Geotrypetes seraphini (Gaboon caecilian): 117351115
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Entry
117351115 CDS
T09159
Symbol
NISCH
Name
(RefSeq) nischarin isoform X1
KO
K24095
nischarin
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
gsh04990
]
117351115 (NISCH)
Domain-containing proteins not elsewhere classified [BR:
gsh04990
]
Phox homology (PX) domain-containing proteins
Other PX domain-containing proteins
117351115 (NISCH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_4
PX
LRR_8
LRR_9
LRR_NXF1-5
LRR_14
LRR_LRWD1
PH_PLEKHM2
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
117351115
NCBI-ProteinID:
XP_033781805
UniProt:
A0A6P8PJU7
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All DBs
Position
17:complement(37571343..37720875)
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AA seq
1401 aa
AA seq
DB search
MEAAGFAVGEGREARIVGSEPVENYTVYIIQVKADYHQWTVKHRYSDFHDLHEKLTGEKM
IDKNLLPPKKIIGKNSKSLVEKRQKELEVYLQTLLAKFPTATPKVLSCFLHFHLYEINGI
TAQLSEELFHRGEQLLLAGEVFNIRPLQLYAITQQLRKGKPTCVNGDAKTDLGHILDFTC
RLKYLKISGTRGPVGTSNIQEHFLPFDLSVFKSLQQIEINDCEAKHIQGLTSSKPTLATM
SIQFSAASMKDILVPEASEFDHWEPECPVLECPVTAIVPTWKNLTTLDMSHNWISNIDDS
VKLIRKIEFLDLSHNEISTVENLQHLYNLVHLDLSYNKLASLEGIHVKLGNIKTLNLAGN
LLESLCGLNKLYSLVNLDLSNNKIEQIEEIKNIGRLPCLEKLALSSNPLTIIPDYRTKVL
AIFGDRASEVCLDNTVTTEKELDTVEVLKAIEKAKEAKNKANNANKKLSEDSATSSSSSL
NARSSSPSLPRPISSSQEIVCIEAAIVSSLSSPSSLIPTDPTATLRCSEETDSGSGGEGQ
TSTSDIDGHTGDLSTSSECSQENPCPQNTIILPFSCVSYTATNQDFIHHLSNSIAQALRR
PPHSFTDGEYEGSLTSGPRVTELEDGYFEMGLHKGEQPEWNVASDVAQTVARSPGDQVHI
VKVLWSFSIHIYKGIHQFASCLVLTDDVLAVFEIPKHESQDNHLPNLSAVKLALCFPYTD
LAEFGFLVPEMCLTLKTRCLVSCLFVLSEPQNLQDFYYSLQMLVSQACTSMPPGIMPYSV
KMSLQEFVFQLEGFHHVASNDAEIKGCFPVCLFQSNPNDLQSQSATARTVWAKNAWFYTL
YSTVYDSTKGSPYILLPCWIFFTSQYLYVLKANFHVLFDKSLDSEGVLNAFSLNRIPLAL
VLLRPFHSSAQKKGSFSDGHILQLLIGYRFVTAVFLLPHEKFHFLKVYSLLRTFLQDVKT
IIIFKGSKSPDTVQNHLPDTSNRQAQATSFYKPRLTLSAMYPSEFLLQKLTEENQIPLYL
SVSSSLLYVAGLKGSTIVEFFHSNVAEVENEELRHLMWSSVVFYKTPDVEVTVCVLLSTK
AVYFLLDDSAVPSNEHHQQDFWNQKPSSFESSSFCLSYCLVLKLNDLQSVNIGLFDQYFR
IAGPSADHVVTCLTRDSYSTHAFIQHLMTVLSLLARAPSPEPAEKDFYSEFGRKTTGKME
NYEMIHSSRVKFIYPNEEEIGDLTFVVTEKMANLSNMQSLNILLYVLAFQVNTIDGTPQG
STSLQSKTLILTSSALFLFSEDYISYPLPDFAKEPPKKDKYQLTDGRRIRDLDRVLMGYQ
PYPQALTFVFDDVQNEDLMQNLTLDHFGETLNSPKRDTRRDNEVQWYIFIPSADCRERLI
SLLARQWEILCGRELPLELTG
NT seq
4206 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgcgggctttgcggtcggtgaaggcagagaggctcggattgtgggctcggag
ccggtggagaattacacggtatatatcattcaagttaaagctgactatcaccagtggacc
gtgaagcatcgttacagtgatttccatgatctgcatgaaaagcttactggagaaaaaatg
atagataaaaacctgctgcctcccaaaaagattattgggaaaaattccaaaagtctggtg
gagaagagacagaaagagctagaagtttacttgcagactctcctggcaaagtttcccaca
gctacacccaaagtgttgtcctgtttcttacattttcatttatatgaaatcaatggaatc
acagcacagctttctgaagagctttttcatagaggagaacaattacttctggctggagaa
gtttttaatattaggccactgcagctatatgctataactcaacagctgcgaaaaggcaaa
cccacttgtgttaatggagatgccaaaacggacctgggccacatactggattttacatgc
agactgaaatatttaaagataagtggaacaaggggacctgtgggaaccagcaacattcaa
gaacattttttaccttttgatttgtctgtattcaaatctctacagcagatagagataaat
gattgtgaggcaaaacacatccagggactgacttcttcaaagcccaccttagctacaatg
agcattcaattttctgcagcatcgatgaaggacatcttggtgcctgaggcttcggagttt
gaccattgggaaccagaatgtccagttttggaatgtcctgttacagccattgtcccaaca
tggaagaatttaacaacattggatatgagccacaattggatctctaatattgatgattct
gtgaaactgattcgaaaaattgaattccttgatctaagtcataatgaaatatcaacggta
gaaaatctgcagcatctgtacaaccttgttcacctggacttgtcttacaacaagctggca
tccttagaaggtattcatgtaaaacttggaaatatcaagacattgaatttggcagggaac
cttctggaaagcctctgcggtcttaacaagttgtattccctggtcaacctggaccttagt
aacaacaaaatagaacagatagaagaaattaaaaatataggacgacttccatgcttagag
aagttagctctgtccagcaatcctttgaccatcattcctgactataggaccaaagtactg
gcaatatttggggatagagcctccgaggtatgtttggataatactgtcaccacagagaaa
gaactggacactgtagaagtgttgaaagcgattgaaaaagcaaaggaagcaaagaataaa
gcaaataacgctaataaaaaactcagtgaggactctgccaccagctccagctcatctctt
aatgctcgttcttcctctccttctctgcctcgtcctattagctccagccaagaaatagtt
tgtatagaagcagctatagtcagcagtttgtcttcacctagtagtttgattcctactgat
cctacagctaccctaagatgctcagaagaaacggattctggaagtggaggagaaggacag
acatctacttcagacatagatggacacacaggagatctttccacaagttctgagtgttcc
caggaaaatccttgccctcaaaacaccattatcctaccattttcctgcgtatcttacact
gccaccaaccaggattttatccatcacctctccaactcgattgctcaagcattacgtagg
ccacctcattcattcacagacggggaatatgaagggagtctcacaagtggccccagagtt
acagagcttgaggatggctattttgaaatgggacttcataaaggagaacagccagaatgg
aatgtggcatcagatgtggctcagacggtggctagaagccctggagatcaagtccacata
gtcaaagttctttggagcttttctattcatatttataaaggaatccatcagtttgcttct
tgtcttgtgctgactgatgatgtgctggctgtgtttgagattcctaaacatgaatcacag
gataaccacctgcccaacctttccgctgtgaaactagccttgtgctttccatatactgac
ctggcggagttcggttttctggtgccagaaatgtgcttaacactcaaaacgcgatgtctt
gtgagctgcctctttgtactctctgagccccaaaacctgcaggatttttattactcttta
caaatgctcgtctctcaggcttgcacatccatgccgcctgggattatgccatatagtgtc
aaaatgagtctacaagaatttgtcttccagctggaaggtttccatcatgttgcctcaaat
gatgctgagataaaaggatgttttccagtctgtctatttcagagcaaccccaatgatctc
cagtcacaatcggctactgccaggacggtgtgggccaaaaatgcctggttctatacccta
tattcgacagtctatgattcaaccaaaggtagtccatatattctacttccttgttggata
tttttcacatctcagtatttgtatgtactaaaggccaactttcatgtgctatttgataag
agcttagactcagaaggtgtgttaaatgctttcagcctcaataggattcctctggccttg
gttcttttgcgtcccttccacagctctgcccagaagaagggatcgttctcggatggccac
atcctccagctacttatcggatacagatttgtgactgcagtgtttcttctgccccatgaa
aagtttcactttctaaaagtttacagcctcttgaggacttttctgcaggatgtcaaaact
atcatcattttcaaaggttcaaaaagtccggacactgtccaaaatcatctgccggatacc
agtaatagacaggcccaggcaacaagtttttacaagcctcgtttgaccctgtcggctatg
tatccttctgaatttctgctgcagaaacttactgaagaaaaccaaattccactttacctt
tcagtttcctcatctcttctctatgtggctggactgaaaggcagtaccattgttgagttt
ttccatagcaatgttgctgaggtggaaaatgaagaattgaggcacctcatgtggtcttct
gttgtattttataaaactccagatgtggaagtgactgtttgtgttttactctccacaaaa
gcggtctactttcttctggatgactcggctgttccttctaacgagcaccaccagcaggat
ttctggaaccaaaaaccttccagttttgaaagcagttctttctgtctttcctattgtctt
gttctaaaacttaatgatttgcagtcggtgaacattggacttttcgatcagtattttcgg
attgctgggccctctgcagatcatgtggtgacctgcttaactagagacagttacagcacc
catgctttcatccagcatctcatgactgtgctctcattgctggcgcgtgcgccatcacca
gaaccagcagaaaaagatttctactctgagtttgggagaaaaactacaggaaaaatggaa
aattatgaaatgattcattctagtagagtgaagtttatttatccaaatgaggaagaaatt
ggcgatctcactttcgtagtaacagagaagatggctaacttgtctaacatgcaatcccta
aatatcctactctacgtgttggcttttcaagtgaatactattgatggaacaccacaagga
agtacctcacttcagtcaaaaacactcattttaaccagctctgctttgttcctcttcagt
gaggattatatcagctacccactgccagactttgcaaaagagcctccaaagaaggataag
taccagctgacagatggaaggaggatccgggacttagacagagtgcttatgggatatcag
ccctatcctcaggctctcacctttgtgtttgatgatgttcagaatgaagatctgatgcaa
aacctgaccctggatcattttggagaaactctgaacagccctaagagagatacccggagg
gacaatgaggttcagtggtacatcttcattccaagcgcagattgccgggagagattaatc
tcacttcttgcaaggcaatgggagattctttgcggaagggagctcccactggaactcact
ggttag
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