Geotrypetes seraphini (Gaboon caecilian): 117353497
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Entry
117353497 CDS
T09159
Symbol
PDGFB
Name
(RefSeq) platelet-derived growth factor subunit B
KO
K17386
platelet-derived growth factor subunit B
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04010
MAPK signaling pathway
gsh04020
Calcium signaling pathway
gsh04510
Focal adhesion
gsh04540
Gap junction
gsh04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117353497 (PDGFB)
04020 Calcium signaling pathway
117353497 (PDGFB)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117353497 (PDGFB)
04540 Gap junction
117353497 (PDGFB)
09142 Cell motility
04810 Regulation of actin cytoskeleton
117353497 (PDGFB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
gsh04052
]
117353497 (PDGFB)
00536 Glycosaminoglycan binding proteins [BR:
gsh00536
]
117353497 (PDGFB)
Cytokines and neuropeptides [BR:
gsh04052
]
Cytokines
Growth factors (RTK binding)
117353497 (PDGFB)
Glycosaminoglycan binding proteins [BR:
gsh00536
]
Heparan sulfate / Heparin
Growth factors/receptors
117353497 (PDGFB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDGF
PDGF_N
Col-Pyo_DNase
Motif
Other DBs
NCBI-GeneID:
117353497
NCBI-ProteinID:
XP_033785362
UniProt:
A0A6P8P7Y3
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All DBs
Position
2:complement(258827333..258902190)
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AA seq
250 aa
AA seq
DB search
MSFGLFVLSLWWYLILAAAEGDPIPQEVYMKLRGSSIHSVADLQRLLQIDSVENEDDYLD
TDQNSMERVSRQNVTVSRVRRSLVVAAQPAEIAECKIRTEVFEISRSLVDPSNANFLVWP
PCVEVQRCSGCCNTKAMHCTPSSVHLRHIQVNKIEIVRKKSMFHKVVVTLEDHLACRCEP
VAFAPPPGQHAMAKSHEARGHSPGIASHWSRATATPASWKERATLRPPKRKHRKLKHVSD
KKTLKELLST
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgagttttgggttgtttgtcctctctctgtggtggtacctgatcttagctgctgcagag
ggtgatcctatcccccaggaagtttacatgaagctgaggggcagctcaattcattccgtc
gctgacctccagcgtctcctgcagatagactccgtagagaatgaggacgattatttggat
accgatcaaaactcaatggaaagagtttccaggcagaacgtgacagtatcacgagtcaga
cgcagcttggttgtagcagctcagccagctgagattgcagagtgcaagatccggacagaa
gtgtttgagatatcccggagcctggtggacccttccaatgccaactttctagtatggccg
ccatgcgtagaagtgcaacgctgctcgggctgctgcaataccaaagccatgcactgcaca
ccttccagtgttcacctaagacacatccaggtgaataaaatcgagattgtgcgtaagaag
tctatgtttcataaagtcgttgtgactttggaggatcacctggcatgccgatgcgagcct
gttgcatttgccccacctcctggtcaacatgccatggccaagtcccacgaagcacgaggt
cattctccagggattgctagtcactggtccagagcaacagccacccctgcctcatggaag
gaacgagctactctccgaccacccaaacggaaacatcgaaagttgaaacatgtatcggac
aaaaagacactgaaggagctgctcagcacatag
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