Geotrypetes seraphini (Gaboon caecilian): 117353476
Help
Entry
117353476 CDS
T09159
Symbol
DDX17
Name
(RefSeq) probable ATP-dependent RNA helicase DDX17 isoform X1
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gsh03041
]
117353476 (DDX17)
Enzymes [BR:
gsh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
117353476 (DDX17)
Spliceosome [BR:
gsh03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
117353476 (DDX17)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
117353476
NCBI-ProteinID:
XP_033785329
UniProt:
A0A6P8PMY9
LinkDB
All DBs
Position
2:complement(256211083..256397064)
Genome browser
AA seq
679 aa
AA seq
DB search
MKAQKNKVTRQQSHGGPRFGSIRGGGGGGLPPPKKFGNPGERLRKKKWDLSELPKFEKNF
YAEHPEVTRLTAFEVEELRRKKEITVRGTDCPKPVFNFHQASFPQYVMDVLMDQNFSEPT
PIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAMVHINHQPYLERGDGPICLVLAPTRE
LAQQVQQVADDYGKSSRLKSTCVYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTN
LRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLRDYV
QINVGNLELSANHNILQIVDVCQESEKDHKLIQLMEEIMAEKENKTIIFVETKRRCDDLT
RRMRRDGWPAMCIHGDKSQPERDWVLTEFRTGKAPILIATDVASRGLDVEDVKFVINYDY
PNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARELVKVLEEANQAINPKLMQLVDHG
RGGGGGMKGGRSRYRIPTANNPNMMYQEECDRRLRGNKERRDQAGGGNFRDRDRGTGDRG
AYSNGANNRDQAGRQNYSSGYGNQNAGYGTQQNQYGYNQGSYGGGGSYGGSGYGAQDYSS
GTYGATGGSGGGGSSGSGRNSQGSGQQQYGGVGRSNQPPQPLMSQQFPQPPANNMMNYMG
QATYQYPPPPPPPPPPSRK
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcacagaaaaataaagtcaccagacaacaaagccatggtggtcccaggtttggt
tcaatccgtggtggtggtggcggtggcctaccaccccccaaaaaatttggcaatcctgga
gagcgtctccgtaaaaagaaatgggatttgagtgagctgccaaaatttgagaagaatttc
tatgcagagcatccagaagttacccggttgacagcttttgaagtggaggaattgcgccgt
aagaaagagattacagtgagaggaacagattgtccaaaaccagtgttcaattttcaccag
gcttcatttccccaatatgtcatggatgttttaatggatcaaaatttttcagagccaacc
cctatccagtgccagggctttccattagctctgagtggtcgggacatggtgggcattgca
caaactggttctggcaagactttagcgtatctgcttcctgctatggttcacatcaaccac
cagccatacttggagagaggtgatggcccaatttgcttggttctggctccaacacgggaa
ttagcacagcaggtgcagcaggttgctgatgactatgggaaatcatcaagactgaaaagc
acctgtgtttatggaggagcaccaaagggtcctcaaataagagacttggagagaggtgtg
gagatctgtattgctactccagggcgcctcattgacttcctggaagcagggaagacaaat
ctccgccgctgtacatacttggtgttggatgaagctgacagaatgctggacatgggtttt
gaaccacagattcgtaaaattgttgatcaaattcggcctgacaggcagaccctgatgtgg
agtgcaacttggccaaaggaggtgcgccagctagcagaggacttcttacgtgactatgta
caaattaatgtggggaacttggaactgagtgctaaccataacatcctgcagattgttgat
gtgtgccaggaaagtgagaaggatcacaagttgattcagttgatggaggaaataatggca
gaaaaagagaataagacaatcatctttgtagaaactaaacgccgctgtgatgatctcaca
cgtagaatgaggcgggatggctggccagccatgtgtatccatggagataagagtcagcca
gagagagactgggtgcttactgaatttcgaacagggaaagcgccaatcctcattgccaca
gacgttgcttctcgtggtttagatgtggaagatgtcaagtttgtgatcaactacgactat
cccaacagttcagaggactatgtacataggattggccgtacagctcgtagcaccaataag
ggcacagcctatacattcttcacacctggtaacctgaagcaagctagagagctggtcaag
gttttggaggaggccaatcaggccatcaatcctaaactcatgcagctggtggaccatggc
cgtgggggtgggggtggaatgaaagggggtcgatcacgctatcgtattcccacagccaac
aatccaaatatgatgtaccaagaggagtgtgatcgtagacttcggggtaacaaggaaagg
cgagaccaggctggtggtggtaattttcgagacagggacagaggcactggtgaccgtgga
gcatacagtaatggagctaacaatcgagatcaagcaggtcgccaaaattatagctctggt
tatgggaatcagaacgctggatatgggacacaacagaaccaatatggctacaatcaaggc
agctacggaggagggggcagctatggtgggagtggctatggggcccaggattacagctct
ggaacttatggagccactggtggtagtggtggtggcggctcctctgggagtgggagaaac
tcacaaggttctggccagcagcagtacggtggtgtgggacgatcaaaccagccgccgcag
ccgctgatgtctcagcagtttcctcaacctcccgctaataatatgatgaattatatggga
caagccacctatcagtatccacctccacccccaccacctccccctccttcaaggaaatga
DBGET
integrated database retrieval system
