KEGG   Geotrypetes seraphini (Gaboon caecilian): 117351837
Entry
117351837         CDS       T09159                                 
Symbol
RBM22
Name
(RefSeq) pre-mRNA-splicing factor RBM22 isoform X1
  KO
K12872  pre-mRNA-splicing factor RBM22/SLT11
Organism
gsh  Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:gsh00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    117351837 (RBM22)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:gsh03041]
    117351837 (RBM22)
Spliceosome [BR:gsh03041]
 Complex B
  Other components
   Prp19-related factors
    117351837 (RBM22)
 Complex C
    117351837 (RBM22)
SSDB
Motif
Pfam: STL11_N zf-CCCH_RBM22 RRM_1 zf_CCCH_4 Torus RRM_occluded Nup35_RRM_2 zf-CCCH_2 zf-CCCH zf-CCCH_4 RRM_3 RRM_YTH1 zf-CCCH_3 zf-CCCH_10 zf-CCCH_12 RRM_PARP14_3 zf-CCCH_PARP12
Other DBs
NCBI-GeneID: 117351837
NCBI-ProteinID: XP_033783573
UniProt: A0A6P8Q8S8
LinkDB
Position
18:22373283..22391207
AA seq 421 aa
MATSLGSNTYNRQNWEDADFPILCQTCLGENPYIRMTKEKYGKECKICARPFTVFRWCPG
VRMRFKKTEVCQTCSKLKNVCQTCLLDLEYGLPIQVRDAGLSLKDDIPKSDVNKEYYTQN
MEREIQNSDGTRPVGTLGKATSSSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECP
YRHEKPTDPDDPLADQNIKDRYYGINDPVADKLLKRASTMPRLDPPDDKAITTLYVGGLG
DTISETELRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKSFNKLIVNGRRLNV
KWGRSQAARGKEKEREGIIDSGIKLEPVPGLPGALPPPPTTEEESSSNYFNLAPSGPSAI
VNIALPPPPGIVPPPPGFGPHLFHPMGSHPPPPFLRAPGPIHYPSQDPQRMGAHAGKHGS
A
NT seq 1266 nt   +upstreamnt  +downstreamnt
atggcgacgtctctgggctcgaacacatataacagacagaactgggaggatgcggacttt
cctattctgtgtcagacgtgtctcggagaaaatccgtacatcagaatgacaaaagagaaa
tatggaaaagaatgcaagatctgcgctcgaccttttactgtgtttcgttggtgtcctggt
gttcgtatgcgctttaagaagactgaagtatgtcagacatgtagtaagctgaagaatgtg
tgccagacctgcttactagatctagaatatggtttacctattcaagtcagggacgctggt
ctctccttgaaagatgacataccaaaatcagatgtcaacaaagaatattacacccagaat
atggagcgagagattcagaactcggatgggacaagaccagtggggactcttggaaaagcc
acctctagtagtgatatgcttcttaaactggctcggaccactccatattacaaacgcaac
cgacctcacatctgctctttctgggtgaaaggggagtgtaagagaggagaggaatgtccc
tatagacatgagaagccaacagatcccgatgaccccttggcagatcagaacattaaggat
cgctactacggtatcaatgatcctgtggcagataagcttttgaagcgggcatctaccatg
cctcgccttgaccctcctgatgataaggctataactacgttatatgttggtggactagga
gataccatcagtgagacagagcttaggaaccatttttaccagtttggcgagatccggact
ataaccgttgtgcaaaggcagcagtgtgcattcattcagtttgcaacaaggcaggcagca
gaagttgcggcagagaaatcctttaacaagctgattgttaatgggcgaaggctcaacgtt
aagtggggaaggtctcaggcagctagaggaaaagagaaagaaagagaaggcataattgat
tctggtataaaactagaacctgtccctggtctaccaggagctttgcccccacctccaaca
acagaagaggaatcgtcttccaactactttaacctggcaccgagtggcccttcagctata
gttaatattgcattaccaccaccacctgggattgttcctccccctccaggttttggacca
cacttattccatccgatgggctctcatccaccccctccctttttaagagctccaggccct
attcactatccctctcaagatccacaaaggatgggtgctcatgctggcaaacatggaagt
gcctaa

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