Geotrypetes seraphini (Gaboon caecilian): 117352208
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Entry
117352208 CDS
T09159
Symbol
FEN1
Name
(RefSeq) flap endonuclease 1
KO
K04799
flap endonuclease-1 [EC:3.1.-.-]
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh03030
DNA replication
gsh03410
Base excision repair
gsh03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
117352208 (FEN1)
03410 Base excision repair
117352208 (FEN1)
03450 Non-homologous end-joining
117352208 (FEN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gsh03032
]
117352208 (FEN1)
03400 DNA repair and recombination proteins [BR:
gsh03400
]
117352208 (FEN1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gsh04147
]
117352208 (FEN1)
DNA replication proteins [BR:
gsh03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
117352208 (FEN1)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
117352208 (FEN1)
DNA repair and recombination proteins [BR:
gsh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
117352208 (FEN1)
Exosome [BR:
gsh04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117352208 (FEN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPG_N
XPG_I
5_3_exonuc
DJC28_CD
Motif
Other DBs
NCBI-GeneID:
117352208
NCBI-ProteinID:
XP_033784383
UniProt:
A0A6P8QAX9
LinkDB
All DBs
Position
19:37541618..37544040
Genome browser
AA seq
381 aa
AA seq
DB search
MGIQGLAKLIADVAPSSIKENDIKSYFGRKVAIDASMSIYQFLIAVRQDGNVLQNDDGET
TSHLMGMFYRTIRMVDSGIKPVYVFDGKPPQMKSGELAKRSERRAEAEKHLVEAQEAGDV
ENIEKFNKRLVKVTKEHNEECKKLLKLMGIPYLEAPCEAEATCAALVKAGKVFAAATEDM
DALTFGTPVLLRHLTASEAKKLPIQEFHLNRALQEMNITQEQFVDLCILLGSDYCETIRG
VGPKRAIDLIKQHKSIEKIVEHLDTKKYPIPENWLHKEARELFLNPEVANTDSVDLKWIE
PDENALVEFMCGEKQFNEDRIRNGAKKLAKSRQGSTQGRLDDFFKVTGSISSSKRKEPAA
KGSTKKKAKTAGTAGKFKKGK
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgggaattcagggactggcaaaacttattgcagacgtagctcccagctctatcaaagag
aatgatatcaagagctacttcgggaggaaagtggcaattgatgcctcaatgagcatctac
cagttcctgattgccgtgcggcaagacggtaatgtgctgcagaacgacgatggtgaaacc
acaagtcatctgatgggcatgttttaccgcactatccgcatggtggacagtggcatcaag
ccagtttatgtatttgatgggaaaccaccacagatgaaatctggcgagctggctaagcgc
agtgaaagaagggctgaggctgaaaagcatctggtggaagcacaggaagcgggtgatgtg
gagaacattgaaaaattcaataagaggttagtaaaggtcaccaaggagcacaatgaggag
tgtaaaaagctgctgaagttgatggggatcccctatctggaagctccttgtgaagctgaa
gctacttgtgctgctctggtcaaagctggcaaagtctttgctgccgccacggaggatatg
gacgccctgacctttggtacaccagtgctgctgagacacctgacagccagcgaggctaag
aaacttcctatccaggagttccacctgaaccgagctttgcaggagatgaacatcacccag
gaacaatttgtggacctctgcatcctgttgggcagtgactactgtgagacaatccgaggg
gttgggcctaagcgagccattgacctgattaaacagcacaagagcattgagaaaatcgtg
gagcacctcgacacgaagaagtaccccattcccgagaactggctgcacaaagaagcacgc
gagctcttcctgaatcctgaagtggcaaacacggattccgttgacctgaagtggattgag
ccggatgagaacgcgctggtggagttcatgtgtggggagaagcaattcaatgaagatcgg
atccgcaacggagccaagaaacttgcaaagagccggcaaggcagcactcaaggacgactg
gatgacttcttcaaagtaaccggttctatcagctcctccaaacggaaagaaccggcagca
aagggctccaccaaaaagaaagcaaagaccgctggaactgctggcaaattcaagaaaggg
aaataa
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