Geotrypetes seraphini (Gaboon caecilian): 117351249
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Entry
117351249 CDS
T09159
Symbol
STAB1
Name
(RefSeq) stabilin-1 isoform X1
KO
K19020
stabilin-1
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
117351249 (STAB1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
gsh00536
]
117351249 (STAB1)
Glycosaminoglycan binding proteins [BR:
gsh00536
]
Hyaluronan
Cell surface receptors
117351249 (STAB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fasciclin
EGF_3
Xlink
EGF_STAB1-2
cEGF
EGF
FXa_inhibition
EGF_TEN
EGF_MSP1_1
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
117351249
NCBI-ProteinID:
XP_033782191
UniProt:
A0A6P8Q4Y5
LinkDB
All DBs
Position
17:complement(37329911..37568802)
Genome browser
AA seq
2582 aa
AA seq
DB search
MWSPRLQLVINISLLVACSTSSTEAQEGKVKVGRYSVITTLNLTTECTTCAGTTSMPCPK
ESKKITEGVGNRDCSYTVNMGGETLFLLGCRHTCQKEIKESVCSEGFWGSACHECPGGYQ
KPCNSHGKCLDGITGNGACICEENYSGFACQECADENAFGPNCTSVCDCQHGICNGGISG
NGSCTCQAGYTGPKCDQELPSCQALNCGDNARCIEREDGSAICECMPGYSRRGVACQPGN
PCIPSPCSSLATCENLGQRQYRCSCKSGYQGDGKVCVAINPCMDNNGGCLENSTMCVYRT
PGRASCTCQPGMTMKSSNISDGCSFKKIIYYDPCEGRVKEKSSIDSLPFCICKEGEVGNG
KSCYGNIMTEVQKLNTQGIHTKKLTDALKLFETGCSLTLRKLGPFTVLVPMISTLKINEA
MTQRLCKLHIIPGQHLLTDLIRIKTLWTLAGEAVEFQNREWGDLVPHLNAFYVDFSFQSA
PEELYRIMYSNLPAANGIIHIINKPRTKIGTDMLGNKEISIGEILAKTEIFNRFETMLEN
CELPAILNGPGSFTVFVPSNAAVDTLRDGRLIYLFTQGKNKLQELVKHHIYTTAAVTVDK
LLSIPQILTMANEVVTINVTEDGRILLGDLGMPITGRDIVASNGIIHILDGVLIPSSIVP
ILPHRCDEVQHKVFMGPCGHCDSIPPCPSTSIDTNMTFSGCTYLAEIFHVRQLGCARYCN
QTSFKPGCCKGFFGPDCKPCPGGFSNPCFGRGTCADGMHANGSCICFKNFTGLACHICTN
PNKHGDKCDADCQCVHGVCDNRPGSRGVCRPDSCKAGYTGEFCDRRAEPCGPSTLSLYCH
QHAVCMSSGPSVRCSCANGYEGNGFSCQPIDSCRKPERGGCSINAVCTATGPGTATCQCN
EGWTGDGQVCVPIDNCASEGRGGCHINAECIFVQPGQNTCTCKASYAGDGILCDPVNPCL
ENNGGCHDLAECKFLGGGERICVCPDGFEGNGMACYGDVLAALYSNSDFAGFYQWIKKSR
FTVPEGSNVTALVPSEAAVKNLSKEEEDFWLKPYTLPFLVRAHFLRGSLTIEKLKQYDGQ
ELSTLNPRTKWEIRNNNSTVLIQNASVLIGDIPAINATIYIINKVLIPPLGDVPPPHPGL
RQQLDQIPSFTRFKESLQEYQLIDYLESSETKYTIFIPGNEAVSQYCNASNIQQLGNATM
KYHIILGQKLTHSDLKDGMHQVTMLGISFRVILYKRENQTYVNSISLDGTFLETNNGMLM
GLSQVLEIQKNRCDQQNTIVKRVKCKDCSKGMKCPPSLKEVSKRTPDCKYLKRGELFKGC
TFTCVASSIVPGCCPGYFGEHCLMCPGKDGNCSGNGICQDGVSGNGQCTCKEGFHGTACE
TCEAGRYGASCQSACSCSNGKCNDGLLGDGKCICYKGWKGRNCEVDIENDLCNGTCSDYA
NCFSGSPEWPTSSPPSCLCVAGYTGNGTFCTEIDPCVENNGGCSAHANCTKITAGERKCS
CRQGYTGDGIVCLEIDGCSENNGGCHQRAQCTKTGPNLVACNCRTGYSGDGKEKCEPINL
CKENNGGCSPFAICINFHPGIRTCICKQGAFGDGITCMGTISLELAHDPAAASIFKQLKV
NSITDLVDKRTYTIFVPHQDAVGNSTVFEEWKKKNLTENLILYHIVGCDQQLLVSDLQNL
KSITSLSGEKIKISVKEDGIYLNDKAKIISEDNRKANGIVHFIDNVLLPTDYQNQTLLPL
VYQQNITEAAKSYGYTIFSKLLEDANLLAIVNDPIHKYFTMLWPTDEAFKSLPQERQKWL
YHEEHRDKLAAYLKFHMIRQMKVRAVNLPFTTEMKTMYGSTIWIRCSKTSIGDLIVEDQN
ARIVQRNMEFSNGIAHGIDQLLEPPNLGAHCDEFHTVETDSLCGHCLFPHPCRHGSVEKG
ETKACYYADSRRTLFSPFFRPWEPSLRPLGYHNKIVGGCKRSCYTSKWVPKCCKNHYGSD
CRVCPGGLETPCSDRGTCNDGISGSGACSCKDGFNGTACELCTSGRFGPDCEKCKCTENG
ECNEGISGDGSCFCSTGWKGQYCEDKLEAQPVCSPACDVNASCRSENVCECHPYYEGDGR
TCTEIDRCQDENGGCSEHANCTQRGINVFCMCFLDYEGDGHICRPIDRCADGRNGGCSEH
AACISIGPNSRRCECREGYVGNGVQCLEKAIPPVDRCLEMNGDCHPEAICLDLHFQEKTA
GVFHLQSPKGKYKFTYDEAVTGCAAEGASLATLKQLAAAQQMGFHLCLVGWLDNGTAGYP
TTYPNPSCGSNHVGITDYKIRSNLSETWDAFCFRVQDVQCICRYGYVGDGNYCNGNLLEV
LATNSNFSIFYLILLDYANATEQGDEFLNFLYNETSYKTLFVPLDSGFEENVNLTWRDLE
HHVSMSNTFLSSINLTDGCVLPSRLGYNLSIADCTSINCVGFPASKLVNDKVIVEWDILT
FNGIIHAIEGPLTAPTEPVINALKYPQMLTGAVTAAVAIAFLLLAAIIMSCYYFKLRNRN
FQFRYFQAQMDEGEVFTREDVNPPLVSIPNPVYGPNSSFSETFDEIFDYDNFSDTQRILE
DD
NT seq
7749 nt
NT seq
+upstream
nt +downstream
nt
atgtggagccctagactccaactcgtcatcaacatttctcttcttgttgcatgttcgaca
tcctctactgaagcacaggaaggaaaggtgaaagtaggacgttacagtgttataaccaca
ctgaacctgaccacagaatgtaccacctgtgctggaactacctcgatgccatgtccaaaa
gaaagcaagaagattacagagggcgtggggaatagagactgcagttacacagtgaacatg
ggaggtgaaaccctcttcctcctgggctgcagacacacttgtcagaaagaaataaaggaa
tctgtatgttctgaagggttctggggatcagcatgtcatgaatgcccgggtggatatcag
aagccttgtaatagccatggtaaatgcctggatgggataacagggaatggagcctgtata
tgtgaggagaactatagcggctttgcatgtcaagaatgtgcagatgaaaatgcatttggt
cctaactgtacatcagtgtgtgattgccaacatggcatctgtaatggtggaatctctggt
aacgggagctgcacctgccaggcaggatatacaggtccaaagtgtgatcaagaactgccc
tcgtgtcaggccttaaactgtggcgataacgctcgttgcatcgaaagggaagatggcagc
gctatatgtgaatgcatgccaggttacagccgccgtggtgtcgcatgtcaacctgggaat
ccctgtataccctcaccttgctcctctctagctacctgcgaaaaccttgggcaaaggcaa
tatagatgcagttgcaaatctggctaccaaggagatgggaaagtttgtgtggcaatcaat
ccttgcatggacaataatggtggctgccttgaaaattcaaccatgtgcgtttatagaact
cctggcagagcttcttgtacttgtcagcctgggatgaccatgaaaagcagtaacatctct
gatgggtgctctttcaaaaaaataatctattatgacccttgtgaggggagagtaaaagaa
aaatcatctatagattcactacctttttgtatctgtaaagaaggagaggttggaaatggc
aaaagctgttacggaaatatcatgactgaggttcagaagctgaacacccaaggaattcat
acaaagaagctgaccgatgctctgaaattatttgagacaggctgttcactaacgctgaga
aaactggggcctttcacagtcttggttcctatgattagtactctgaaaataaatgaagcg
atgacccaacgtttatgcaagctgcacatcatccctggccaacatctattgacagattta
attagaataaaaaccctgtggacactagctggagaagcagtggagtttcagaacagggaa
tggggagatctggtccctcatttgaatgctttttatgtggactttagtttccagtctgca
cccgaagaattatatcggattatgtattcaaacctaccagctgctaatggcataatccat
attattaataaaccacggacaaaaattggcacagacatgctagggaataaggagatcagc
attggagaaattcttgccaaaacagagatcttcaacagatttgaaactatgctggagaat
tgtgagctgcctgcaatattaaacggaccaggttcttttactgtgtttgtgcccagtaat
gcagcagtggacactttaagagatgggagacttatctacctcttcacccagggaaaaaat
aaactgcaagagctagtaaagcatcatatctacaccacagcagccgtgacggtggacaag
ctactttcaataccccaaattttgaccatggctaatgaagtagtgactatcaatgttaca
gaggatggcagaattctcttgggagatttgggaatgcccataactggaagagatattgtt
gcatccaatggcatcattcatattctggatggtgttctcattccttcctccattgtccct
atcctgcctcatcgatgtgatgaagtccagcacaaggttttcatgggtccgtgtggtcac
tgtgattccattcctccctgtccctccaccagcatagataccaatatgacatttagtgga
tgtacctacttagcagagatcttccatgtccgtcaactaggttgtgccagatactgcaac
caaacttcttttaaacctggttgctgcaaaggattttttggtcctgactgcaaaccatgc
cctggtggattctctaatccgtgttttggccgaggaacttgtgctgatgggatgcatgca
aatggcagctgtatttgcttcaagaatttcacaggcctggcctgtcacatctgtacaaac
ccaaacaagcacggagacaaatgtgatgcagattgccagtgcgtacatggagtctgtgat
aatagaccaggaagtcgaggggtgtgtcggcctgattcttgcaaagctggatacacagga
gaattctgtgacagaagagcagaaccttgtggcccatctaccttatccctttattgccat
cagcatgctgtctgcatgtctagcggaccctccgtaagatgttcctgtgcaaatggatat
gagggaaatggtttctcctgtcaacccatagattcgtgcaggaagcctgagagaggcggt
tgctctataaatgctgtgtgtactgctacaggtcctggtactgccacctgtcagtgtaat
gaaggctggacgggggatggacaagtttgtgtccctatagacaactgtgcttcagaaggc
agaggaggctgtcatatcaatgcagaatgcatttttgttcagcctggacagaacacgtgc
acatgtaaggcaagctatgctggggatgggattttgtgtgaccctgtgaacccatgcctg
gaaaataacggtggctgccatgatctggctgaatgtaaattccttggagggggtgagagg
atctgtgtttgtcctgatggttttgaaggcaatggaatggcatgctatggagatgttcta
gcggcactgtacagtaactccgactttgcaggcttttatcagtggataaagaagtctcgc
ttcacagtcccggagggaagtaatgtaacagccctggtgccatctgaggccgctgtgaag
aatctgagcaaagaggaggaagatttctggctgaagccttacacgctaccattcctagtc
agggcacattttcttcgaggctcccttacaattgagaagctcaagcagtatgatgggcag
gaactatctacgcttaatccccgcaccaaatgggaaataagaaacaacaatagtactgtc
ctcattcagaatgcgagtgttctcataggtgacattcctgcaatcaacgctaccatttac
attattaacaaggttttgatcccacccttaggagatgtcccaccaccccatcctggcctg
cgccaacaactggatcagattccatcattcacacgttttaaggaatcgctccaggagtat
cagctgattgattaccttgagtcctcagaaaccaagtacactattttcattccaggaaac
gaggcggtgtcgcagtattgtaatgcttcaaacatccaacagctgggtaatgccactatg
aaatatcacattatcttggggcaaaaactgacccattcagacctgaaagatggaatgcac
caggtgaccatgttgggcatttctttcagagtcatattgtataagagagaaaaccagacg
tatgttaatagcatctctctggatggcacttttttggaaaccaacaatggaatgctgatg
gggctatctcaggttctcgaaattcagaaaaatcgctgtgaccagcagaacacaatagtt
aaaagggtcaagtgcaaagactgtagtaaagggatgaagtgcccacctagtctcaaagaa
gtttccaagagaacacctgactgtaaatacctgaagaggggcgaactatttaaaggttgc
accttcacctgtgtcgcttcatctatagtgcctggttgttgcccaggttattttggagag
cattgcttgatgtgtccggggaaggatgggaattgttctggtaatggcatttgtcaggat
ggcgtatccggaaacgggcagtgcacctgtaaagaaggcttccatggcacagcttgtgaa
acctgtgaagctggtcgatatggagccagctgtcaatcagcatgttcatgtagcaacggg
aaatgcaatgatggccttcttggtgatggaaagtgtatttgctacaaaggctggaaggga
cgtaattgtgaagtagatattgaaaatgatttgtgcaatggcacctgcagcgactacgcc
aattgcttttcaggatctccagagtggcccaccagtagcccacctagttgcctgtgtgtt
gctggctacactggaaatggaaccttttgcacagaaattgatccttgtgttgagaataat
ggcggctgctcggcccatgcaaattgtacgaaaatcacagcaggagagaggaaatgctct
tgtcgccagggctacactggcgatgggattgtgtgtctggaaattgatggctgctctgag
aacaacggaggctgtcatcagagggcacaatgtacgaaaactggccccaatttggtggcc
tgcaattgtcggactgggtacagtggtgacggaaaagagaaatgtgaacccattaatctt
tgcaaagagaacaatgggggctgcagtccttttgctatttgcataaattttcaccctgga
attcgaacgtgtatctgtaaacaaggcgctttcggggatggcatcacctgtatgggcaca
atctctctggaactggcccatgatccagcagcagcctccatctttaaacaactgaaggtc
aacagcatcacggacttagttgacaaaagaacatacaccatcttcgttcctcatcaagat
gcagttggtaacagcacagtgttcgaagagtggaagaagaagaatctcacggagaatttg
attctctatcacatagtaggatgtgatcagcagctgctggtcagtgatctgcaaaaccta
aagtccatcacttccttatcaggagaaaaaatcaagatttctgtgaaagaggatggcatc
tatttgaatgataaggcaaaaataattagcgaggacaatcgtaaagccaatggtattgtc
catttcattgacaacgttttgcttccaactgattaccagaatcagactctacttccccta
gtgtatcagcaaaacattactgaagctgcaaagagctatggatacacaatatttagcaag
ctacttgaggatgcaaatctgttggccatagtgaatgaccccattcacaaatacttcacg
atgctctggcccacggatgaagcatttaagtccctccctcaagagaggcagaagtggctc
taccatgaagaacaccgagataagctcgctgcctacctcaagtttcacatgatcagacaa
atgaaggtaagagctgtaaatctgccatttaccactgaaatgaagaccatgtatggctcc
accatctggattcggtgcagcaagaccagtattggggatcttatagtggaagatcagaat
gcaaggatcgtgcagagaaacatggagttcagcaatgggatcgcacatggtattgaccag
ttgttggagcctcctaacctgggagcacattgtgatgaatttcacactgtggaaactgat
agtctttgtggccattgtcttttcccacatccttgtcgtcatggatcagtggaaaagggg
gaaacaaaggcctgctattatgctgacagtaggcgaacattattcagccctttttttcgg
ccctgggagccctcattgaggcctttgggatatcataacaaaatagtcggtgggtgcaag
aggagttgctacacctcaaagtgggttcccaagtgctgcaagaaccactacggaagcgat
tgtcgagtgtgtccaggaggtcttgagactccctgcagtgatcgtgggacgtgcaatgat
gggataagtgggtcaggagcctgcagctgtaaagacggtttcaatggaactgcttgcgaa
ttgtgtacatcgggtagatttggaccagactgtgaaaaatgtaagtgcactgagaacggg
gagtgcaatgaaggaatttctggagatggttcctgcttttgctcaactggatggaaaggg
cagtactgcgaagataaactagaagctcaacccgtgtgctccccggcctgtgatgtcaat
gccagttgccgatctgagaatgtttgcgagtgccatccgtattatgaaggcgatgggaga
acgtgcacagagattgaccggtgccaggatgagaatggaggctgcagtgaacatgccaac
tgtactcagcgtggcataaacgttttctgcatgtgtttcctggactatgaaggagatggt
catatctgcaggcccatagaccggtgtgcagatggcagaaacgggggttgcagtgagcat
gcagcgtgcatcagtattggtccgaacagtcgaaggtgtgagtgtcgagaaggttatgta
ggtaatggcgtccagtgtctggagaaagccattcctcctgtggatcgctgcttagaaatg
aatggggactgccatcccgaggccatttgcttagacctccactttcaagaaaaaactgca
ggtgtgttccatctgcagtcgccaaaaggcaaatacaagttcacttatgacgaggctgtc
actggctgtgctgctgagggagcttcattagcgacgctgaaacagctggctgctgcccag
cagatgggcttccatttatgcttggttggttggctcgataacggcacagcgggctatcca
acaacgtatcctaaccccagctgtggctccaaccatgttgggattacggactataagata
cgaagtaacctgagcgagacgtgggatgctttctgcttcagagttcaagatgtgcaatgc
atctgtcgctatggctatgtgggtgatggaaactactgcaatgggaacctcttggaagtt
ctggctacaaattctaacttttccattttctatttgatattgttggattatgccaatgcc
actgaacaaggggatgaatttctcaacttcttgtacaatgaaacatcctataaaactctt
tttgtaccactggattctggatttgaagagaatgtgaatctaacatggcgagatcttgag
catcatgtctctatgagcaataccttcctctcctctataaacttgactgacgggtgtgtt
ctgccctccagactgggatacaacctctccattgcagattgtacctccattaattgtgtt
ggatttcctgcttccaagctggttaatgataaagtgattgttgaatgggacatcttgaca
tttaatggaattatacatgccatagaaggacctttgactgcacccacagagcccgtgata
aatgcgttgaagtaccctcagatgctgacaggagctgtgacagctgctgtggccattgct
ttcttactactcgctgctattatcatgtcctgctattatttcaaactaagaaacagaaat
ttccagttcagatactttcaggctcagatggatgagggagaggtatttaccagagaagat
gtgaatccacccctagtgtctataccaaatccagtttatgggcccaacagctcattctca
gaaacatttgatgagatctttgactatgacaatttttcagacactcagaggattcttgag
gatgactga
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integrated database retrieval system
