KEGG   Geotrypetes seraphini (Gaboon caecilian): 117351598
Entry
117351598         CDS       T09159                                 
Symbol
LARP1
Name
(RefSeq) la-related protein 1 isoform X1
  KO
K18757  la-related protein 1
Organism
gsh  Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:gsh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gsh03019]
    117351598 (LARP1)
Messenger RNA biogenesis [BR:gsh03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     117351598 (LARP1)
SSDB
Motif
Pfam: LARP1_HEAT La SGP DUF5320
Other DBs
NCBI-GeneID: 117351598
NCBI-ProteinID: XP_033782990
UniProt: A0A6P8PMR9
LinkDB
Position
18:complement(18921323..19073376)
AA seq 1038 aa
MATQVKALAPSNPLPPGNEPGLAGKLAKSNDGPGEKRQPDEGLGPKEAAAEARTPSSKQQ
KEDSNQLQKESLQQQQQQEEGGEQGPGRKEFIEAPPPKVNPWTKHTAGPCVTVNGQALPE
AVAPAKVVRAGNPRPRKGNKVSDFGDALNWPTPGEIAHKSIQPIRKLPIKKDMKEQEKVD
SREGKENQRVRSDESGEEKNGDEDSQKSSQKKKGNKHKWVPLQIDMKSEVPREKTATRNN
RQNEQHRHPINRSEPKGWHPDNKHERDWPDHDDTSSVKSEGAVRGGFRGRGRGRGRGRGR
GRGGTRSHFDYQYGYRKFDGQDGPHAPKYTSNITYYYDNVSSSELYSVDQELLKDYIKRQ
IEYYFSVDNLQRDFFLRRKMDTEGFLPISLIASFHRVQALTTDIGLIIKALKDSKVVEMI
DQKIRRKEQPDKWPLPGPLMSDATQTDFSQLINCPEFVPRQSFQKETESAPGSPRASSPV
ATKTEEVTNLKTMPKGLSASLPDLDSETWIEVKKRPRPSPAKPKKPEETKSPQPQKPAKD
QDEPEELDFMFDEEMEQMDGRKNTFTDWSDEDSDYEIDDHDVNKILIVTQTPPYLRKHPG
GDRTGNHTSRAKMSSEWAKVINDGLYYYEQDLWTEQFEPEYSQIKQEVENFKKVNMISRE
QFDTLTPEPPIDPNQEVPPGPPRFQQVPTDALANKLFGAPEPSAIARSLPTTVPESPNYR
NARTPRTPRTPRLKDPTLTPRFYPVVKEGRTIDAKTPRKRKTRHSSNPPLECHVGWVMDS
REHRPRTTSVSSNASPSESTPALSNYGCTPQSLPKFQHPSHELLKENGFTQHVYHKYRRR
CLNERKRLGIGQSQEMNTLFRFWSFFLRDHFNKKMYEEFKQLAVEDGKEGYRYGLECLFR
YYSYGLEKKFRADIFRDFQEETMRDYEAGQLYGLEKFWAFLKYSKAKNLTIDSKLQEYLS
KFRRLEDFRVDPPMSEEGSHRRHSSMMGAEGRRRYPSLSSSKASGQALPSKPTDETAKMP
NQHTSATAAVDSQTLGGK
NT seq 3117 nt   +upstreamnt  +downstreamnt
atggctactcaggtaaaggccctcgcgcccagcaaccccctcccgcccggcaacgagccc
gggctggcgggcaagctcgcgaagagcaacgacggcccgggggagaagcggcagcccgac
gagggcctcggccccaaggaggcggcggccgaggcgaggaccccgagcagcaagcagcag
aaggaggacagcaaccagctgcagaaggagagtttgcagcagcagcagcagcaggaggag
ggcggcgagcaaggccccggccgcaaggagttcatcgaggcccccccgcccaaggtgaac
ccgtggaccaagcacaccgccgggccctgcgtcactgtcaacgggcaggcgctgccagag
gctgtagctcctgctaaggtggtgagggcaggaaatccccggccaaggaaaggaaacaag
gtgagcgattttggtgatgccttaaactggccaactcctggagagattgcacacaagagc
atccagcccatccggaagctccctatcaagaaagacatgaaagagcaggagaaagtcgac
agccgtgaaggtaaggagaaccagagagtcaggtcggatgaatctggggaagagaagaac
ggagacgaggacagtcaaaaatcatcccagaaaaagaaagggaacaagcacaagtgggtc
ccactgcagattgacatgaaatcagaggtgccacgggagaagacagcgactcgtaacaac
cggcagaacgagcagcacaggcatcccattaacaggagtgaacccaaaggttggcatccg
gataacaaacatgagagagactggccagaccatgatgatacatcaagtgtgaagagcgag
ggagctgtgcgtggaggctttagaggtcgagggcgtggccgggggcgaggaagaggtcga
ggaagaggaggcactcgatctcattttgactatcagtatggctatcggaaatttgatggc
caggatgggcctcatgctccaaaatacaccagtaatatcacctattactatgacaatgtg
agcagctccgagctgtacagtgtggaccaggagctgttgaaggactacatcaagagacaa
atagaatattacttcagtgtggacaatctgcagcgagactttttcctacgtcgaaaaatg
gatactgaaggcttcctgcccatcagccttattgccagttttcacagagttcaggctctg
acaacagacattggactcatcataaaggctttgaaggacagcaaagttgtggaaatgata
gaccaaaagatcaggaggaaagagcagcctgataagtggcctttaccaggtcctctgatg
tcagatgcaactcagacggacttttctcagcttataaattgcccagagtttgtaccccga
cagagcttccagaaagagactgaatctgcccctggttccccacgagcctcaagccctgtt
gcaacaaaaacagaagaggttacaaatctaaagacaatgccgaaaggtttatctgctagt
ctaccagatctggactctgagacgtggattgaggtgaagaagaggcccaggccgtctcca
gccaaaccaaagaagccggaggaaacaaagtcaccacagccccagaagcctgccaaggac
caggatgagccagaggagctagacttcatgtttgatgaggagatggagcaaatggacgga
cgcaagaataccttcactgactggtcagatgaagactctgactatgagattgatgaccat
gatgtgaacaagatcctgattgtgacgcaaacgccgccatatttgcgtaagcaccctggt
ggagacaggacaggcaaccacacatccagggctaagatgagctcagagtgggcaaaggtc
atcaacgatgggctctactactatgagcaggacctatggactgagcagtttgagccagaa
tactctcagatcaagcaagaagttgagaacttcaagaaagtgaacatgatcagccgagag
cagtttgacactttgacccctgaacctcccattgatccaaaccaagaagtaccccctggt
ccaccacgttttcagcaagttccaacagatgctttggctaataaactgtttggagcccct
gagccatcagccattgctcgttcactgccaacaacagttcctgaatcacccaattaccgc
aatgccagaactcccaggaccccacgcaccccacggttaaaagacccaacactgacgccc
aggttttacccagtggttaaggagggaagaacgatagatgccaagacgcctcggaagagg
aagacacggcatagctcaaaccctccactggagtgtcacgtgggctgggtgatggattct
cgcgagcacagaccccgcactacttctgtcagctcaaatgcaagtccttcagagagtaca
ccagccctcagcaactacggctgcaccccccagtctctgccaaagttccagcatccctcc
catgagctgctgaaggaaaatggcttcacacagcatgtctatcacaaataccgccggcgc
tgccttaacgagcggaaacgattgggcattggccagtcccaggaaatgaacacgcttttc
cgcttctggtcattcttcttacgagatcatttcaataagaaaatgtatgaagagtttaaa
cagctggctgtggaggatgggaaggagggctacaggtacggtttggagtgcctattcagg
tactatagctatggtctggaaaagaagttccgagcagacatatttcgagattttcaggaa
gaaaccatgcgggattatgaggctggccagctttatggacttgagaaattttgggccttc
ttaaaatactccaaagccaagaatctgaccattgactccaaactacaggaatatctcagc
aagttccgccgcctagaggactttcgtgtggatccaccaatgagtgaagagggaagccat
aggagacattcttcgatgatgggagctgaaggcaggaggcgctacccatcactgtcttcc
agtaaagcctcaggccaggctttgcctagcaaaccgactgacgagactgccaaaatgcca
aaccagcacacctctgccacagcagctgtggattctcaaacactgggagggaagtag

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