Geotrypetes seraphini (Gaboon caecilian): 117351628
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Entry
117351628 CDS
T09159
Symbol
CYFIP2
Name
(RefSeq) cytoplasmic FMR1-interacting protein 2 isoform X1
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04810
Regulation of actin cytoskeleton
gsh05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
117351628 (CYFIP2)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
117351628 (CYFIP2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsh03019
]
117351628 (CYFIP2)
Messenger RNA biogenesis [BR:
gsh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
117351628 (CYFIP2)
Factors involved in mRNA localization
Other mRNA localization factors
117351628 (CYFIP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
Cypovirus_WIV_4
zf-CW
Spore_SspJ
Motif
Other DBs
NCBI-GeneID:
117351628
NCBI-ProteinID:
XP_033783075
UniProt:
A0A6P8PMY1
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All DBs
Position
18:complement(17261619..17373057)
Genome browser
AA seq
1253 aa
AA seq
DB search
MTTHVTLEDALSNVDLLEELPLPDQQPCIEPPPSSIMYQANFDTNFEDRNAFVTGIARYI
EQATVHSSMNEMLEEGHEYAVMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVEVLEPEVT
KLMKFMYFQRKAIERFCNEVKRLCHAERRKDFVSEAYLLTLGKFINMFAVLDELKNMKCS
VKNDHSAYKRAAQFLRKMADPQSIQESQNLSMFLANHNRITQCLHQQLEVIPGYEELLAD
IVNICVDYYENKMYLTPSEKHMLLKVMGFGLYLMDGNISNIYKLDAKKRINLSKIDKFFK
QLQVVPLFGDMQIELARYIKTSAHYEENKSKWTCTQSSISPQYNICEQMVQIRDDHIRFI
SELARYSNSEVVTGSGLDSQKSDEEYKELFDLALRGLQLLSKWSAHVMEVYSWKLVHPTD
KFCNKDCPGTAEEYERATRYNYTSEEKFAFVEVIAMIKGLQVLMGRMESVFNQAIRNTIY
AALQDFAQVTLREPLRQAVRKKKNVLISVLQAIRKTICDWDSGREPPNDPCLRGEKDPKG
GFDIKVPRRAVGPSSTQLYMVRTMLESLIADKSGSKKTLRSSLDGPIVLAIEEFHKQSFF
FTHLLNCSEALQQCCDLSQLWFREFFLELTMGRRIQFPIEMSMPWILTDHILETKEPSMM
EYVLYPLDLYNDSAYYALTKFKKQFLYDEIEAEVNLCFDQFVYKLADQIFAYYKAMAGSV
LLDKRFRAECKNYGVIIPYPPSNRYETLLKQRHVQLLGRSIDLNRLITQRVSAAMYKSLD
QAISRFESEDLTSIVELEWLLEINRLTHRLLCKHLTLDSFDAMFREANHNVSAPYGRNTL
HVFWELNFDFLPNYCYNGSTNRFVRTAIPFTQEPQRDKPANVQPYYLYGSKPLNIAYSHI
YSSYRNFVGPPHFKTICRLLGYQGIAVVMEELLKIVKSLLQGTILQYVKTLIEVMPKICR
LPRHEYGSPGILEFFHHQLKDIIEYAELKTDVFQSLREVGNAILFCLLIEQALSQEEVCD
LLHAAPFQNILPRVYIKEGERLEVRMKRLEAKYAPLHLVPLIERLGTAQQIAIAREGDLL
TKERLCCGLSMFEVILTRIRSYLQDAIWRGPPPTNGVMHVDECMEFHRLWSAMQFVYCIP
VGTNEFTAEQCFGDGLNWAGCAVIVLLGQQRRFDLFDFCYHLLKVQRQDGKDEIIKNVPL
KKMADRIRKYQILNNEIFAILNKYMKSVETDSSTVEHVRCFQPPIHQSLATTC
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
atgacgactcacgtgacgctcgaagatgccctgtccaatgtggatttgttggaggagctg
ccgctgcctgaccaacagccatgcatcgagcccccgccatcctccatcatgtaccaggct
aattttgacaccaactttgaagataggaatgcctttgtgacaggaattgccagatacata
gaacaggcaacagttcactccagcatgaatgaaatgttggaggaaggccatgagtatgca
gttatgctgtacacctggaggagctgttcccgagccattccacaggtgaaatgcaatgaa
caaccgaaccgtgttgagatctatgagaaaacggtggaggttttggagccagaggtcacc
aaactcatgaagtttatgtacttccagcgcaaggcgatcgaacgcttctgtaatgaggtg
aaacgtttatgccatgccgagcgcaggaaggatttcgtctccgaggcttacctcttgacc
ctggggaagtttatcaacatgtttgctgtcctggatgagttgaagaacatgaagtgcagt
gtgaaaaatgaccactctgcatacaaaagagctgctcaatttttaaggaaaatggcggat
cctcagtccattcaggagtctcagaacctgtccatgttcttggctaaccacaacaggatc
actcagtgtctacatcagcagttagaagttatccctggctatgaggagctcttggctgac
attgttaatatctgtgtggattactatgagaataagatgtaccttacccccagtgagaag
catatgttactaaaagtaatgggttttggtctctatttgatggatggaaacatcagtaac
atttacaagttggatgccaagaagagaatcaatctcagcaagatagacaaattctttaag
cagctgcaggtggtacccttattcggtgacatgcagatagaactggccagatacattaag
accagtgctcactatgaggagaacaagtccaagtggacctgtactcagagcagcatcagt
cctcaatacaatatctgtgagcagatggtccagatccgagacgaccatatacgtttcatc
tcagaactggcacgctatagcaacagcgaggtagtaacaggctcggggttggacagccag
aagtcagatgaagaatacaaggagctctttgacttggctttgcgtggacttcagctgctt
tccaagtggagtgcgcacgtcatggaggtgtactcctggaagctggtacaccccacggat
aagttctgtaacaaggactgccccggcacagctgaggagtacgagcgggcaacacgctac
aattacaccagtgaagaaaagtttgcctttgttgaggtaattgctatgattaaaggtctg
caggtcctcatgggcagaatggagagtgtttttaaccaggccatcaggaacaccatctat
gctgccttgcaagattttgcccaggtgaccctgcgagaacctctgagacaagccgttagg
aagaagaaaaatgttctgatcagtgtcctacaagcaatacggaaaacgatctgtgactgg
gatagtggacgggagcctcctaatgatccctgcctgaggggtgagaaagatcccaaagga
ggatttgatattaaagtcccacgacgagcagttggaccctcaagcacacagttgtatatg
gtaagaacaatgctggaatcgctcatcgcagacaaaagtggctcaaagaaaaccctgcgg
agcagcttggatgggccgatagttcttgccattgaggagtttcataaacagtcttttttc
ttcacacaccttctaaactgtagtgaagccctgcagcagtgctgtgacctgtcccagctc
tggttccgagaattctttctagaactgaccatgggccgacgtatccagttccctattgag
atgtccatgccctggattctaacggatcacattctggagacaaaggagccttccatgatg
gagtatgtgttgtatcccttggatctctacaacgacagtgcatattatgccttaaccaag
tttaaaaagcagtttctttatgatgaaattgaagcagaggtgaacctgtgtttcgatcag
tttgtgtacaagttggctgatcagatctttgcgtactacaaagctatggctggcagtgtc
ttgctggataaacgtttccgtgcagaatgtaagaactatggcgtgatcattccctatcca
ccttccaatcgctatgaaactttactgaagcaaagacatgtgcagttactaggcagatcc
attgacttgaacaggctcatcacccaacgtgtctctgctgcaatgtacaagtctctagac
caagccatcagccgctttgagagtgaagacctgacgtctattgtggaactggagtggttg
ctggagattaaccgtctgactcatcgattgctctgtaaacatttgactctggacagcttt
gatgcaatgttccgagaggctaatcataatgtctcggccccctacgggcgcaacaccctc
catgtcttttgggagctcaactttgactttctgcccaactactgctataatggctccacc
aacagatttgtccgcactgccattccgttcacgcaagagccacagcgggacaagcctgcc
aatgtgcagccttattacctctacgggtcaaagccactcaacattgcatacagtcacatc
tacagctcctaccgtaactttgtgggaccgcctcatttcaaaaccatttgccggctgctg
gggtaccaaggcattgctgtggtcatggaagaactgctgaaaatagtcaaaagcctgctg
caaggtactattctacagtatgtgaaaactctgattgaggtgatgcccaaaatatgccgc
ctgccaagacatgaatatgggtctccaggtattttggaattctttcatcaccagctcaaa
gatatcatcgagtatgcggagctgaagactgatgtattccagagtctgagggaagtggga
aacgctattctcttctgtctcctcatagagcaagccttgtcccaggaagaagtctgcgat
ttgctgcatgctgcacctttccagaacatcctacccagagtctacatcaaagaaggggaa
cgcctcgaagtccggatgaaacgactggaagccaaatacgcacctctccaccttgtaccc
ttaattgagagactgggaactgcacaacaaatagccattgctcgagagggtgacctgctg
accaaggagcggctctgctgcggcctgtccatgtttgaggtgatcctgacccggatacgg
agttatttgcaggatgccatctggcgaggccctcctccaacgaatggcgtcatgcatgtg
gacgagtgcatggagttccatcggttgtggagtgccatgcagtttgtctactgcattccc
gtggggacgaatgaattcactgcagagcagtgttttggagatggtctgaactgggccggc
tgtgcagttattgttctcctgggccagcagcgtcgctttgacctctttgatttctgctac
cacttgctgaaggtgcagaggcaggatgggaaggatgagatcataaagaacgtgcctctg
aagaaaatggccgaccgcatcaggaagtatcagatcttgaacaatgagatatttgccatt
ttgaacaaatacatgaaatcggtggaaaccgacagctccactgtggagcatgtgcgctgt
ttccaacctcccattcaccagtctttggctactacctgttaa
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