Geotrypetes seraphini (Gaboon caecilian): 117351950
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Entry
117351950 CDS
T09159
Symbol
CSTF3
Name
(RefSeq) cleavage stimulation factor subunit 3 isoform X1
KO
K14408
cleavage stimulation factor subunit 3
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117351950 (CSTF3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsh03019
]
117351950 (CSTF3)
Messenger RNA biogenesis [BR:
gsh03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
117351950 (CSTF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
TPR_6
TPR_19
Motif
Other DBs
NCBI-GeneID:
117351950
NCBI-ProteinID:
XP_033783733
UniProt:
A0A6P8Q981
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Position
19:complement(464744..615504)
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AA seq
716 aa
AA seq
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MSGEGAVDQAAEYVPEKVKKAEKKLEDNPYDLDAWSILIREAQNQPIDKARKTYDRLVSQ
FPSSGRFWKLFIEAEIKAKNYDKVEKLFQKCLMKVLHIDLWKCYLAYVRETKGKLPSYKE
KMAQAYDFALDKIGMEIMSYQIWVDYINFLKGVEAVGSYAENQRITAVRRVYQRGCVNPM
INIEQLWRDYNKYEEGINVHLAKKMIEDRSRDYMNARRVAKEYETVMKGLDRNAPSVPPQ
NTPQEALQVEMWKKYIQWEKSNPLRTEDQTLITKRVMFAYEQCLLVLGHHPDIWYEAAQY
LEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEESRMKHEKVH
SIYNRLLTIDDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDIRTRHHVYVSAALMEY
YCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLAPEK
SGEIWARFLAFESNIGDLASILKVEKRRFTAFKEEYDGKETALLVDRYKFMDLYPCSASE
LKALGYKDVSRAKLASIIPDPVVAPSIVPAMKDELDRKPEYPKPDTNQMIPYQPRHLAPP
GMHPVPGGVFPVPPAAVVLMKLLPPPICYQGPFVQVDELMGIFRRCRMPELDEAVRLITG
GQPELTVEGNGPLENNAMLNKAIKRPNEDSDEDEEKGSVLPPIHDIYRARQQKRIR
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgtctggggaaggagccgttgaccaggctgcagagtatgttccagaaaaagtgaagaaa
gctgaaaagaaattagaagataatccatacgatcttgacgcgtggagcattctcattcga
gaggcacagaatcaacctatagacaaagcacggaagacctatgatcgtcttgtttcccag
ttccccagttctggcagattctggaaactattcattgaagcagagataaaagctaaaaat
tatgataaagtagagaagttgtttcagaaatgtcttatgaaggttttacacatagactta
tggaaatgttacctcgcctatgtacgagaaaccaaaggaaaactaccaagttacaaagaa
aaaatggctcaagcatatgactttgctttagataaaatcggcatggaaattatgtcctac
cagatttgggtggattacatcaattttctgaaaggagtagaagctgtgggatcttatgca
gagaaccagcgaataacagcagttcgaagggtgtatcagcgaggatgtgtaaacccaatg
atcaatattgaacaattatggagagactataataaatatgaagagggtatcaatgttcat
cttgctaagaaaatgattgaagatcgtagtagagactatatgaatgctagacgagtagcc
aaggaatatgaaactgtgatgaaaggtcttgatcgtaatgcaccctctgtacctccccaa
aataccccccaagaagcactacaggtagagatgtggaagaaatatatacagtgggaaaag
agtaatccactccgtacagaagaccaaactcttataacaaaaagagttatgtttgcttac
gagcagtgtctgttggttcttggccaccatccggacatctggtatgaggctgcacagtat
cttgagcaatctagtaagctcttggctgaaaaaggggatatgaacaatgctaaactattc
agtgacgaagctgctaacatttatgaaagagccatcagcactttattgaagaagaacatg
ctgctttactttgcgtatgccgattatgaggagagtcgaatgaaacatgaaaaagtgcac
agcatctacaatagattgttaaccatagatgacattgatcctacactggtgtacatccag
tatatgaaatttgcaagacgcgcagaaggtatcaaatctggcagaatgatattcaaaaaa
gcaagggaggatatccgaacccgccatcatgtttatgtgtctgctgcattaatggaatac
tattgtagcaaggacaaatctgtggcctttaagatttttgagctgggattgaagaaatat
ggagatattcctgaatatgtactggcatacattgactatctgtctcaccttaatgaggac
aataatacacgagttttgtttgaacgagttctaacatcaggaagtctggctcctgagaaa
tctggtgaaatctgggctagattcttggctttcgaaagtaatattggtgatttggctagt
atactaaaagtggaaaagcgaaggttcactgccttcaaagaggagtatgatggaaaggaa
acagctctgttggtagataggtacaaatttatggatttgtatccctgttctgcaagtgaa
cttaaagctcttggttataaggatgtttcacgtgccaaactagcatctataattccagac
cctgtagtagccccttctattgtacctgcaatgaaggatgaattagatagaaaaccagag
tatccaaagccagacacaaaccagatgatcccttatcagccaagacatctagctcctcca
ggaatgcatcctgtgcccggtggtgttttcccagttcctcctgctgctgtagttttaatg
aagcttcttcctcctcccatatgttaccagggtccttttgtgcaagtagatgaacttatg
gggattttccgaagatgcaggatgccagagttggatgaagctgtaagactgattactgga
ggccagcctgaattaacagtggaaggcaatgggcctttggaaaataatgctatgctcaat
aaagctatcaaaaggccaaatgaagattcagatgaggatgaagaaaagggatccgtgctt
cctcctattcatgacatctacagagcacgacagcaaaagaggattcgatga
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