Geotrypetes seraphini (Gaboon caecilian): 117350871
Help
Entry
117350871 CDS
T09159
Symbol
NOP2
Name
(RefSeq) probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase isoform X1
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gsh03009
]
117350871 (NOP2)
Enzymes [BR:
gsh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
117350871 (NOP2)
Ribosome biogenesis [BR:
gsh03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
117350871 (NOP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
Methyltr_RsmF_N
Methyltransf_31
FtsJ
Methyltransf_25
TRM5-TYW2_MTfase
PCMT
Ubie_methyltran
Methyltransf_15
Motif
Other DBs
NCBI-GeneID:
117350871
NCBI-ProteinID:
XP_033781450
UniProt:
A0A6P8PJ03
LinkDB
All DBs
Position
16:complement(300139..315639)
Genome browser
AA seq
684 aa
AA seq
DB search
MGRKLDASRKEKRGPGRKSRKQKGAEAELAHFLAADVPASKRLCSRSRRRAAKRCQELPT
PVDKANADHQELSAPQDKKKDFHQKPITGKKTHEMQHQKASILGFSDENAEWLTLAKRKR
LQSEESKEEECPELGYGSEEDSVSDNEHLSLGSGDAEEMVDDYGTSSNSESEQLPIEKAA
RKLKLLQEKKGSRQGSSSRDDNDDAVASDLALNMDVEEAFVLPSSQAIQEISLHPTDLHV
IHQRIRDNVEVLQNFATRREAERTRQEYLTLLRKDLAVYFSYGDYLIEKLMELFPVSELV
DFLEANEVQRPMTIRTNTLKTRRRDLAQVLINRGVNLDPLGKWSKTGLVIYDSSVPIGAT
PEYLAGHYMLQGASSLLPVMALAPQENEKILDMCCAPGGKTSYIAQLMKNTGMILANDAN
TERLKSVVGNLHRLGVTNTVVSNYDGRQFPKVLGGFDRVLLDAPCSGTGVISKDPMIKTN
KVEVDLQRCAHLQKELLLSAIDSVDANSETGGYLVYCTCSITVEENEWVTEYALKKRNVK
LVPTGLDFGKEGFTRFRERRFHPSLKLARRFYPHTHNMDGFYVAKFKKFSNMIPKLVKEV
DSVLATEPTSLDIPAAVAAPAAKQVKNSKDQGLEVNEQFNGLSPAQHKTGVKCKRKSAMQ
KRLHRKSTAGKAKKHMYKKFKKGN
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgggacggaaactggatgccagcaggaaggagaaacgtgggcccggacgcaaatcccgg
aagcagaagggagccgaggccgaattggcccatttcttggccgcagatgttccggcgtcc
aagcgtttatgtagccgctcccggaggcgagctgcaaaacgctgccaggaactccccacc
cctgtggataaggcgaatgcagaccatcaagagctctccgccccacaagataagaagaaa
gatttccatcagaaacctataacaggcaagaaaacacatgaaatgcagcaccaaaaggcc
agcatcctgggcttcagcgatgagaatgctgagtggctgactctagctaagcgaaagaga
ctccagtcagaggagagcaaggaggaagaatgtccagagctaggttacggtagtgaagaa
gactctgtatcggataatgaacatctgtcattagggagtggtgatgcagaggagatggtg
gatgattatggcacttcatcaaacagtgagtcagagcagctaccaattgaaaaagcagct
cgaaagttgaaattgctccaggagaagaaaggaagcaggcaaggctccagttccagagat
gacaatgatgatgctgtggcttcagatctggcactgaatatggatgttgaagaagccttt
gtgctccccagcagccaggcaattcaggagatatctcttcaccctactgacctccatgtg
atccaccagcgaatccgtgacaatgtggaagtactacaaaactttgcaactcggcgagaa
gcagaacgtacacggcaggaatacctgacactgctacggaaagacttggctgtgtatttc
agctatggagattacctgattgaaaaattgatggagctgttcccggtgtctgaattagtc
gatttcctagaggcaaatgaagtgcagcggcctatgactatcagaaccaacacattgaag
acacggaggcgagatcttgctcaggtgctcattaatcgtggtgtgaacctggatcctctt
ggcaagtggtcaaaaactgggctagtaatctatgactcgtctgtgcccattggtgcaacc
ccggagtaccttgctggacattacatgctacagggagcttccagcctgctgcctgtcatg
gccttggcaccacaggagaatgagaagatcctggacatgtgttgtgcacctggagggaag
accagttacatagctcagctgatgaagaacacaggcatgattcttgctaatgatgcaaat
actgagcgtttgaagagtgtcgtgggcaacctgcaccgtttgggagtcaccaacacggtt
gtcagcaattatgacggtcgccagttccccaaggttctgggaggctttgaccgggttctt
ctagatgccccttgcagcggcactggcgtgatttccaaggaccctatgattaaaaccaat
aaggtagaagtggacctgcagcgctgtgcacacttgcagaaggagctactcctaagtgca
attgattcggtggacgcaaattcagagacgggcggataccttgtatattgcacctgctcc
atcacggtggaggagaatgagtgggttacagaatatgccctgaagaaaagaaatgtgaag
ttggtgccgactggactggatttcggcaaggagggattcacaaggtttcgtgaaaggcga
ttccacccctcgctgaagttggcacgtcgcttttacccccacacccacaacatggatgga
ttctatgtagccaaattcaagaagttttccaacatgattccaaagcttgtgaaagaggtg
gattctgtcctagcaactgagcccacatcattggatattcctgcagctgttgctgctcca
gctgctaagcaggtgaagaatagcaaagatcaaggacttgaggtcaatgaacagttcaat
gggttgagccctgcccaacataaaacaggagtaaagtgtaagaggaagtcagctatgcag
aagagactgcacaggaaaagtaccgcaggcaaagccaagaaacacatgtataagaagttt
aaaaaggggaactag
DBGET
integrated database retrieval system
