KEGG   Geotrypetes seraphini (Gaboon caecilian): 117351385
Entry
117351385         CDS       T09159                                 
Symbol
RRP9
Name
(RefSeq) U3 small nucleolar RNA-interacting protein 2
  KO
K14793  ribosomal RNA-processing protein 9
Organism
gsh  Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:gsh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:gsh03009]
    117351385 (RRP9)
Ribosome biogenesis [BR:gsh03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    117351385 (RRP9)
SSDB
Motif
Pfam: WD40 WD40_Prp19 Beta-prop_TEP1_2nd WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 WDR55 EIF3I Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_IFT122_1st NBCH_WD40 WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_SCAP Beta-prop_IFT140_1st Beta-prop_DCAF12 ANAPC4_WD40 Beta-prop_IP5PC_F Beta-prop_SPT8 Beta-prop_DCAF4 Beta-prop_Vps41 Beta-prop_RIG_2nd Beta-prop_HPS5 Beta-prop_WDR75_2nd Beta-prop_WDR19_1st WDR54 WD_LRWD1 Beta-prop_Nup120_160 VPS8_N WD40_like
Other DBs
NCBI-GeneID: 117351385
NCBI-ProteinID: XP_033782503
UniProt: A0A6P8Q5P8
LinkDB
Position
17:41421130..41479908
AA seq 470 aa
MSSFFLKKKPRKGGLGEARGAGKRRRPNEGEGKPRKKAAPPLNEEISSDSGTESPAAEKR
KRRLAEDEEIEETAQEKKLRLAKSYLEQLRQQEEEKAEEEAFQQDLVASRLEEEVLEQKG
KLQRLVAKDLQPPDVTEIRTLRGHQRPITCLVISPDDQHIFSAAKDCTIIKWDVCSGKKL
CVIPRGQKGAKDQHGHTAHILAMAISSDGKYLATGDKNKLILIWETETCRHLYTFPGHRD
AVSALSFRKGTHQLYSASNDRSLKVWNVAENAYVETLFGHQDAVMGMDSLSRERCVTAGG
RDGTVRVWKIAEESQLVFHGHDGSIDCIQLINEEHMVSGADDGSVALWSVSKKKPLAMVK
QAHGVHGDHGLEQPYWISSVSAMLNSDVVATGSHNSNIRMWQCGEGFRSLKALFDVPLMG
FINSLKFSNVGDFLVAGVGQEHRLGRWWRIKEAKNAVYIIPLKRVPPEQS
NT seq 1413 nt   +upstreamnt  +downstreamnt
atgtcctcttttttcctaaagaaaaaaccgcgcaagggtggacttggggaggctcgtggg
gccggcaagaggcggaggccaaatgagggagaagggaaaccacggaagaaggctgcaccc
ccgctgaatgaggagatctctagtgattcagggacagagagtcccgcagcagagaagcgg
aagcggaggctcgccgaggatgaggagattgaagaaacggctcaggagaagaaactgagg
ttggcgaagagttacttggagcagcttcggcagcaggaagaagagaaggcagaggaggaa
gctttccagcaagatctagttgcaagccggctggaggaggaagtgcttgagcagaaagga
aaacttcagcgacttgttgccaaagatttgcagcctccagatgtcacagagatccgaacc
ctaagaggacaccagcgacctatcacctgcttggtcatttctcccgatgaccaacacatc
ttctcagcagccaaagactgcaccattatcaaatgggatgtatgctctggaaagaagctt
tgcgtgatcccacgaggacagaaaggggcaaaggatcagcatggccatacagcacatatc
ctggccatggctatctcatcggatgggaagtacctggcaacgggcgataaaaataagctg
atcctgatttgggaaacagagacatgcagacacttgtacacattcccaggccatcgagat
gctgtttcagcactttcgtttcggaaaggcactcaccagttgtatagtgcctctaatgac
cgctcccttaaagtctggaatgtggccgagaatgcctatgtggaaactctgtttgggcac
caggacgcggtgatggggatggatagcctaagccgggagcgttgtgtcacagctggtggc
agggatggcactgtccgagtctggaagattgctgaggaatcacagctggtgttccatggg
cacgacggctccattgactgtatccagctgataaatgaagaacatatggtgtctggagca
gacgatgggtcagtggcactctggagcgtgtccaagaagaagccactggcaatggtgaag
caagcacacggtgtccatggtgaccatggtttggagcagccctactggatttcttcggtg
tcagctatgctgaatagtgatgttgtagctacaggctctcataattctaacattcggatg
tggcagtgtggtgagggattccgcagcttgaaagcactctttgatgtccctctgatgggt
tttatcaacagcctgaagttcagtaatgtaggcgatttccttgtggctggagtaggacaa
gagcacaggttggggcgttggtggcggattaaagaagccaagaatgcagtgtacataatc
cccttgaagagggtaccacccgaacagagttaa

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