Geotrypetes seraphini (Gaboon caecilian): 117352093
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Entry
117352093 CDS
T09159
Symbol
PPFIA1
Name
(RefSeq) liprin-alpha-1 isoform X1
KO
K26226
liprin-alpha
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gsh04131
]
117352093 (PPFIA1)
Membrane trafficking [BR:
gsh04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
117352093 (PPFIA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
HWE_HK
Motif
Other DBs
NCBI-GeneID:
117352093
NCBI-ProteinID:
XP_033784086
UniProt:
A0A6P8QB60
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All DBs
Position
19:5840468..5938366
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AA seq
1265 aa
AA seq
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MMCEVMPTISEAEIPSGGGEGHAPGSLLHSDSDSHFEQLMVSMLEERDRLLDTLRETQET
LALSQGKLQEVSHERDSLQRQLNTALPQEFAALTKELNVCREQLLEREEEIAELKAERNN
TRLLLEHLECLVSRHERSLRMTVVKRQAQSPAGVSSEVEVLKALKSLFEHHKALDEKVRE
RLRVALERCSLLEEELGATHKELMIMREQNNQKKVFIDGMPVVNHEKENTPNTNGNRSSD
GSLSHEDIGKMMELQEIIEKQTKEQSQMKDRLAALSNRVTELEEDLDTARKDLIKSEELN
TKLQRDVREAMAQKEDMEERITTLEKRYLAAQREATSVHDLNDKLENEIANKESMFRQSE
EKNRQLQERLELAEQKLQQTLRKAETLPEVEAELAQRVVALSKAEERHGNIEERLRQMEA
QLEEKNEELQRARQREKMNEEHNKRLSETVDKLLSESNERLQLHLKEKMASLEDKNTLIL
EVENAKKLIEETQHEKDQLLLDIEAMRSENEQMRIRAATLHHSRPHLGSVPDFRYALAPS
SIPDSHVDSYSTSSVLRRPQKGRLAALRDEPSKVQTLNEQDWERAQQASVLANVAQAFES
DADVSDVEDDRDTIFNSVDLLSPSGQADAQTLAMMLQEQLDAINKEIRLIQEEKESTEQR
AEEIENRVGSGSFDNLGRFRSLSSIPPYYSGSSPPGSGHSTPRRIPHSPAREVDRLGVMT
LPSSQESFLIQTSVTHQSVVYSSSSPPSSTPSYNESSQQSPGSRDDVRDDKATIKCETSP
PSSPRSLRLDRFHKGALHTVSHEDIRDIRNSTGSQDGQGSNPSSSNSSQDSLNKAPRKKG
IKSSIGRLFGKKEKGRPGPAGKDSPGQAGTPEIENSSPDALVLSKLGGQAEKNRKLQKNP
KLGHELLEEARRQGLPFAHWDGPTVVVWLELWVGMPAWYVAACRANVKSGAIMSALSDTE
IQREIGISNPLHRLKLRLAIQEIMSLTSPSAPPTSRTSTGNVWVTHEEMETLTSSPQTTL
AYGDMNHEWIGNEWLPSLGLPQYRSYFMECLVDARMLDHLTKKDLRGQLKMVDSFHRNSF
QCGIMCLRRLNYDRKELERRREESQNETKDVLVWSNDRVIQWILSIGLKEYADNLVESGV
HGALIALDESFDHTALALLLQIPTQNTQARSVLEREFNNILAMGTGRRFDEDDDKGFRRA
PSWRKKFRPKDVRGLAAGSAETLPANFRVTSSMSSPSMQPKKMQMDGSMTGAPRLDSATV
RTYSC
NT seq
3798 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgtgaagtgatgccaaccatcagcgaggcggaaatcccttctgggggaggtgag
ggccatgctccaggctccctattacactcggactcagattcccattttgagcagttaatg
gtgtcgatgctagaagaaagagatcgtcttctggatactctaagagaaactcaagaaaca
cttgcattgagtcagggcaagctacaggaggttagccatgaaagagattctctgcaaagg
cagctcaatactgctcttccacaggagtttgcagcactcactaaagaactgaacgtttgc
cgggagcagctccttgaaagggaggaagagattgctgagctgaaggcagaaagaaataac
acaaggctcttattggaacatctggagtgtctcgtttctaggcatgagaggtctctcaga
atgacggtggtaaaaagacaagcacagtctccagcaggagtatctagtgaagtggaagtc
ctcaaagcactgaaatcactatttgaacaccataaagcccttgatgaaaaggtgagagag
agactgagagtggcactagaaagatgtagtttactggaagaggaactcggtgcaacgcat
aaagagttgatgattatgagagaacagaataatcaaaagaaagtatttatcgatgggatg
ccagtcgtaaatcacgagaaggaaaatacgccaaacactaatggaaataggtcgtcagat
ggctctttaagtcatgaagacatcggtaaaatgatggagcttcaagagatcattgagaaa
caaacaaaggagcaaagtcaaatgaaggaccggcttgctgctctttctaacagagtaacg
gagctggaagaggatctcgacacagctagaaaagacttaatcaaatctgaagaattaaac
accaagttacaaagagatgtacgagaggctatggctcaaaaagaagatatggaagagaga
ataacaacccttgaaaaacgctacctcgccgcacagcgtgaagccacttctgtgcatgac
ctcaatgataaacttgaaaatgaaattgccaacaaggaatccatgtttagacagagtgaa
gaaaagaaccgacagctacaagagcgcctggagctggctgaacagaagctgcagcagacg
ctgaggaaagcggagactctgccggaggtggaagccgagctcgcccagagggtggtggct
ttgtcgaaggctgaggaaaggcatgggaacatcgaagagcgacttcgccaaatggaagca
cagctggaagagaagaatgaggagctgcagcgggcacgtcaaagagaaaaaatgaatgaa
gaacataacaaacgcttatcagaaacagtagacaaacttctttctgaatccaatgaaaga
ttacagcttcatcttaaagagaagatggcatctctggaagacaagaacaccctcattctt
gaggtagaaaatgcaaagaaacttatagaagaaactcagcatgagaaggatcagctgtta
ttagacattgaagccatgagatcagaaaacgagcaaatgaggataagggctgcaactctt
caccacagtaggcctcatttaggcagtgtgccagatttcagatacgctttggcaccttca
tccattccagacagccatgtggactcctacagcacctcctctgtgttacgccgacctcag
aaaggacgtttggcagctctccgggatgaaccctcaaaggtgcagactcttaatgagcag
gattgggagcgggcgcagcaagcgagcgtcttagccaacgtagcccaagcttttgagagc
gacgccgatgtctctgatgtggaagatgaccgggacactatattcaactcggttgacctg
ttgtcaccaagcggacaggccgatgcgcagactctagccatgatgctccaagagcagctg
gatgcaatcaacaaagaaatcagactgatacaagaagaaaaagagagtacggagcagcgg
gcagaggaaattgaaaatcgggtagggagtggaagctttgacaatcttggccggttcagg
tcattgagttcaatcccaccgtattactcaggttcctctcctcctggcagcggccactcc
acaccgaggagaatcccgcacagtcctgcccgggaagtggatagactaggagtcatgact
ctgccttcatctcaagagtcctttttaatccagacctcagttacccatcagtctgtagtt
tattcatccagctcccctcccagttccaccccatcatataatgagtcgtcacaacagtct
ccaggttccagagatgatgtacgagatgacaaagccacaataaaatgtgagacatcccca
ccatcctctcctaggtccctccgactagacaggttccacaaaggagcactgcataccgtc
agccatgaggatatccgggatattaggaactctacaggttcacaggatggacagggaagc
aatcccagcagtagcaatagcagccaagactcccttaataaagcccctagaaagaagggc
atcaaatcttccatcggtcgtctttttggcaagaaagaaaaaggtcgccctggtccagct
ggaaaagattcgccaggacaagcaggtacaccagaaatagaaaattcatctccggacgcc
ttggtacttagtaagttgggaggacaggcagaaaagaacagaaaactgcagaagaatcca
aagttagggcatgaactactggaggaagccagaaggcaagggctaccgtttgctcactgg
gatggtcctacagtagtggtatggttagagttgtgggtcgggatgcctgcctggtatgtg
gcagcgtgtcgagcaaacgtgaaaagtggtgctattatgtcagccttgtcagatactgaa
atacagcgtgaaataggaatcagcaatccactgcacagactgaagctcaggcttgctatt
caagagatcatgtccttaaccagcccatccgctcctcctacgtcaagaacgtctacggga
aatgtctgggtaacgcatgaagaaatggaaacgcttacatcctcaccacaaacgactcta
gcctatggtgatatgaaccacgagtggatcggcaatgagtggctacccagtctggggctg
ccccagtaccggagttacttcatggagtgtcttgttgacgccagaatgttggatcacttg
acaaaaaaagatcttcgtgggcagcttaaaatggttgacagttttcacaggaacagtttc
cagtgtggcattatgtgtctgcgaaggttaaattatgaccggaaggaacttgaaagaaga
agagaagaaagccagaatgaaacaaaagatgtccttgtgtggagcaatgaccgagtgatt
cagtggatactgtcaattgggctgaaagaatatgccgataaccttgttgaaagtggcgtt
cacggagcacttattgccttagatgaatcttttgaccacaccgcactggctctcttgcta
caaatacctacgcagaacacacaggcccgatctgtattagagagagaatttaacaacatt
cttgccatgggaacagggagacgatttgatgaggatgatgataaaggcttcaggcgagca
ccatcgtggaggaagaagtttcgaccaaaggacgttagaggtttagctgctggatccgca
gaaacacttcctgcaaatttcagggtgacctcatcaatgtcttcaccttctatgcagcca
aagaagatgcaaatggatggcagtatgacaggagcaccaagactggactccgctacagta
aggacttactcctgttaa
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