Geotrypetes seraphini (Gaboon caecilian): 117352573
Help
Entry
117352573 CDS
T09159
Symbol
TRIM36
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM36 isoform X1
KO
K12013
tripartite motif-containing protein 36 [EC:
2.3.2.27
]
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gsh04131
]
117352573 (TRIM36)
04121 Ubiquitin system [BR:
gsh04121
]
117352573 (TRIM36)
Enzymes [BR:
gsh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117352573 (TRIM36)
Membrane trafficking [BR:
gsh04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
117352573 (TRIM36)
Ubiquitin system [BR:
gsh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117352573 (TRIM36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COS
zf-B_box
SPRY
ANCHR-like_BBOX
zf-RING_UBOX
fn3
zf-C3HC4
zf-C3HC4_4
zf-RING_5
Med16_N
Cep192_D3
Motif
Other DBs
NCBI-GeneID:
117352573
NCBI-ProteinID:
XP_033784975
UniProt:
A0A6P8PSN1
LinkDB
All DBs
Position
1:534508787..534722538
Genome browser
AA seq
732 aa
AA seq
DB search
MTESKEINEFGFIVEAIAKNQVAIKNIERELICPSCKELFIHPLILPCQHSICHKCVKEL
LFLCHEDSFTDACSDTSAPGSPRIKVLSPSAERYERIDRLFRSGSKRNALNAKFTTLLCP
GCQHDIELGERGINGLFRNFTLETIVERYRQAARAATAILCDLCKPPPQESTKSCMDCNA
NYCNECFKINHPWGTSKAQHEFVGPTTPFRPKILMCPEHEMERVNMYCELCKRLVCHLCK
LGGTHANHKVTSMSTAYRTLKEKLSKGIGYLISKESEVKNQISELEHLIKRTECNGDKAE
EAASSNFEKLFNILEERKATVLETIRNTKSIKLEKLQNQKEEYQGLLENNGLVGYAQEVL
KETDQSCFVQTAKILHVRIQKAAESLKSFQPAALSSFEEFDLDVSKEEEILGNVTFSKAL
DVPEINEERSRMYNKALISWQQHADTLAADTFVLEYRKLGKDDDLTWKEIEVSGTSQVIS
GLEINSAYTFRVRGFKGSACSPYSKDVTFHTPPAPVFSFLFDDKCGYNKEHLVLNNKRDS
VESMAGFPLLFGAERIQMGCYTCLDYIIGDTGITKGKHFWAFSVEPYSYLVKVGVASDTK
LQEWLQNPRNTSSPRYDQDSGHDSGSEDASFDTSQPFILATIGMRKFFIPKTSNIASDLS
NRVFSMPSRIGVCLDYDKGSIEFYDADSMKCLYERQVECCGTMYPAFALMGGGGVHLEEP
LSLEHLEYPEDM
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaatcgaaagaaataaacgaatttggctttatagtggaagcgatagcgaagaat
caggttgcaatcaagaatattgaacgagagcttatctgtccatcctgcaaagaactgttt
atccatccacttatccttccctgtcagcacagtatttgccataaatgtgtgaaagaactt
cttttcctgtgtcatgaagattcgttcactgatgcatgctcagatacatctgcccctggg
agccctcgaattaaggttctttctccaagtgctgaaagatatgagagaatagaccgactt
tttagatcaggctcaaagcgcaacgctctgaatgctaaattcaccactttattatgtcct
ggttgtcaacatgatatagagcttggagaacgtggcatcaatggtttgtttcgaaacttt
accttggaaactattgttgaacgatataggcaagcagctagagcagcaacggctattctg
tgtgatctttgcaaacctccacctcaagaatcaactaaaagctgcatggattgtaatgca
aattactgcaatgaatgcttcaagataaatcacccttgggggacttcaaaagctcagcat
gagtttgtgggaccaactactcctttcaggccaaagattttgatgtgcccagagcatgaa
atggagagagtaaacatgtattgtgaactttgtaaaaggcttgtttgtcatctttgcaag
ctgggtggaactcatgcaaatcacaaagtcacatccatgagtactgcatatagaacacta
aaggaaaaactttccaaaggtattggttatctcattagtaaagaaagtgaagtgaaaaat
cagatttctgaacttgagcacttgataaagcggactgagtgcaatggagacaaagcagaa
gaagcagcatctagtaattttgagaagctgtttaatattctagaggaacggaaggctaca
gttctcgagacaattcgtaatacaaagtctataaaactggaaaaactacaaaatcaaaag
gaggaataccaggggttattagaaaacaatggtcttgtgggatatgcacaggaagtgctg
aaagaaactgaccagtcctgctttgttcaaacagcaaaaattctccatgtcagaattcag
aaagctgctgaatctctgaaatcctttcaaccagcagctctttcttcttttgaagaattt
gatcttgatgtatcaaaggaagaagagatcctgggaaatgtgaccttttctaaggctctt
gatgtaccagagatcaatgaagaaaggagcagaatgtataacaaggcactgataagttgg
caacagcatgcagacacacttgcagcagatacatttgtacttgagtaccgaaaactaggt
aaagatgatgatctcacctggaaggaaatagaggtgtctggtaccagtcaagtaatctct
ggtcttgaaatcaacagtgcatataccttcagagttcgaggatttaaaggttctgcctgc
agtccttacagtaaggatgtgactttccatacacctccagctccagttttcagtttcctt
tttgatgacaaatgtggatacaacaaagaacaccttgtcctgaacaacaagagagattct
gtggagagcatggctggatttcctctgctgtttggggctgaacgtatccagatgggttgt
tacacatgcctggactatataattggagacactgggatcacaaaagggaagcatttctgg
gctttcagtgtggaaccttattcttaccttgtaaaagtgggtgtagcatcggatacaaaa
ttgcaagaatggctgcagaatcctcgcaatacaagcagtccaaggtatgatcaagatagt
ggccatgatagtgggagtgaagatgcctcctttgacacatcacaacctttcattttggct
acaataggaatgaggaaattcttcatcccaaagacatctaatattgccagtgatttgtct
aacagagttttttctatgccgtcacgtatcggtgtctgccttgactatgataaaggcagc
attgaattctatgatgcagacagcatgaaatgcctttatgaaagacaggtagaatgctgt
ggcacaatgtatcctgcttttgcattaatgggtggtggtggagtccatcttgaagaaccc
ctttcattggaacatctggaatatccagaggacatgtaa
DBGET
integrated database retrieval system
