Geotrypetes seraphini (Gaboon caecilian): 117351069
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Entry
117351069 CDS
T09159
Name
(RefSeq) laminin subunit beta-4-like isoform X1
KO
K06243
laminin, beta 2
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04510
Focal adhesion
gsh04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117351069
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117351069
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_EGF
Laminin_N
LAMININ_IV_B
Laminin_II
Laminin_I
Sec10_N
COG6_N
F5_F8_type_C
SEN1_N
EzrA
Crescentin
Motif
Other DBs
NCBI-GeneID:
117351069
NCBI-ProteinID:
XP_033781667
UniProt:
A0A6P8NYP8
LinkDB
All DBs
Position
17:complement(7497366..7602960)
Genome browser
AA seq
2061 aa
AA seq
DB search
MKLSRSVSSTGDADERVPNAGRKAEYLELRIQEKIPTVPCKTSSDDAQPGLGALSESEEL
VLSTPQPHYIQQLYSILGPQTAEYFLNPPPIKFQTNPRVQRVIEAMGGYQGAQELWRIIH
QEIHQCRQEVLPEKSLVHQISFPDRGTRSTGMKTVAARRNRLGLIRQMAQLHENRTSLLI
ANNPFPDLNDSRGEEGSDRYLPQLPKNSPHGRSVVTVGRQDPKRLQMKLIGFFSLFAQLL
GSPTEDPDVLGHGCTKGSCYPATGNLLIGRAASLSATSTCGLEEPQDYCIVSHLQDSEKC
FSCDSRAPYLRDSHQIQNVIYLAGREGEKTWWQSENGAESVSIRLDLEAEFHFTHLILKF
KTFRPAAMLIERSADFGRTWKVYRYFSYNCTKMFPGVPINNLHNIDDIICEQRYSDIEPS
SEGEVIFKVLDPAIKVEDPYSLEIQELLQITNLRINFTKLHTLGDNLLDQRVEVLQKYYY
AVYELVVRGSCFCYGHASECSPIEGVQGGIEGMIHGRCVCEHHTKGLNCEHCKDFYHDLP
WRPAEASNPHSCKQCNCNNHSQRCHFDMAVYLATGRVSGGVCDDCQHNTMGRNCQFCKLF
YYHNPRADIRAETACIPCHCDPEGSLHGGVCDTHTDVNMGMIAGQCRCKVNVKGERCDSC
KDGFYGLSRSDPVGCQSCRCDPRGIVTGSVPCDHNSGDCYCKRYVTGRYCNQCLIEFWGL
SHDIAGCRPCACDFGGSYNNRCSTDNGQCDCRPHIIGRQCEDVQPGYFCMPLDYYTYEAE
NAGGLSPADEILPGSPKPEAPSDCVEYYNGIQNGRKVRLRRQRRTIRVLQQRAALRRIRQ
LQHKPDVEVIRREHMPGHMITWTGLGFARVKDGTGLLFQINNIPYPMEYDIMIRYEPESA
EDWEAIVSVTAQVLPMSPRCGNVLPSEQRYTEKLPHTERYIVLPRPFCFENNNQYEIAIR
FQRFGVAHRHMMAFILIDSLVLLPKFSELPGFHGNDPVSVHRQEEMERYMCLDSFKMATM
PALAEMCVRLICSISAIVHDGALPCHCDLQGSTSAVCDKLGGQCKCKPNVIGRRCDQCAP
GTYGFGPYGCSACNCHSQGSVSKFCDPASGQCRCQHSAMGRQCDQCMPGQWGFPNCRPCQ
CNGHSEECDPRTGTCLGCRDYTSGRHCDRCLDGYYGDPVLGSGQQCRPCPCPGYPGSRNY
HGTSCHADKDSNQIICLCAPGYTGTRCDRCSPGYFGTPEHGDGECRPCQCHNNIDPTDPE
SCDPRSGQCLKCLYNTDGPNCAECKPGYYGSAILRSCRRCTCNQQGALPSHCSLDTCYCD
RVSGHCPCRANIVGKNCDQCAPNFWNFGGDLGCEPCACNPTHSLHQDCNMFTGQCRCRPG
FGGRVCAHCQEDYWGNPEQECRACNCHPSGSEITQCDRSTGHCHCRPGFTGWRCDSCTRG
FQDNFPVCTACHPCFGQWDVAVAQLLRQLQWLKQKAADLLAGDLAPEVSNGRIKDLENQL
TVIQQLIGNGTSQSPELLKVMTELLAGARADISRISERLNGLGKHLNETDLKEREQRDRL
DLLNTELSKINITVTRLKKQLEGIVAADFNETYNSILKYYLDSKNAENLANSSVFGPESP
VAQSRNTRHSTERLLKENADTFRRNVTAHKKSLRELQRKIQGLNVVRINEKICGVPGNQT
CDQAPCGGANCRDNLGNRKCGGENCNGALPLSTKALNAAQNVSRELENTATQLTAIAQKI
QEIQGIAKDAKGRSEATLTKAQDAKRRIEDSTNKLRNFIKRIKDFLTEEGADPESIELVA
RQVLNISLPSNASDITRLVKEIRDSIGNLSNVDKVLNSTSESLAKVKELLDQAVQAKNKA
DGVKGNITETQNTLRAAQAKVRAAEKALRKAKQDVTSAETVVKELIGKVEGIEDKEMDIM
NRLGNLSKETDALRKKTETNRQQAKEAKDKADQVLSSTGKLVKEMKKLNEKYTELEDKIG
DMDGMAGGALERVKKVKNEAQALLKKATDVKEKLDGLEETFQNNEREIGLKMVELQELEK
QASELLEHIRREANFYATCES
NT seq
6186 nt
NT seq
+upstream
nt +downstream
nt
atgaagctatccagatcagttagttctaccggagatgcagatgagagagttccaaatgcc
ggaaggaaggctgaatatttagaattgagaatccaagagaagatccctaccgtgccctgc
aaaacctcatcagatgacgcccagcctggcctaggtgcgctgtctgagagcgaagagctg
gttctctccacacctcagccccactatatacaacagttgtacagcatcctaggtcctcag
actgcagaatatttcctgaatcctcctcctatcaagtttcagaccaacccacgcgtgcaa
agagttatagaagccatgggaggatatcagggtgcccaggaattgtggagaatcattcat
caggagattcatcaatgtcggcaggaggttctgccagagaagtcactggtccatcagatc
tccttcccggatcgaggcactcgaagcacggggatgaagacggtggcagcgaggaggaat
cggctcggcctaattcgtcagatggcccagctccatgagaacagaaccagcctgctgata
gctaacaatcccttcccagacctcaatgatagccgtggagaggagggctcggacaggtac
ctccctcagctgccaaagaactcgcctcacggacgttccgtggtgacagtcggaagacaa
gaccctaaacggttgcagatgaagctaattggttttttctcccttttcgcccagctgctg
ggatccccaactgaagaccctgacgtactaggccatggctgtactaaggggagctgctac
ccagccacggggaaccttctgattggccgtgcggcgagccttagcgccacatcaacatgc
ggactggaagagcctcaagattactgcattgtcagccatctccaggactcggagaaatgt
ttctcctgtgattccagagcaccttatcttagagacagccaccaaatacagaatgtgatc
tatctggctggccgggagggagagaagacctggtggcagtcagagaatggtgctgagtcg
gtgagcattcgccttgacctggaggcagagttccattttactcatctcatcctgaaattt
aagaccttccgtcctgcagcaatgttgattgagagatcggcggattttggacgcacctgg
aaagtatatcgttatttctcttacaactgcacgaagatgtttcctggtgtccccatcaac
aacttgcataatatcgatgatattatttgtgagcagcgctactcggacattgaaccatcc
agcgaaggagaggtgattttcaaagttttggatccagcgatcaaggtggaggatccctat
agcctggaaattcaagagcttcttcagatcacaaacctgaggataaacttcacgaagctg
cacaccctcggagacaacctgctggaccaacgggtcgaagtactgcagaagtattattac
gcggtgtatgagctagtggtacgaggaagctgcttctgctacggccatgcctccgagtgc
tcacccattgagggggtgcaaggcggtatcgaggggatgattcacggcagatgtgtgtgt
gagcaccacacgaaagggctgaactgtgaacactgcaaggatttctaccacgatttgcct
tggagaccagccgaagccagcaacccgcattcctgcaaacaatgcaattgcaataaccat
tctcagcgatgccactttgacatggctgtatatctggccaccggcagggtgagcggcggg
gtctgcgacgactgccagcacaataccatgggacgcaactgtcagttctgcaagctgttc
tactatcacaaccccagggcagacatccgggcagagactgcctgcataccgtgccactgt
gatccagagggatctctgcatgggggcgtttgtgacacccacacagatgtgaacatgggc
atgattgcagggcagtgccgttgtaaggtaaacgtgaagggcgaacgctgcgacagctgc
aaggacggtttctatgggctcagcagaagtgaccctgtgggctgccagtcttgcaggtgc
gatcctcggggtattgtcacgggaagtgtaccatgtgaccacaacagcggcgactgctac
tgcaaacgctacgtcacgggacgctactgtaaccagtgcttgatcgaattctggggttta
agccatgatatcgctgggtgccgcccatgtgcctgtgactttggcggatcctacaacaac
aggtgctccacggacaatggccagtgcgactgccggccgcacatcattgggcgccaatgc
gaagatgtccaacctggctacttctgtatgccactggactactatacatacgaagctgag
aatgcggggggcctctcgccggcggacgagatcttaccaggaagccccaaacctgaggca
ccatcagactgtgtggaatactataatggtatccaaaatgggcggaaagtacggctaagg
cgccagcgaaggaccatccgtgtgctgcagcagcgggcagccctgcgtcgcattcgacag
ctccagcacaagccagatgtggaagtgatccgcagggaacatatgccaggtcacatgatc
acttggacaggcctcggattcgctagagtcaaggacggcactggcctgttgttccaaatc
aacaatattccatatcccatggagtatgacatcatgatccgatatgagccggagtcggct
gaggactgggaagccatagtgagcgttactgcccaggtactacccatgagtcctcgttgc
gggaatgtgctgccatctgaacagaggtacactgagaagctccctcatacggaacgatac
atcgtactacccagacctttttgtttcgaaaacaacaaccagtatgaaattgcaattcgg
ttccagcgttttggggttgctcaccgacacatgatggccttcattctgattgattcgctg
gtcctcctgccaaagttctcggagctgcctggcttccacggcaatgatccggtctccgtg
caccgccaagaggagatggaacgttatatgtgcctcgattccttcaagatggccactatg
cccgcactggcggaaatgtgcgtcagacttatctgcagcatctcggcgatcgtccacgac
ggagcactgccatgccactgcgacctccaaggctccaccagtgcagtatgtgacaagctg
ggaggacagtgcaaatgcaaacccaacgtgattggccgtcgatgtgaccagtgtgcgcca
gggacttatggatttggtccatacggctgcagtgcttgtaattgtcactcccaaggctcc
gtcagcaagttctgtgatcccgcttcgggacagtgtcggtgccagcacagtgccatgggt
cgtcagtgtgaccaatgcatgccaggccagtggggctttccaaactgcaggccctgccaa
tgcaacgggcattcggaggagtgcgacccaagaacgggaacctgtcttggctgccgggat
tacaccagcggccgtcactgcgacaggtgcttggatgggtattatggcgacccagttctc
ggttcaggacagcagtgtcggccctgtccatgccctgggtaccccgggagtcgtaattat
cacggcacttcctgccacgctgataaggattccaatcaaatcatctgtctctgtgcacct
ggctatacagggactcgctgcgacagatgctcccctggttattttggaaccccagagcat
ggagacggggaatgtcggccttgtcagtgtcataacaacattgaccctacagatcctgag
tcctgtgaccctcgcagtggccagtgcttgaagtgtctgtataacacagatgggcctaac
tgtgccgaatgcaagcctggctactatggaagcgccatactgcgcagctgcagacgctgc
acctgcaaccagcagggggcgcttccatcccactgctccttggatacctgctactgtgat
agggtctctgggcactgcccctgcagggctaacattgtgggcaagaactgtgatcagtgc
gcccccaacttctggaactttgggggagatctggggtgtgagccgtgtgcctgtaacccc
acacactctctccaccaggattgtaatatgttcacaggacaatgccggtgccgacctggg
tttggcgggagagtgtgcgcgcattgccaggaagattactggggcaatccagagcaggag
tgcagagcgtgtaactgtcacccgtctggctcagaaattacgcagtgcgaccgatcgacc
ggccactgccactgtcggccagggttcaccggatggcgctgcgacagctgcactcgtggc
tttcaggacaacttccctgtctgcaccgcctgccacccgtgctttggccagtgggatgtt
gccgtggcacagctcctgcggcagctgcagtggctgaagcagaaggcggcagacctactg
gcgggtgaccttgctcctgaggtcagcaacggcagaattaaggacctggaaaaccagctg
accgtgattcagcagctgatcggaaatggtacttcccagagtcctgaactcctgaaagta
atgactgaactgctggccggagcaagggcggatatttcccgtatttcagaacggctgaat
gggctggggaagcacttgaatgagacagacctgaaggaacgtgaacagagggaccggctg
gatttgctgaacaccgaattgagcaagattaacataaccgtgacccggctgaagaagcag
ctcgaaggcatcgtagcagcagactttaatgagacatacaacagcatcctgaaatattac
ctggattccaaaaatgccgagaatcttgcaaacagctctgtcttcggaccagaaagccca
gtagctcagtccaggaatacgcgtcatagcactgaaagacttctgaaggagaacgcagat
acgtttcgaagaaatgtgacggctcataagaaatctctgagggagctgcaaaggaagata
caaggcctcaatgtcgttcgcatcaatgagaagatatgtggggttcccggaaaccaaacc
tgcgaccaagcgccctgcggtggtgctaattgcagggacaatcttggcaaccggaaatgc
ggtggggagaactgcaatggcgccctccctctgtccaccaaggcactaaacgcagcgcag
aatgtctcgcgagaactagagaacacagcgacacagctgactgccatagcccagaagatt
caggaaatccagggaatagccaaagacgccaaggggcgaagtgaagcaacacttaccaag
gctcaagacgccaagagacgcatagaagactccaccaacaagctaagaaactttatcaag
aggattaaagatttcctgacagaggaaggagcagatccggagagcattgagttggtggcc
cggcaagtcttgaatatctcactgccctccaacgcaagtgacatcaccagacttgtcaag
gagatcagagatagcatcggcaacttgagcaatgtcgacaaagtcctcaacagcacttcc
gagagcctggccaaagtcaaagaactactcgatcaggccgtgcaagccaagaataaagct
gacggtgtgaagggcaacatcaccgaaacgcaaaatactcttagggcagcccaagcaaaa
gtgagagcagccgagaaagctctgaggaaagcgaagcaagacgtaaccagcgcagagact
gtcgtgaaggagcttattggtaaagttgagggtattgaagacaaagagatggacatcatg
aaccgcctggggaatctgtccaaagaaacagatgccttgcggaagaagacagagaccaac
aggcaacaggccaaggaggccaaggataaggccgaccaagtgctatcaagtactgggaag
ctggtaaaggagatgaagaaactcaatgagaaatacacggaactggaggataagattggg
gatatggatggcatggctggtggtgctttagagagggtgaagaaagtcaagaatgaggca
caggcgcttctgaagaaagccactgatgtcaaggaaaagctggatggtcttgaagagaca
tttcagaacaacgagagagaaattggcttgaagatggtggaacttcaagagcttgaaaag
caagcatcggaattattagagcacatccgacgagaggcaaatttttatgccacctgcgag
tcctaa
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