Geotrypetes seraphini (Gaboon caecilian): 117351046
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Entry
117351046 CDS
T09159
Symbol
SEC13
Name
(RefSeq) protein SEC13 homolog isoform X1
KO
K14004
protein transport protein SEC13
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh03013
Nucleocytoplasmic transport
gsh04141
Protein processing in endoplasmic reticulum
gsh04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117351046 (SEC13)
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117351046 (SEC13)
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
117351046 (SEC13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsh03019
]
117351046 (SEC13)
04131 Membrane trafficking [BR:
gsh04131
]
117351046 (SEC13)
Messenger RNA biogenesis [BR:
gsh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
117351046 (SEC13)
Membrane trafficking [BR:
gsh04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
117351046 (SEC13)
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
117351046 (SEC13)
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
117351046 (SEC13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
NBCH_WD40
MIOS_WD40
Motif
Other DBs
NCBI-GeneID:
117351046
NCBI-ProteinID:
XP_033781618
UniProt:
A0A6P8Q3B1
LinkDB
All DBs
Position
17:complement(2207887..2215197)
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AA seq
320 aa
AA seq
DB search
MVSVINTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVKNGGQILIADLRGHEGPV
WQVAWAHPMYGNILVSCSYDRKVIIWKEENSTWEKTYEYTGHDSSVNSVCWAPHDYGLLL
ACGSSDGAISLLTYTGDGPWEVKKINNAHTIGCNAVSWAPAVVPGSLIDQPSGQKPNYIK
RFVSGGCDNLVKIWKEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIVSCSQDGRVF
IWTCDDASGNCWTPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDGQWVCIS
DVNKGQGAVSAVTESQQNEQ
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atggtgtctgtaattaacacagtggacacttcccatgaggatatgattcatgatgcccag
atggattattatggcacccgacttgcaacttgctcctcagaccgatcagtgaaaattttt
gacgtaaaaaacggggggcagatcttgatagctgacttgagagggcatgaaggcccggta
tggcaggttgcttgggctcaccctatgtatggcaacatcctagtttcatgttcctatgac
cggaaggttatcatctggaaggaagaaaatagcacatgggaaaaaacctatgaatacacc
ggacatgactcttcagtgaactctgtctgctgggctccccatgattatggattattgctg
gcatgtggtagctcagatggagcgatctccctccttacatatacaggagatggcccctgg
gaagtgaaaaaaatcaacaatgcacatacaatcggctgcaatgcagtaagctgggcgcca
gctgtagttcctggcagcctcatcgatcagccgtctggacaaaagccaaactacatcaaa
cgatttgtgtccgggggctgtgataacctagtgaagatctggaaagaagaggatgggcag
tggaaggaagagcagaaactggaggctcacagtgactgggttcgagatgtagcctgggct
ccatctatcggtttgccgaccagtaccattgtcagctgttcacaggatggcagagtgttt
atctggacctgtgatgatgcatctggaaactgttggaccccaaaacttcttcacaagttc
aatgatgtggtttggcacgtgagctggtccattacagccaacattctcgctgtctcggga
ggagataataaggtgactttgtggaaggagtccgtggatggccagtgggtctgtataagt
gacgtaaataaaggccagggagccgtgtctgcagtaacagagagccaacagaatgagcag
tga
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integrated database retrieval system
