Geotrypetes seraphini (Gaboon caecilian): 117352269
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Entry
117352269 CDS
T09159
Symbol
CDHR5
Name
(RefSeq) cadherin-related family member 5 isoform X1
KO
K16505
cadherin-related family member 5
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
gsh04515
]
117352269 (CDHR5)
Cell adhesion molecules [BR:
gsh04515
]
Cadherins
Cadherin related
117352269 (CDHR5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_pro
Cadherin_CELSR2_9th
Chordopox_A13L
Motif
Other DBs
NCBI-GeneID:
117352269
NCBI-ProteinID:
XP_033784520
UniProt:
A0A6P8PRK6
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Position
19:complement(19921230..20016343)
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AA seq
948 aa
AA seq
DB search
MSRTLHTHTMVAISAHPAMFLLLLLTIAPALAQPGTDCWANNADVKIEENNPPGYVVTTL
HTNPGYNLSISLGDHSKEFAINWPNLILTESLDYEALVDKVLLVDLQCTRGSITVKTIII
IVEIMDVNDEVPRFSQTEIIRNVSEDTKVNSSIGLPIYAEDPDKNVIFYVVNGSVEALNH
LTLMSTNNPTIIVRQALDYDQIKSLQLLLYARDTELPGANNHTATATIHVNILDADTKPP
WFQPCTFPNGNSKICINNGYESWVNISEQASGALVLQPGPLLAIDGDTGINEAIIYEIIN
GNQKDIFSIDNVSGNITMRKAAFTLGTIILQVMASQVNDPLKYALTSVQIHVIEQSNFPP
HFQSSHYQGMVPVLAESGSLVMEYGSSSKPLRVFAMDDDFPDKLNPAITYNVQDSSEFRI
TRDGFVLTNAMLNSATTIAFLVKAVDEKNAQEATTNVSVAVTPFTSPDASTTIATTKQAP
DSISSTLLPGTLSKTTRNPSDTTTKTSETNNNSTGSTLKPQRTTWTSTNTGKPATGISSG
SLTTTSRVPPPPVSSISTTKLSGTKQTTTNTGKPATGISSSSLTTTSRVPPPPVSSISTT
KLSGTKPPSTINTGKPATGIPSGSLVTTTHVPPPPVSFISTTKGSGTKQTTIDTGKPATG
ISSGSLGTTTRVPLPPQSSISTAKPLGTTSATTGPLGSGITNSLITAGFTGKTSGSAGSG
GPTLWHTTNPEGLFPTNPQPVQFEYTAMDMAALGSSLAVLLFICVIIVAFLTFKLYGKPK
ATGTDNRSWNTNEKGNFDTDDEESDHNGVAGLNLAFEDVEFSTKEEVLNVSSQPELEEKG
SSEATLSYQESQEELDTDSEKNMKSILTKERRTDEGYKAVWFQEDIKPETREEEDGEDDE
GVRVEEAEEEDEQDDSYDTAWEDHELLVNFSTQTVTDTDTDRNENTLM
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgtactttgcatactcacaccatggtggctatttctgctcatccagccatgttc
ctccttcttctgctcaccatcgctccagctctggcacagcctggcacagattgctgggca
aataacgcagatgtaaaaatagaggaaaataacccaccaggatatgtggttaccactctt
cacaccaatccaggctacaacctttccatttctcttggggaccattccaaagaatttgcg
atcaattggccaaatctgattttgacagagtcattggattatgaggcgctggttgataag
gtcttattggtagacttgcagtgcaccagaggcagcatcacggtaaaaactattattatt
atagtggaaattatggacgtgaatgatgaagtcccacggtttagccagacagaaattatt
cgcaatgtctctgaggacacaaaagtgaacagttccataggtctccctatatatgctgag
gatcctgataaaaatgtcatcttttatgtagttaacgggagtgtggaagcattgaatcat
cttacattaatgagtactaataatccaacaatcatagtgcgccaagcactggactacgac
cagattaagtccctgcagcttctcctgtatgcacgggacacagagctccctggagcaaac
aatcatacagcaacggccacaatacatgtgaacatcctggacgcagacactaagcctccc
tggttccagccctgcacctttcctaatggcaacagcaaaatctgcatcaataacggctat
gagagctgggtgaacatctctgagcaagcgagtggtgctctggttctgcagcctggacct
ctgcttgcaattgatggggacactggcattaatgaagcaatcatatatgaaatcattaat
ggaaaccagaaggacatattttccattgataatgtgagtgggaatataaccatgaggaaa
gcagcatttactttggggacaatcattttacaggtcatggcatcacaagtcaatgacccc
ctgaaatatgcacttacatcagttcaaatacatgtcatagagcaaagcaatttcccacca
cactttcaaagcagccattaccaggggatggtgcctgtgcttgcggaaagcggcagccta
gttatggaatacggcagctccagcaagcctctgcgtgtgtttgcaatggatgatgatttc
cctgataagctgaatcctgccatcacatacaatgttcaggacagcagtgagttccgaatc
acccgggatggatttgttctgaccaatgcaatgctgaactcagcaaccaccattgctttc
ttggtcaaagctgttgatgaaaaaaatgcacaagaggcaactaccaatgtttctgtggcg
gtcacacctttcacaagtcctgatgcatcaactactattgccaccactaagcaagcccct
gattcaatatcttcaactttgctaccaggtacattaagcaagactaccagaaacccctct
gatacgactaccaaaacttctgaaactaataacaattcaactgggtcaacactaaaacct
caaagaactacatggacttccactaacacaggaaagcctgctacaggtatttcatctggt
tccttgaccactaccagtcgtgttcctccccctcctgtatcttcaataagtacaacaaaa
ctctcaggaacgaaacagacaaccaccaacacaggaaagcctgctacaggtatttcatct
agttccttgaccactaccagtcgtgttcctcctcctcctgtatcttcaataagtacaaca
aaactctcaggaacgaaaccaccatcaaccatcaacacaggaaagcctgctacaggtatt
ccttcaggctctttggtcactacaactcatgttcctcctcctcctgtatctttcatcagt
acaactaaaggctcaggaactaaacaaaccaccatcgacacaggaaagcctgctacaggt
atttcctcaggttctttgggcactacaacccgtgttcctcttcctcctcaatcttccatc
agtacagcaaaacctttaggaaccacttctgccactactggaccattaggctctgggatc
accaactctctgattacagcaggctttacagggaagacttcagggagtgctgggtctgga
gggcctactctgtggcacacaaccaaccctgaaggcctatttcctaccaatccacagcca
gtgcaatttgagtacaccgcaatggatatggcagcattggggtcatcgctggcagttcta
cttttcatttgcgtcatcatcgtagctttcctgaccttcaaactctacggaaagcccaag
gcaacaggcacagacaataggagctggaatacaaacgaaaaagggaactttgacactgat
gatgaagaatctgatcacaatggtgttgcaggtctgaacttggcatttgaggacgtggag
tttagtacaaaggaagaagtgctaaatgtgtcctcccaaccagagctggaagagaaggga
agttctgaggccacactgtcctaccaggagtcccaggaggagctagacacagatagtgag
aagaacatgaaatccatccttaccaaggaaaggaggacagatgagggctacaaggcagta
tggtttcaagaagacattaagcctgagaccagagaggaagaggatggggaagatgatgaa
ggggtaagggttgaggaggcagaggaagaagatgagcaggatgatagttatgatacagcc
tgggaagatcatgagctcctagtgaacttcagcacacagactgttaccgacactgacacc
gataggaatgagaatactttgatgtag
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