Geotrypetes seraphini (Gaboon caecilian): 117351397
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Entry
117351397 CDS
T09159
Symbol
TLR9
Name
(RefSeq) toll-like receptor 9
KO
K10161
toll-like receptor 9
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04620
Toll-like receptor signaling pathway
gsh05132
Salmonella infection
gsh05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
117351397 (TLR9)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117351397 (TLR9)
09171 Infectious disease: bacterial
05132 Salmonella infection
117351397 (TLR9)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
gsh04054
]
117351397 (TLR9)
04090 CD molecules [BR:
gsh04090
]
117351397 (TLR9)
Pattern recognition receptors [BR:
gsh04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
117351397 (TLR9)
CD molecules [BR:
gsh04090
]
Proteins
117351397 (TLR9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
TIR
LRR_9
LRR_12
TIR_2
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
117351397
NCBI-ProteinID:
XP_033782518
UniProt:
A0A6P8Q5R1
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All DBs
Position
17:complement(39003749..39006835)
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AA seq
1028 aa
AA seq
DB search
MGYVLILTRTLCSVSGSLLEFLPCQRNGSSGIDCVDHGLDTVPSFSPLQGQNITSLNLMY
NRLQFLRMSAFASFPNLIQLNLKWNCPPQAMRSDFYMDCRLTIEPRTFMPLQRLAYLDLS
ANSLQDIPSLPSSLKYLSLTRNLILTLDASALSHLQNLRELYMDGNCYYKNPCASSLKIS
SGALSQLSKLKHLSLKYNNMSDIPRNLPPSLNSLYLSYNRITWISRDSFRDLVNLRVLDI
GGNCRRCDHASNPCVNCNGSLHLDHDSFLILRNLEGLVLRDNSLYHLDPQLFQSMSNLRV
LDLNENFLYDVIRSGTVFEPLKKLKKLFLSFNYHKRLIFDRLILAPSFRHLESLKELRID
GLFFRAVNEESIQPLVRLRNFTRLSLQLNFISQINVSVFGNLPSLLQIYLSDNGIISPYH
RKTVPAVSTSEHTPSITGQQPWSPETCFISSLASEKSPSMKRQFLQAPYFLPSCSFYQKT
LHLARNNLVTITPEMFKNLTDIDCLQLSFNSISQTVNGHQFTGLNKLKMLDLSHNKINLY
FNSAFSELPQLETLDLSYNSYHFQMTGIGHRLTFISQMKALTFLNLAYNKIANRITTELH
SDSLQVLLFDGNLLNTMWQHGDLYLKFFFHLTNLTKLDISNNYLRVLLPKTFANLPKALK
ILIVKQNLLASFNWTCLALLPKLNVLDLSANKLASLSNTSNLSAASLQNLDLSYNHIDRI
GQHFFVNAPALILLNLSYNSLQEVNKDWFGESLQHLDLRGNPLLCTCDSIFFEFILSTNI
QIPDLTNKVTCGSPYHLKNKSVFSRDLHFCPDDQISLCLFSISMLSIFLLMMGSTLKHFL
GWDVWYTFYICLASLCVLSSKSNDSEEYDAFIAFDKTQSDVADWVYNDLQVRLEEKGLRR
FRVCLEDRDWIPGKSLVENLWDSVYRSKKTVFVLSQVKPVSGLLRVAFLLVQQRLLEEQK
DVVVFVLLERLRRRSRYLNLRRRLCRKTVLFWPQDPCGQQYFWGQLRRVLEKDNHAFYDQ
NFKVGVQD
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atgggatatgtccttattctgacacggactctgtgttccgtcagcggcagcctgctagag
ttcctgccgtgccagaggaatggctcatctggaattgactgtgttgatcatggcttagac
actgtcccttccttttcgcccctacagggacaaaatatcacctctctaaacctcatgtac
aaccggctccagttcctgcgcatgtcagcctttgcttcctttccaaatctcatccagctg
aatctgaagtggaactgtccacctcaggcaatgagaagtgatttttatatggactgtaga
ctgacaatagagcccaggacattcatgcccttgcagcgtttggcatatctagacctttct
gccaatagcttacaggacatcccctcccttccttcttccctgaaatacttgagcctgacc
cgcaacctcatcctgaccctggatgccagtgccctttctcacttgcagaacctgagagag
ctgtatatggatggaaattgttactacaaaaacccatgtgcctcctctttgaagatctcc
agtggagctctctctcaactgagcaaactcaaacacctctctctaaaatacaacaacatg
agtgacatccctagaaacctgccccccagcctgaacagcctctatctctcttacaatcgg
attacttggatctctagagacagctttagggatcttgtaaaccttagggttttagacatt
ggtggtaactgcaggagatgcgatcatgcatccaatccctgtgtgaactgcaatgggtcc
cttcatctggaccatgactcttttctcattctgaggaacctggagggcttagttctgagg
gacaactccctgtatcatctggatccgcaactctttcaatccatgagtaacctcagggtc
ctggacctaaatgagaacttcttatacgatgtgatcagaagtggcacagtctttgaacca
cttaaaaagctgaaaaaacttttcctgtcatttaattatcacaaaaggctgatcttcgat
cgcctgatcttggctccttcattcagacacttagagtcactaaaggaactaaggattgat
ggtctcttcttcagagctgtaaatgaggagagcatccagcccctggtacggctgagaaat
tttacgaggctctctctgcagctcaacttcatcagccagatcaatgtatctgtatttggg
aacttgccttcattactccagatctacctgtcagataacggaatcataagcccctaccac
agaaaaactgtcccagctgtatccaccagtgaacatactccaagcataactggccagcag
ccatggtctcctgagacttgttttatttcatcactagcatcagagaaaagtcccagcatg
aaaaggcagtttctccaggccccatactttttgcccagttgtagtttctaccaaaaaacc
ctgcatttagcaaggaacaaccttgtcaccatcacgcctgaaatgtttaagaatctgaca
gacattgattgcctccagttatccttcaatagcattagccagacagtcaacggccatcag
ttcactggcttaaacaagctaaagatgctagatctgtctcataacaaaataaatctttac
ttcaactcagccttctcagagctccctcaactggaaactctagacttgagttacaacagt
tatcatttccagatgacaggcattggtcaccggttgacctttatttctcaaatgaaggct
cttactttcctgaacctggcttacaacaaaattgccaaccggataacaacagagctgcac
agtgattcattacaggttttgctctttgacggaaaccttttgaacactatgtggcagcat
ggggacttgtaccttaagttcttcttccacctgactaacttgaccaagttagatatttcc
aacaattatctgcgagttttgcttcccaaaacctttgccaatcttcccaaagccttgaag
atactaattgttaaacaaaacctgcttgcgtctttcaactggacatgtctggcactactc
cccaagctgaacgtattggatctgagtgcgaataaactggcatctttgtctaacactagc
aacttgtctgcagctagtcttcagaatctggatttgagttacaatcacattgaccgtatt
ggtcaacacttttttgtgaatgcaccagcactgatccttttaaacctaagctacaattca
ctgcaagaggttaataaggactggtttggggaatctttgcagcaccttgatttgagaggc
aaccctttgctctgtacctgtgattccattttctttgagttcattctgagcaccaatatt
cagattcctgatttgacaaacaaggtcacttgtgggtctccttaccacctaaaaaacaaa
agtgtctttagtcgagatttacatttttgtcctgatgatcagatctctctttgcttgttc
agcatctccatgctatctatttttctccttatgatgggatccaccctgaagcacttctta
ggttgggatgtttggtatacattctacatctgcttggctagtctttgcgtcctttcctcc
aaatccaatgactcagaggaatatgatgcattcattgcttttgataaaactcaaagcgat
gtggctgattgggtctacaatgacctacaggtccgactggaggagaaaggtctacgccgc
ttcagagtatgcttggaagacagggactggattcctgggaagtctttggtggaaaacctt
tgggattcagtatataggagcaagaaaacagtgtttgtgctgtcccaagtgaagccagtt
agtgggcttctgcgggtggctttcctgttggtgcagcaacggctgctggaagagcagaag
gatgtagtggtgttcgtccttctggaacggctgaggaggagatcccgctacctgaatctg
aggaggcgcctgtgtagaaagacagtcctcttctggccccaggacccctgtgggcagcag
tacttctggggccagcttcgaagggtgctggaaaaagacaaccatgcattctatgaccag
aacttcaaggtgggagttcaggactag
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