Geotrypetes seraphini (Gaboon caecilian): 117351233
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Entry
117351233 CDS
T09159
Symbol
POC1A
Name
(RefSeq) POC1 centriolar protein homolog A isoform X1
KO
K16482
centriolar protein POC1
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gsh03036
]
117351233 (POC1A)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
gsh03037
]
117351233 (POC1A)
Chromosome and associated proteins [BR:
gsh03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
117351233 (POC1A)
Cilium and associated proteins [BR:
gsh03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
117351233 (POC1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_2nd
EIF3I
WDR55
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_Gbeta
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_EML
ANAPC4_WD40
Beta-prop_Aladin
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_EIPR1
Beta-prop_WDR75_1st
Beta-prop_WDR41
WD40_RFWD3
Beta-prop_SCAP
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_SPT8
Beta-prop_Vps41
Beta-prop_RIG_2nd
eIF2A
Ge1_WD40
Beta-prop_WDR35_TULP_N
Beta-prop_NWD2_C
Beta-prop_DCAF4
Beta-prop_HPS5
Tricorn_2nd
Beta-prop_DCAF12
RMC1_N
PROPPIN
Beta-prop_WDR75_2nd
Beta-prop_Nup120_160
Cytochrom_D1
Beta-prop_ACSF4
Nucleoporin_N
Motif
Other DBs
NCBI-GeneID:
117351233
NCBI-ProteinID:
XP_033782159
UniProt:
A0A6P8PE42
LinkDB
All DBs
Position
17:complement(38581281..38766562)
Genome browser
AA seq
446 aa
AA seq
DB search
MTSPLEDPSLERHFKGHRDTVTSIDFNANMKQLASGSMDSCLMVWNLKPQMRAYRFVGHK
DAIMSVQFSPSGHLVASASRDKTVRLWIPSVKGESTVFRAHTGTVRSVSFSSDGQSLVTA
SDDKTIKVWTVHRQKFLFCLSQHINWVRCAKFSPDGRLIVSASDDKTIKIWDKASRECTH
SFCEHGGFVNYVDFHPSGTCIAAAGTDNTVKVWDVRMNKLLQHYQVHNAVVNGLSFHPSG
NYLITASNDSTLKILDLLEGRLLYTLHGHQGPATCVAFSRAGDFFASGGSDEQVMVWKTN
FDIADYGDVLKTQRHDTNVNGSIPIMDGHFTPSYHNSAKVSATEKSEVDFVDLPANLEKS
KSPTEQHQVSQSTVSSNEQQVHHIENGIHPTLANTLEHIVGQLDVLTQTVGILEQRLTLT
EDKLKECLENQHRITLHIMQTNHEND
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgacttccccgttggaggatccatccttggaaagacattttaaaggccaccgagataca
gtcactagtattgattttaatgccaatatgaaacaattagcaagtggttctatggattct
tgcttgatggtgtggaacttgaaacctcagatgagagcctatcgctttgtgggacataaa
gatgctattatgtcagtccagttttccccttctggtcatcttgtagcatcagcttccaga
gataaaacagtccgtttgtggataccaagtgtgaagggagaatctactgtgtttagggct
cacacaggaacagtaagaagtgtcagcttctcttctgatggtcaatccctagtaacagcc
tctgatgacaaaaccattaaagtatggacagttcacagacagaagtttctgttttgcctt
agccagcacataaactgggttcgctgtgccaaattctcccccgatggaagattaatagta
tccgctagtgatgataaaactatcaagatttgggataaagcaagcagggaatgtacacat
tctttctgtgaacatggaggatttgtaaattatgtggattttcatcccagtggcacttgc
attgctgcagctggtacagataacacagtaaaggtttgggatgttcgcatgaacaagctg
cttcagcattatcaagtacataatgctgtagtaaatggtctctccttccatccctctgga
aattacctaatcactgcatcaaatgattcaacccttaagattttggatctattggaagga
agactgctctatactcttcatggtcatcaggggccagccacttgtgttgcattttctaga
gctggggatttttttgcctctggaggatctgatgagcaggtaatggtatggaaaactaac
tttgatattgctgattatggagatgtcctaaaaactcagcgacatgatacaaatgtaaat
ggaagtattccaattatggatggtcatttcacaccctcgtatcataattctgccaaagtg
agtgctacagagaaaagtgaagtagattttgttgacttgcctgcaaatttggaaaagagc
aaaagtcctacagaacagcatcaagtatcgcagtcaacagtgtcttcaaatgagcaacaa
gtgcaccacatagagaatggcatccatccaacacttgcaaacacactagagcacatagta
gggcagttagatgttctcactcagactgtaggcattttagagcaaaggctgacgctaact
gaagataaactgaaagagtgccttgagaaccagcacaggattactcttcatataatgcag
accaatcacgagaatgactga
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