Geotrypetes seraphini (Gaboon caecilian): 117352066
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Entry
117352066 CDS
T09159
Symbol
IRF7
Name
(RefSeq) interferon regulatory factor 7 isoform X1
KO
K09447
interferon regulatory factor 7
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04620
Toll-like receptor signaling pathway
gsh04621
NOD-like receptor signaling pathway
gsh04622
RIG-I-like receptor signaling pathway
gsh04623
Cytosolic DNA-sensing pathway
gsh05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
117352066 (IRF7)
04621 NOD-like receptor signaling pathway
117352066 (IRF7)
04622 RIG-I-like receptor signaling pathway
117352066 (IRF7)
04623 Cytosolic DNA-sensing pathway
117352066 (IRF7)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117352066 (IRF7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gsh03000
]
117352066 (IRF7)
Transcription factors [BR:
gsh03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
117352066 (IRF7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
117352066
NCBI-ProteinID:
XP_033783998
UniProt:
A0A6P8Q9Y6
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All DBs
Position
19:30695657..30751610
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AA seq
503 aa
AA seq
DB search
MAGNNRRYPRPLFLPWLIEQIDSNNYEGLYWVDEKHTKFHIKWKHKSRNDYNPKDSELFK
AWAIEGGKYSEQCEDPTLWKTNFRCALNSITVNKKKVITIVVDKSLDLHDPHKVFQINCP
QDSAVAASSYFLENHNGLNSEEHNDDENLRISPDHIQTVFKSAMPQPVCLMDQRPIEEKM
QGMSLRNHLPAETQLPEMLLSSNHQNGHNVCPFQRSGMSGPGNVSKENKYHPMETQRPLT
EYGTLQNGISMPDAFYPQAPSPQFPGQTHCPVNTFLLTLEVTVLYRGKTMMQQQVNSPCL
LSYNAESDLSFNYNSAVSFPSPESLPDQKQVQYTTKLLQNVEPGLLLEVDQETHKIYATR
MGKCKVFWAFSKQLENPAQDPESNMLQREERTQIFSFNQFLMELRDYKAGRQKSPDYTLY
LCFGQSFSEQRARIERKLILVKIVPQFCAQVHDLIQREGASSLNSESLSLQISNSSNNSL
YELIDSCDLMDIDFSQFVGLLSR
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atggcaggaaacaacagaagatacccacggccactcttcttgccatggttgattgaacag
attgacagcaacaattatgaagggttatattgggtagatgaaaaacacaccaagtttcat
attaaatggaaacacaagtcccggaatgactacaaccctaaggactctgaactcttcaag
gcttgggccattgagggaggcaagtacagtgaacagtgtgaggatcctaccctgtggaag
accaacttccggtgtgccttgaatagcatcaccgtgaataagaaaaaagtgattacaata
gtggtggataaatcattggacctgcacgatccccataaggtgtttcagatcaactgtccg
caggattctgctgttgccgcctcttcttatttccttgaaaatcacaatggcctaaacagt
gaggaacataatgatgatgaaaatctccgtattagtccagaccatatacagactgttttc
aaaagtgccatgcctcagcctgtctgtctaatggaccagagacccatagaagagaaaatg
cagggcatgagcctgagaaatcacttgccagcagaaactcaattgccagaaatgcttctg
tccagtaatcatcagaatggccacaatgtgtgtccctttcagaggtcaggaatgtctggc
ccagggaatgtctccaaagagaacaagtatcaccccatggagacacagagaccattgaca
gaatacggcacactccagaatggcatttctatgccagacgcattttatcctcaggcacct
tctccacagttcccaggccaaacccattgtccagtaaacaccttccttttaactcttgaa
gtcactgtgctctacagagggaaaacaatgatgcagcaacaggtaaacagcccctgtctg
ctgagttacaatgcagagtctgacctgagcttcaactacaattcagcagtaagcttcccg
agccctgaaagcttgccagatcagaagcaagtgcagtataccacaaaactgctacagaat
gtggagccaggactgcttctagaagtggatcaggaaacacacaagatctatgcaacgcgc
atgggcaagtgcaaggtgttctgggcattttccaagcagttggagaacccagcacaggat
ccagaatctaacatgttgcagagggaagagagaacccaaattttcagcttcaatcagttc
ttgatggaattaagggattataaagctggccgtcaaaagtctcccgattacaccctctac
ttgtgctttggacagtccttctctgagcagagagcgagaatagagaggaagctcatcctg
gtgaagattgtaccacaattctgtgctcaggtgcatgatctgatccagagagaaggtgct
tcgtctctgaacagcgagagcctcagtctgcagatctctaacagcagcaacaacagccta
tatgaactcattgactcctgcgacttaatggacatagacttttcccagtttgtcggcctt
ctctctcgctag
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