Geotrypetes seraphini (Gaboon caecilian): 117351993
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Entry
117351993 CDS
T09159
Symbol
RAG1
Name
(RefSeq) V(D)J recombination-activating protein 1 isoform X1
KO
K10628
V(D)J recombination-activating protein 1 [EC:
2.3.2.27
]
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04068
FoxO signaling pathway
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
117351993 (RAG1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gsh04121
]
117351993 (RAG1)
Enzymes [BR:
gsh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117351993 (RAG1)
Ubiquitin system [BR:
gsh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117351993 (RAG1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAG1
RAG1_imp_bd
zf-RAG1
zf-C3HC4
zf-C3HC4_2
zf-RING_6
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
117351993
NCBI-ProteinID:
XP_033783814
UniProt:
A0A6P8PIW8
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All DBs
Position
19:7909205..7918832
Genome browser
AA seq
1083 aa
AA seq
DB search
MRTGYLLAHLQMFPIMGFSPFYKVLWCIWIIVPARMETTLSSIPWRSMPAEIQHPYTKFS
EWKFKLFRVRSFEKTSSNDLQEENKVQVEESLEKVSEVKLSAEIQSLEHTEPSFAALRCQ
PQAHEKTDNNPVDLKTTENEQSHVVNLQQLCRICGISFKSDPHNRSYPVHGPVDEETQGI
LRKKEKRATSWPDLISKVFKIDVRGDMDTIHPTRFCHNCWSIINQKFNNAPCEVYFPRND
AVDWQPHSGTCSVCTSVQRGIKRKSQLQGNSQLSKKLKRGTEHIKKRKAVKKNSQLKTNK
TLIPKLTNCQKIHLSTKLLVVDYPADFMKSIACHICEHILADPVQTTCKHLFCKTCILKC
LNVMGSYCPSCRYPCFPTDLVSPVKSFLNILNSLVLRCTVKECGEEVSLGKYANHLSAHT
ETKGKKAYAHINKGGRPRQHLLSLTRRAQKHRLRELKHQVKAFAEKEEEGDVKSVCLTLF
LLALRAHNEHRQADELEAIMQGRGAGLHPAVCLAIRVNTFLSCSQYHKMYRTVKATTGRQ
IFQPLHALRNAEKALLPGYHPFEWIPPLKNVSANTEVGIIDGLSGLALSIDDYPVDTISK
RFRYDAALVSALKDLEEFLLEGLKTKDLDDYLSGPFTVVVKESCDGMGDVSEKHGCGPAV
PEKAIRFSFTIMNICISHNNKNVRIFEEAKPNSELCCKPLCLMLADESDHETLTAILSPV
IAEREAMKHSKLMLEIGGILRSFRFIFRGTGYDEKLVREVEGLEASGSVYICTLCDATRL
EASQNLVLHSITRSHAENLERYETWRSNPHHESVDELRDRVKGVSAKPFIETLPSIDALH
CDIGNATEFYKIFQLEIGEVFKNPNITKEERQRWQTTLDKHLRKKMNLRPVMRMNGNFAR
KLMSKEMVEAICELVPTEERQNALRELMNLYLKMKPVWRSTCPLKECPELLCQYTFNSHR
FAELLSTKFKYRYGGKITNYFHKTLAHVPEIIERDGSIGAWASEGNESGNKLFRRFRKMN
ARQSKCYEMEDVLKHHWLYTSKYLQKFMNAHNALKNQGFTLATETNLDDSPDLEYSLESL
GSV
NT seq
3252 nt
NT seq
+upstream
nt +downstream
nt
atgagaacagggtatttacttgcacatctgcaaatgtttcctatcatggggttttcgcct
ttctacaaagttctctggtgcatttggattatagtacctgcaagaatggaaactactcta
tcaagcattccatggcgttccatgcctgcagaaatccagcacccatatacaaaattttca
gaatggaagttcaagttattcagagtaaggtcttttgaaaagacatcttcaaacgacctt
caagaagagaacaaagttcaagtggaagaatctttggagaaagtatctgaggttaagctg
tcggcagaaattcaaagtcttgagcacactgagccttcatttgcagctttgagatgtcaa
ccacaggcacatgaaaaaactgacaacaatcctgtagacttgaaaacgacagagaatgaa
cagtctcacgtagtaaacttgcaacaactttgtcgtatatgtggaatttcctttaaaagc
gatccacataacagaagctaccctgtacatggaccagtagatgaagagacacaagggatt
cttagaaagaaggaaaagagagcaacgtcttggccagatcttatctcaaaggttttcaag
attgatgttagaggcgatatggatactatccatccaacacgcttttgccacaactgctgg
agcatcatcaaccagaagtttaataatgccccttgtgaggtgtattttccaaggaatgac
gccgtagattggcagccacattcagggacctgcagcgtttgtacttcagtccaacgcggc
atcaaaagaaaaagtcaacttcaaggaaattcacagttgagcaaaaagcttaagcgaggc
actgagcacattaagaagaggaaagccgtaaagaaaaattcccagctgaaaaccaataag
accctcattccaaagctgactaactgccagaagatacacctcagcacaaagttgctagtg
gtagattaccctgcagatttcatgaagtcaatagcttgccatatttgtgaacatatcctg
gccgatccagtgcagactacatgcaagcatctattctgcaaaacttgcattctcaaatgc
ctaaacgttatgggtagttattgtccctcgtgcagatatccttgctttccaactgatctg
gtaagcccagtgaaatccttcttgaatatcctcaactcactggtgctgagatgcactgtg
aaagagtgtggtgaagaagtctctttaggaaaatatgctaaccatctctctgcccacaca
gaaacaaaaggcaaaaaagcttatgcccacattaataaaggtggacggccaaggcaacac
ttgctgtcattgactagaagagcacagaagcatcgcctcagagagctcaagcatcaagtg
aaagcttttgcagagaaagaagaagaaggtgatgtcaagtcagtgtgcttgacgttgttt
cttcttgccttgagagctcacaatgaacacaggcaagctgatgaactcgaagccatcatg
caaggcagaggagcagggcttcacccagctgtatgccttgccatacgtgtcaatactttc
ctcagctgtagccagtatcacaaaatgtacagaactgtaaaagctacaactgggagacag
atctttcaacccctgcatgcccttcgaaacgctgaaaaggctctcttgcctggttatcac
ccatttgagtggataccgcctctaaaaaatgtttccgctaacacagaagttggaatcata
gatgggctatctggactggcattgtccatcgatgattacccagtggacacaatttcaaaa
agatttaggtatgacgctgccttggtttctgccttaaaggacttagaagagtttctacta
gaaggcttgaaaaccaaagacttggatgactacctaagtggcccgtttaccgtagtggtg
aaagaatcttgtgatgggatgggagatgttagtgagaagcatggatgtgggccagctgtc
cctgaaaaagcgattcgattttcttttactatcatgaacatctgtatcagtcataacaat
aaaaatgtgagaattttcgaagaagctaagcctaattcagagctatgctgcaagccgctg
tgccttatgcttgctgatgaatccgaccacgaaacactgacagccatcttgagtcctgtc
attgcagaaagagaggcaatgaagcatagcaaactgatgcttgaaatcggaggcatactc
agatcattcagattcatatttagaggcacaggatatgatgaaaagcttgttcgtgaagta
gaaggcctggaagcttctggatctgtttatatttgcaccctttgcgatgccacacgcctt
gaagcttcccagaacttagttcttcactccataacaaggagccatgccgaaaacttagag
cgttacgaaacatggaggtcaaacccacaccacgagtctgtggatgaactacgtgacaga
gtgaagggtgtttctgccaagccattcattgaaactctgccttccatcgatgctttgcat
tgcgatattggcaacgcaactgagttctacaagatattccagcttgagataggtgaagtt
ttcaagaatcccaacataactaaagaagaaagacaacggtggcagacgacccttgacaag
cacctcaggaagaaaatgaacctgaggccagtaatgaggatgaacggtaattttgccaga
aaactaatgtccaaagaaatggtggaagctatttgtgagttggtacctactgaggaacga
caaaatgcactcagagaactcatgaacctttatcttaaaatgaaaccagtatggcgatca
acttgccctttgaaggaatgcccagaattgctctgccagtataccttcaattcccaccga
ttcgctgaactgttatctactaaatttaagtaccgatatgggggcaaaatcacaaattac
tttcacaaaactctagctcatgtccctgagatcattgaaagagatggctcgatcggtgct
tgggcaagtgaaggaaacgagtctggaaacaaactgtttaggcgtttccgaaaaatgaac
gccagacagtcaaaatgctatgaaatggaagatgtattaaagcatcattggttgtacact
tctaaatatcttcaaaagtttatgaatgcacataatgcgctgaaaaaccaggggttcacg
ttagccacagaaactaatctagatgactctccagatctggaatattctttagaatcttta
ggttccgtgtaa
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