Geotrypetes seraphini (Gaboon caecilian): 117353497
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Entry
117353497 CDS
T09159
Symbol
PDGFB
Name
(RefSeq) platelet-derived growth factor subunit B
KO
K17386
platelet-derived growth factor subunit B
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04010
MAPK signaling pathway
gsh04020
Calcium signaling pathway
gsh04510
Focal adhesion
gsh04518
Integrin signaling
gsh04540
Gap junction
gsh04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117353497 (PDGFB)
04020 Calcium signaling pathway
117353497 (PDGFB)
09133 Signaling molecules and interaction
04518 Integrin signaling
117353497 (PDGFB)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117353497 (PDGFB)
04540 Gap junction
117353497 (PDGFB)
09142 Cell motility
04810 Regulation of actin cytoskeleton
117353497 (PDGFB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
gsh04052
]
117353497 (PDGFB)
00536 Glycosaminoglycan binding proteins [BR:
gsh00536
]
117353497 (PDGFB)
Cytokines and neuropeptides [BR:
gsh04052
]
Cytokines
Growth factors (RTK binding)
117353497 (PDGFB)
Glycosaminoglycan binding proteins [BR:
gsh00536
]
Heparan sulfate / Heparin
Growth factors/receptors
117353497 (PDGFB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDGF
PDGF_N
Col-Pyo_DNase
Motif
Other DBs
NCBI-GeneID:
117353497
NCBI-ProteinID:
XP_033785362
UniProt:
A0A6P8P7Y3
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All DBs
Position
2:complement(258827333..258902190)
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AA seq
250 aa
AA seq
DB search
MSFGLFVLSLWWYLILAAAEGDPIPQEVYMKLRGSSIHSVADLQRLLQIDSVENEDDYLD
TDQNSMERVSRQNVTVSRVRRSLVVAAQPAEIAECKIRTEVFEISRSLVDPSNANFLVWP
PCVEVQRCSGCCNTKAMHCTPSSVHLRHIQVNKIEIVRKKSMFHKVVVTLEDHLACRCEP
VAFAPPPGQHAMAKSHEARGHSPGIASHWSRATATPASWKERATLRPPKRKHRKLKHVSD
KKTLKELLST
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgagttttgggttgtttgtcctctctctgtggtggtacctgatcttagctgctgcagag
ggtgatcctatcccccaggaagtttacatgaagctgaggggcagctcaattcattccgtc
gctgacctccagcgtctcctgcagatagactccgtagagaatgaggacgattatttggat
accgatcaaaactcaatggaaagagtttccaggcagaacgtgacagtatcacgagtcaga
cgcagcttggttgtagcagctcagccagctgagattgcagagtgcaagatccggacagaa
gtgtttgagatatcccggagcctggtggacccttccaatgccaactttctagtatggccg
ccatgcgtagaagtgcaacgctgctcgggctgctgcaataccaaagccatgcactgcaca
ccttccagtgttcacctaagacacatccaggtgaataaaatcgagattgtgcgtaagaag
tctatgtttcataaagtcgttgtgactttggaggatcacctggcatgccgatgcgagcct
gttgcatttgccccacctcctggtcaacatgccatggccaagtcccacgaagcacgaggt
cattctccagggattgctagtcactggtccagagcaacagccacccctgcctcatggaag
gaacgagctactctccgaccacccaaacggaaacatcgaaagttgaaacatgtatcggac
aaaaagacactgaaggagctgctcagcacatag
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