Geotrypetes seraphini (Gaboon caecilian): 117352253
Help
Entry
117352253 CDS
T09159
Symbol
SHANK2
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 2 isoform X1
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
SAM_1
Ank
SAM_2
Ank_4
Ank_5
SH3_2
PDZ_6
SH3_9
PDZ
FERM_f0
SH3_1
PI3K_rbd
SAM_PNT
SAM_CEP-1_C
CBP4
Motif
Other DBs
NCBI-GeneID:
117352253
NCBI-ProteinID:
XP_033784490
UniProt:
A0A6P8PRI0
LinkDB
All DBs
Position
19:complement(6003778..6353068)
Genome browser
AA seq
1841 aa
AA seq
DB search
MMPRSPTSSEDEMAQSYSDYSVESESDSSKEETVYGTVKATAEKPTSRMEDIRSNTLVIR
IVIPDLQQTKCIRFNPNATVWIAKQRILCSLNQSLKDALNYGLFQPACNGRDGKFLDEER
FLREYPQPMSRGVPALEFRYKNRVYKQCFIDEKLIAKLHTKASLRKFMDYIQHHSLEKVV
KMLDRGLDPNYHDPENGETPLTLAVQLDNSMEMVKALRNGGAHLDFRARDGLTALHKAAR
VKNQVALMTILELGASPDYKDSRGLTPLYHTAMVGEDPFCCELLLYEQATVGCKDENGWQ
EIHQACRYGQVQHLEHLLFYGADTRAQNASGNTALHVCALYNQDSCARVLLYRGANKEIK
NYNSQSPFQVAIIAGNFELAEFIKNHKDTDIVPFREAPSYSNRRRGHQNTLTTPHVLLRS
NSDNNLNIANIPDWSAASSTSSHRSLSPQLLQQMQNNPNGTVKTIGSYAQVPRSRSPSLN
RGGEDAKRQPLRHISPNANKEAASALDYQGPKRKLYSAVPGRHFIVVKPYQPQGEGEIPL
HKGDRVKVLSVGEGGFWEGSARGLVGWFPAECVEEIQPKPNESRAETRTDRTKKLFRHYT
VGSYDSFDAASDCIIEEKTVVLTKKDNEGFGFVLRGAKADTPIEEFTPTPAFPALQYLES
VDEGGVAWQAGLRTGDFLIEVNSENVVKVGHRQVVNMIRQGGNHLVLKVVTVTRNLDPDD
TARKKAPPPPKRAPTTALSLRSKSMTSELEELDKVDDTSVSKPLRPVENVPSDSRVATIK
PRPSSRCLPSVTDVNSIYDRQGIAVMPPTVPTSPQGPFLGVPRGTMRRQKSIGITEEERQ
FLAPPMLKFTRSLSMPDTSEDIPPPPATLPPSPPPPISPLPSPSPSPSPAPSPYNSPKSP
APRGYGTIKPSFNQNSGVKGTSPSEVRSVNVGTVARDKGMYYRHETNRYSLDSEDHYNKN
ASSQQNFRNKRSQMPENPYSEVGKIANQAIYVPAKPARRKGMLVKQCNVEDSPEKVCSIP
IPTIIVKEPSTSSSGKSSQGSSMEIDPQSSEQPGQLRPDDNMHANSPFAAAIAGAVRDRE
KRLEARRNSPAFLSTDLGDEDVGLTQSPRLRHSKSIDEGMFSNEDSFRNIVPPASLPLSA
SSANPFNNSESISPPDLDNSRTLNSSSTTKSTENNVISSKSTNMSSSCNYVHPVTGKLLD
PNSPLALALAARDRAMKEQTQESPTTGEMDKADLNKPLYIDTKMRSNIETTFPVTTSANK
QNQRGSLRRQETESKYEPEIGKEEKRLEDKKNMLINIVDTSQQKTAGLLMVHTVDAENAE
DPPADENENLEQNENPENSLVTLPEVNNNEEGPLQPTTAPELLVHPVKAVISVSSVDEPV
LLPFRIPPPPLASVDIDEDFIFTEPLPPPLEFANSFDIPEDLSAAVPTLADLLNQRQNGT
LPPASFNPNLSMHTLESKKQVCLSNCLPASFLPPPEIFDSVTDSGIEETDSRSSSDHHLE
TTSTISTVSSISTLSSEGGENLDTCTVYADGQTFLVDKPPVPPKPKVKPIMNKSNALYKD
ALIEENADSFLIPPPAPPPPPNIIQHSTVKPVPQRTSKLWGDGTEVKSPVLSGPKASIIS
ELNSILQQMNREKSTKLGEGPESPTGTKAASLGTRGTDALSNVSGTRNATITFTIRPGAN
QPITLQNRPPEFETRTAGLRRAPSPVVSPTEIATEIKPAPLSAPATATCLSDIFGLPSPQ
PPGDLFSLTTGRSRSPSPSILQQPISNKPFPTKPIHLWTKQDVADWLESLNLGEHKETFM
DNEIDGTHLPNLQKEDLIDLGVTRVGHRMNIERALKQLLDR
NT seq
5526 nt
NT seq
+upstream
nt +downstream
nt
atgatgccccgcagtccaacgtcaagtgaagatgaaatggcgcaaagctactcggattat
tctgtggaatctgagtccgacagctccaaagaagaaaccgtttatggaaccgttaaggct
acggcagagaaaccaaccagcaggatggaagatattcggagcaacaccctagtcataagg
attgtaattcctgatctacagcagacgaagtgcatacgatttaaccccaatgctaccgtg
tggattgcgaagcagcggattctgtgctctttgaatcagagtttgaaagatgccctcaac
tatgggctgttccagccagcctgcaatggaagggatggaaaatttttggatgaggagcga
tttcttagagagtatccacaaccaatgagcagaggtgttcctgccttggagtttcgctat
aagaaccgagtatataaacagtgcttcattgatgaaaaactaattgccaagctacacaca
aaggccagtctaagaaaattcatggattatatacaacaccactctctggagaaagttgtg
aagatgctggatcgaggattagaccccaactaccatgatcctgaaaacggagaaacgcca
ctgaccttggccgtgcagcttgacaactccatggagatggtaaaagccctgcgaaatgga
ggcgcgcatctagatttcagagccagggatggactgacagctttgcacaaagcggcaagg
gtcaagaaccaagttgccctcatgaccattttagaacttggtgcttcccctgactacaaa
gacagccgtgggctgacacctttatatcacactgctatggtgggagaagatcccttctgc
tgtgaattgctactttatgaacaggcaacagtaggctgcaaggatgaaaatggatggcag
gagatacatcaggcctgccgttatggacaggttcagcatttggaacatttgctgttttat
ggggcagatacgagagcgcagaacgcctctggaaacacagccttgcatgtctgtgctctt
tataatcaggacagctgtgccagggttttgctttaccgaggagccaataaggaaatcaag
aattataacagccagtcaccatttcaggtggccattatagcaggaaattttgaactggct
gaatttataaaaaatcataaggatactgatattgtgccatttagagaggcacccagttac
tcgaatcgaaggaggggacaccagaacaccttgacaacgccccatgtcctgctacgctcc
aacagcgataacaatttgaacatcgccaacatccccgactggtcggccgcctcctctaca
tcttcccaccgcagcctttcacctcagctacttcaacagatgcagaataatcccaatggt
accgtaaaaacaattgggagttatgcacaagtacctcgaagccgatcgccgtcgttaaac
cgaggaggggaggatgcgaagagacagccgctcagacacatcagccctaatgccaacaag
gaagctgcctctgccttggattatcagggaccgaaacgaaagctttacagtgctgtaccc
ggaaggcattttattgttgtgaagccatatcagcctcaaggagaaggggaaatccccctt
cacaaaggggacagggtaaaagtattgagcgtcggagaaggaggattctgggaaggcagc
gcccgggggcttgttggatggtttccagcagagtgcgtagaagagattcaaccgaagcca
aatgaaagcagagcagaaacgcgcacggacagaaccaagaaactgttccgacactatacg
gttggatcctatgacagctttgatgctgcaagtgactgcataattgaagaaaagacagtg
gtcctgacgaaaaaagacaatgaagggtttggatttgtgctcagaggggcaaaagctgac
acgccaattgaagaatttacccccactccagcattccctgctttgcagtacctggagtca
gtggatgaaggtggggtagcgtggcaagctggcttgaggactggagatttcttgattgag
gttaacagtgagaatgtagtgaaggttggccatagacaagtagttaacatgattcggcaa
gggggaaatcatctggtccttaaggtcgtcacagtaaccaggaatcttgatccagacgac
acagctagaaagaaagcccctccacctcccaagcgagcgccaacaactgcactctccttg
cgatcaaagtcaatgacctccgagcttgaagagcttgataaagtggatgatacatcagtt
tccaagcctttaagacctgtggaaaatgtgccatcagactctagagttgcaacgattaaa
ccacgcccttccagcagatgtttgccatcagttacagatgtgaattcaatatatgatagg
cagggtattgctgtgatgccgcccaccgttcccacaagtccccaaggtcctttcctggga
gttcctcgaggtacaatgagaagacagaaatccataggaataactgaagaagagcggcaa
tttttggctcctcccatgctgaaatttacccgaagcctgtctatgccagatacatctgaa
gatatcccacctccaccagcaactttacccccttctccccctcccccaatttctccatta
ccgtctccttctccatcaccttctccagccccatctccatacaattctcccaaatcccca
gcaccgagaggctacggaacaatcaaaccttccttcaaccagaattcaggggtaaaaggt
acttctccttctgaagtcaggtctgtcaatgtgggaacagtagcaagagacaaagggatg
tattacaggcatgaaacaaatcgttattctttagattctgaagatcactacaacaagaat
gcctcatcgcagcaaaattttcgaaacaaaagaagccagatgcctgaaaacccttattca
gaagttgggaagatagcaaaccaagcaatttatgttccagccaagcccgctaggaggaag
ggaatgctagtaaagcagtgcaatgttgaggacagcccagaaaaggtctgttccattcca
atcccaacaattattgttaaagagccttctaccagcagcagtggaaaaagcagccagggc
agcagcatggaaatcgacccacagtcttcggagcagcctgggcagcttcgaccagatgat
aacatgcatgccaatagcccctttgcagcagccattgctggagcagtgagagacagagaa
aagagactggaagctagacgtaattctccagctttcctttccacggatctgggagatgaa
gatgttgggctgacgcagagtccacgactgcgacattcgaagtctattgacgagggaatg
tttagtaatgaagatagttttaggaatattgttcccccagcttctttacctttatctgcg
agttctgcaaatccttttaacaatagcgaatccatcagtccgcctgacctagataattca
aggaccttgaattcatcatcaacaacaaaaagcactgaaaacaatgttatatcttcaaaa
agcactaacatgtccagttcatgtaactatgttcatcctgtcactggaaaattactagat
ccaaattcacccttagccctagctttagctgcaagagacagagccatgaaagagcaaaca
caagagagtccaaccacaggagaaatggacaaagcagatctcaacaagccactctatatt
gatacaaaaatgcggtccaacattgaaactacctttcctgttaccacttctgcaaacaag
cagaaccagcggggttccttaagaagacaagagaccgagagcaagtatgaaccagaaatt
gggaaagaggaaaaaaggctagaagacaaaaaaaacatgctgataaatattgtggatacc
tcgcagcagaagacagctggcttgctcatggttcacaccgtggatgcagaaaatgcagaa
gacccacctgcagatgaaaatgagaacctagaacagaatgagaacccggaaaattctcta
gttacgttacctgaggttaacaacaatgaagaaggtcccttgcaaccaactactgcacct
gagctattagtgcatcccgttaaagctgtcatttctgttagttctgtcgatgagcctgtc
ttattgccatttcgaatacctccgcctcccctggcttcagttgatatagatgaagatttt
atatttacagaaccattgccacccccactggaatttgccaacagctttgacattccagaa
gatctttcagctgcagtccctactctagcagacttgctaaaccagagacagaatggaacc
ctaccacctgcttcatttaaccccaacctatcaatgcatactttagaaagcaaaaaacag
gtgtgtctttcaaactgtttgcctgcctcctttctgccacctcctgaaatttttgacagc
gtcacggactctgggattgaggagacggacagtcgcagtagtagtgaccatcacctggag
acaaccagcactatctcaacagtgtccagtatctctaccttatcctccgaaggtggggag
aacttggacacgtgcacagtctatgcagatgggcaaacatttctggtggacaaaccccca
gtacctcctaagccaaaagtgaagcccataatgaacaaaagcaatgcactttacaaagat
gccctaattgaagaaaatgcagatagctttcttatcccaccgcctgctccaccacctcct
ccaaatattatacagcatagtacagtgaaacctgtaccacaaaggacttctaaattgtgg
ggcgatgggacagaggtcaaaagcccagtactctcaggcccaaaagcaagcattataagt
gaactgaactcaatactgcaacagatgaacagagaaaagtctaccaaacttggggaaggg
ccggaatctccaactggaacaaaagcagcaagcctcggcacaaggggtactgatgccttg
agtaatgtctcaggtactcgaaacgcaactataactttcaccatccggcctggagcgaac
cagcccatcacattgcaaaacaggcccccagagtttgagaccaggacagcgggactgagg
cgagctccaagccctgtggtttcaccaacagagattgccactgaaatcaaaccagctcca
ctctctgctccggctaccgctacctgcctctctgacatatttggccttcccagcccccag
ccccccggggacctcttcagtttgaccacaggacgcagcagatccccttcaccctccata
ttacaacagcccatctcaaataagccctttccaacaaagcccatccacctttggactaag
caagatgtggcggattggttggagagcttgaacctaggagagcataaagagacctttatg
gataatgaaatagatggcacccatttaccaaatcttcagaaggaagatttaatagatctg
ggagtaacccgagtcgggcacagaatgaacattgaaagagctttaaaacaattgctggac
agataa
DBGET
integrated database retrieval system
