Geotrypetes seraphini (Gaboon caecilian): 117352102
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Entry
117352102 CDS
T09159
Symbol
LRP4
Name
(RefSeq) low-density lipoprotein receptor-related protein 4 isoform X1
KO
K20051
low-density lipoprotein receptor-related protein 4
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gsh04131
]
117352102 (LRP4)
Membrane trafficking [BR:
gsh04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
117352102 (LRP4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
Ldl_recept_a
FXa_inhibition
Vgb_lyase
SGL
cEGF
EGF_LRP2
Motif
Other DBs
NCBI-GeneID:
117352102
NCBI-ProteinID:
XP_033784112
UniProt:
A0A6P8P4N7
LinkDB
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Position
19:complement(13235197..13398334)
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AA seq
1898 aa
AA seq
DB search
MWLPGRGALAAAVLVSLLGAGGAVSSTACACGRNHFTCAVSTFGECTCIPTQWQCDGDND
CGDHSDEDGCMLPTCAPLDFHCDNGKCIRRSWICDGDNDCEDDSDEQDCPPRECEEDEFP
CQNGYCIRSLWHCDGENDCGDNSDEQCDMKKCSEKEFRCSDGSCIAEHWFCDGDTDCKDG
SDEEGCPSNVPTVTCNLEEFQCAYGRCILDIYHCDGDDDCGDWSDESDCSSHQPCRSGEF
MCNSGLCINAGWRCDGDLDCDDQSDEKNCTASVCTADQFRCASGRCIRLSWRCDGEDDCT
DNSDEEGCEKTGTPQCASDQFLCGSGRCIGQRKVCNGVNDCEDGSDERPHQNCRPRTGDE
NCNVNNGGCAQKCHMTRGVAQCSCHTGYRLMEDGRSCQDVNECAEDGYCSQGCTNIEGGF
QCWCVQGYELRPDKRSCKALGPEPVLLFANRIDIRQVLPHRSEYTLLLNNLENAIALDFH
HNKELVFWSDVTLDRIMRANLNGSNVEEVVSTGLESPGGLAVDWIHDKLFWTDSGTSRIE
VANVDGTHRKVLLWQNLEKPRAIALHPMEGTIYWTDWGNQPRIEYASMDGSSRCIIADTH
LFWPNGLTIDYAGHRMYWVDAKHHVIERADLDGKNRRAVISQGLPHPFAITVFEDSLYWT
DWHTKSINSANKFTGKNQEIIRNKLHFPMDIHTLHPQRQPAAGRNRCGRDNGGCSHLCLP
SAKNYTCACPTGFRNISSYMCAESLDKFLLFARRTDIRRISFDTEDLSDKVIPVSNVRSA
VALDWNAKDDFVYWTDVSTNSINRAKWDGSGQEVVVDTSLESPAGLAIDWVTNKLYWTDA
GTDRIEVSHSDGTMRTVLIWENLDRPRDIVVDSIGGFMYWTDWGERPKIERAGMDASGRI
VLISSNLTWPNGLAIDYESEQLYWADAGMKTIEFANLDGTDRKVLIGSHLPHPFGLTLYG
ERLYWTDWQSKSIESADKKTGLDRKTLRENLENLMDIHVFHRHRSPVRTSCRENNGGCSH
LCLLAPLPTGHSCACPTGINLLADGKTCSSGMTSFLIFARRTDIRILSLDIPYFADVVVP
INVTMKNTIAIDVDPQEGKVYWADSTVRKVSRANLDGSEHEDIITTGLMTMDGIAVDAIG
RKLYWTDTGTNRIEVGNLDGSMRKVLVWQNLDSPRAIALHHEMGFMYWSDWGDNAKLERS
NMDGTDRLVLISKNLGWPNGLAVDKAGSQLLWADAHTERIEVADLHGGLRRTLVSPVQHP
YGLTLLDSHIYWTDWQTRSIHRADKNTGSNVIVVRSNLPGLMDIQAVDRASSLGSNKCAM
KNGGCTHLCLPRPSGSSCACPTGILLKEDGRSCDPSPESYLLFSNRASIRRISLDTDDFT
DVYIPVPKLNNVISLDYDSVDGKIYYTDVFLDVIRRSNLNGSSMETVIGQGLKTTDGLAV
DWVARNLYWTDTGRNTIEVARLDGSCRKVLINSSLYEPRAIAVFPRKGYLFWTDWGHIAK
IERAYLDGSDRKVLINTDLGWPNGLTLDYDIRRIFWVDAHLDRIESADLNGKLRQVLISQ
VSHPFALTQHDRWIYWTDWQTKSIQRVDKYSGRNKETVLANAEDLMDIIVVSPQRQTGSN
ACGVNNGGCSHLCLARISDFVCACPDDMEGQHCSITPGFVPVLESTTSSSKNRTAQTADH
LTPLEATVRSCLEKDVSQGLCTQQNGAVPATTGEGLHISYIIGGFLSTLALLLLIAVLII
YRHKKSKFPDPVIGNLTYSNPSYRTSTQEVKLEVTPSPTVYNQLLYKEEASDSSFTKEKI
KIVEGIYLLSRDGNEWDDLKQMKPSRGSILRDHVCIKTDTVSLQASTGSLDDTETEQLLQ
EEQSESSSVNLTTTPEHHASLPDTGWKCVHKPATESQI
NT seq
5697 nt
NT seq
+upstream
nt +downstream
nt
atgtggctgcccggccggggagccctggcggcggctgtcctggtctcgctgctcggcgcc
ggaggtgcagtgagcagcacggcgtgtgcatgtggccgcaatcactttacctgtgcagtg
agcaccttcggagagtgcacctgcatccccactcagtggcagtgtgacggcgacaatgac
tgtggtgaccacagcgacgaagatggctgcatgctacccacctgtgctcctcttgacttc
cactgtgataacgggaagtgcattcgtcgctcctggatctgtgatggcgacaacgactgc
gaggacgattcagatgaacaagattgccccccccgggaatgcgaggaagacgagttcccc
tgtcagaatggatactgtatccgcagcttgtggcactgtgatggtgaaaacgactgtggc
gataacagcgacgagcaatgtgacatgaagaagtgctcagagaaggagtttcgttgcagt
gacggcagctgtatagctgagcactggttctgtgatggggacacggactgcaaggacgga
tcggatgaagagggctgcccatccaatgtgccaacagtgacctgcaacttggaagagttt
cagtgtgcatatggacgctgtatactggacatctatcactgtgacggagatgatgactgt
ggagactggtccgatgagtctgactgctcctcgcaccagccctgtcgctctggcgaattt
atgtgtaacagcggtctgtgtattaatgccggctggcgctgtgatggcgacttggattgc
gatgatcaatcggatgagaagaactgcactgcctctgtttgcacagctgatcagttccgc
tgtgcctcaggccgctgcatccgtctctcctggcgctgtgatggagaggatgactgtacc
gataacagcgatgaggaaggctgtgagaagactgggactccccagtgtgcctctgaccag
ttcctttgtggcagtggtcgctgcatagggcagaggaaagtgtgcaatggtgtgaacgac
tgtgaggatggcagtgatgagcgcccccaccagaactgtcgtccccggacaggtgatgag
aactgcaacgttaacaatggcggctgtgctcagaagtgtcacatgacacggggggttgca
cagtgcagctgccacactggataccgactgatggaggatggcagatcctgccaagatgtt
aatgagtgtgcagaagatggttactgtagccagggctgcaccaacatagagggtggattc
cagtgctggtgtgtgcagggatacgaacttcgtcccgacaagcgcagttgtaaggccttg
ggcccagaacctgtgctactctttgccaatcggattgatatccgccaggttctgcctcac
cgctctgagtatacactcctgctgaataatctagagaatgccatcgctttggatttccac
cacaataaggagctggtgttctggtctgacgtcactcttgatcgcatcatgcgtgccaac
ctaaatggtagcaatgtggaggaggtggtctcaacagggctagagagtccaggaggtctt
gctgttgattggattcatgacaagctcttctggacagactcagggacatcccgaattgaa
gttgctaatgtagatggcactcatagaaaggtgttgctttggcagaatcttgaaaaacct
cgtgctatagctctgcatcccatggagggcaccatctactggacagattggggtaaccaa
cctcgcattgaatatgccagcatggatggctctagccgatgcatcattgctgacactcat
ctcttctggcccaacgggctgaccattgattatgctggacacagaatgtactgggtagat
gccaagcatcatgtcatagagagggcagacctggatggcaagaaccggagagctgttatc
agccaaggccttccccatccttttgccattaccgtgtttgaagacagcctgtactggacg
gactggcacacaaagagcatcaacagtgccaacaaattcactggcaaaaaccaagagatc
atccgtaacaaactgcacttccccatggacattcataccctgcacccgcagcgtcagcca
gcagcagggagaaatcgctgtggcagggacaatgggggctgctcacacctctgccttcca
agtgccaagaactatacttgtgcctgccccacaggtttccgcaatatcagcagctacatg
tgtgccgaaagtcttgacaagttcctgctttttgctcgaaggacggacatccgtcggatc
agctttgacacggaggacctatctgataaagtcattcctgtgtccaatgtgcgtagtgcc
gtggcactggactggaatgccaaagatgactttgtgtactggacagatgtcagcaccaat
tccattaacagagcaaagtgggatgggagtggacaggaggttgtggtagatactagtttg
gagagtccagctgggctggctattgactgggtcactaacaaattatactggactgatgca
ggaacagataggattgaagtctcgcacagtgatggtacaatgcgtacggtgctgatttgg
gagaacttggacagacctcgggacattgtggtggattccattggagggttcatgtactgg
acagactggggagaaagaccaaagattgaacgtgctggcatggatgcctcgggacgtatt
gtccttatctcttccaacctgacctggcccaatgggttggccattgactatgaatctgag
cagttgtactgggctgatgctggcatgaaaaccatagaatttgccaatctggatggcaca
gacagaaaggtgctcataggaagtcatttgccccatccatttggactgaccctatatggt
gaacgactttattggacagattggcagtcaaagagcattgaaagtgctgacaagaagaca
ggactagatcggaagaccttgcgtgaaaatctggagaacctcatggacattcatgtcttt
cacaggcatcgatcacctgtgcgcacctcatgccgagaaaataatggtggctgtagccat
ctctgcctcctggccccgcttcccacaggccacagctgtgcttgccccactggaatcaat
ctcttggcagatggcaagacctgctcctcagggatgaccagcttcctgatcttcgctaga
cgtacagacattcgcattctgtccctggatatcccatacttcgccgatgttgttgttcca
atcaatgtcaccatgaagaacacaatagcgattgatgttgatccccaggaggggaaggtt
tattgggcggacagcactgtgcggaaagtcagtagagcaaatctcgatggctctgaacat
gaggacatcatcaccacagggttaatgaccatggatggtattgcagtagatgccattggc
cggaagctgtattggacagacactggaactaatcgaattgaagttggtaacctggatgga
tctatgcggaaagttctggtgtggcagaacctggacagtcccagggcaatcgcattgcat
catgagatggggttcatgtactggtcggactggggtgacaatgcaaagctagagcgctct
aacatggatggcacagaccgcctggttctcatcagtaagaatctaggctggcctaatggc
ttggcagtggacaaggctggttcacagctcctctgggctgacgcccacaccgagcgcatt
gaggttgcagatctgcatggcggtctccggcgcacgctggtgtcgccagtgcagcacccc
tacgggctgaccctgttggactcccacatttactggaccgactggcagacgcggagtatc
cacagagctgataagaacactggcagtaatgtaatagtggtgagatccaatcttccagga
ctgatggacatccaggcagtggacagagccagctcactcggctccaacaagtgcgccatg
aagaacggcggttgtacacacctgtgcctcccacggccctctggctcctcctgcgcctgt
cccactggtatcctgctgaaagaggacggacggagctgcgatccgtcccccgagagctac
ttgctgttctctaaccgcgcctccatccgcaggatttccctggacacagatgacttcacc
gatgtctacatccctgtccccaagctcaacaatgtcatctcgttggactacgacagcgtg
gatggcaaaatctactatacagatgtcttccttgatgtcatcagacggtcaaacctgaat
ggcagcagcatggaaactgtgattggtcagggactgaaaaccaccgatggcctcgcagtg
gactgggtagcaaggaatctgtactggacagatactggtcgaaacacaattgaagtagct
agactggatggcagttgcagaaaggtgctgattaatagcagcttgtacgaaccacgagcc
attgcagtctttcctcggaaaggctacctcttctggacagactggggacacattgctaag
attgagcgtgcatacctggacggctcggatcggaaggttctcatcaataccgatctgggc
tggcccaacggactaaccctggactatgacatccgcaggattttttgggtggatgcacac
ttggaccgaatagaaagtgcagatctcaatgggaagttgcgacaagttcttatcagtcaa
gtttcgcacccctttgccctcactcagcacgatcgctggatctactggacagattggcaa
accaaatctattcaacgggtggacaagtattctgggcgaaacaaggagacagtgctggca
aatgcagaagatctgatggacattattgtggtgtctcctcagagacagacaggtagcaac
gcctgtggagtgaataatggaggctgctcacacctctgcttggccaggatctctgacttt
gtctgtgcttgccctgatgacatggaaggacagcattgttccatcaccccagggtttgtt
ccagttctagaaagcaccaccagcagtagtaagaatcgtacagcacagacagcagaccat
cttacccctttggaagcaactgtcagaagctgcttggagaaagatgtcagtcaaggtcta
tgtacacagcaaaatggagctgtgccagcaaccacaggagagggactacacatcagttac
ataattggaggtttcctcagtacccttgctctccttctgttgattgctgtgctgattata
tacaggcacaagaaatccaaatttccagacccggtcatagggaatctgacctatagtaac
ccctcctaccgaacatcaacgcaggaagtgaaacttgaagtaacccccagtcccacagtg
tacaaccagctgctctataaggaggaagcatctgacagcagcttcacaaaagaaaagata
aagatcgtggaggggatttacctgctttccagagatgggaatgagtgggatgacttgaag
cagatgaagccctctcgaggcagcattctgcgggaccatgtctgcataaagacagacact
gtctcactccaggccagcacaggctccctagatgacactgagacggagcaattgctgcag
gaggaacagtccgagagcagcagtgtgaatctgaccaccacaccggagcaccatgcttca
ctgccagacacaggctggaagtgtgtccacaagcctgccaccgaaagccagatctga
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