacgacctttataactaa
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