Geotrypetes seraphini (Gaboon caecilian): 117353612
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Entry
117353612 CDS
T09159
Symbol
TAF4B
Name
(RefSeq) transcription initiation factor TFIID subunit 4B isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
117353612 (TAF4B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gsh03021
]
117353612 (TAF4B)
03036 Chromosome and associated proteins [BR:
gsh03036
]
117353612 (TAF4B)
Transcription machinery [BR:
gsh03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
117353612 (TAF4B)
Coactivators
SAGA/TFTC/STAGA complex
117353612 (TAF4B)
Chromosome and associated proteins [BR:
gsh03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
117353612 (TAF4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
Staph_reg_Sar_Rot
Motif
Other DBs
NCBI-GeneID:
117353612
NCBI-ProteinID:
XP_033785656
UniProt:
A0A6P8QFV4
LinkDB
All DBs
Position
2:complement(136437652..136590523)
Genome browser
AA seq
1304 aa
AA seq
DB search
MGRLLVAARAGLSCKSSCSVVTCGGVKGSTGITTMALPSSTMTSSPLVTREKAVTHSTQA
ALAITPTFMIVNPSAMAASKTNDSASKLPASWRAATNMTPSALMASDKAAMPATIVTPTM
LVDPCRAVTPATVITSSTLVAPASDVTLTVTPSTLVAPARPAMPTTVVASSLLVASARPA
TVVTPPTLVASARPAVPTTVVASPTLVASARPATVVTTPTLVASARPAVPATVVAPPMLV
ASARPAVPATVVAPPMLVASARPAVPATVVAPPTLVASARPAVPATVVASPTLVASARPA
TVVTPPTLVASARPAVPATVVAPPMLVASARPAVPATVVAPPTLVASARPAVPAIVVASP
TLVASARPATVVTPPTLVASARPAVPTTVVASPTLVASARPATVVTTPTLVASARLAVPA
TVVASPTLVASARPATVVTTPTLVASARLAVPATVVAPPMLVASARPAVPATVVAPPTLV
ASARPAVPATVVAPPTLVASARPATVVAPPTLVASARPATVVAPPTLVASARPATVVAPP
TLVASARPATVVAPPTLVASARAAPPATVVTPSMLVASARAATPATVVTPSMLVASARAA
TPATVVTPSMLIASARAATPATVVTPSMLIASARAATPATVVTPSMLVASARAAMPATVV
TPSMLVASARAAMPATVVTPSMLVTPARAATPVTIVTPSMLVTPARAATPATVVTPMLVA
SSRTAAPATIVSSSTAVATTRAATSSALITPARTGMPATTVDPSTLAGPSRTLVPATLIA
QGSTLPPKVISVKADGSTVAQRVQAASSTEILDNVKKCKSFLATLIKLACSGPQSQEMGQ
NVKNLVQNLLEGKIEPEEFTKKLYTELKSSPQPYLVPFLKKSVPSLRQLMPDSLSFIQQC
LQQQPQTVGASTNSTCLVTPKPSLQPVKQSSGATPITLKLHQPCSVPIQPNSMPQAVKVK
QLVIQQPAGVVGKQVVGLPPTTTLIVSKPGESRMLLNTIIQAKQFPAASILKQVTLPGNT
VLSLGASPAEKNNIKENVTTSFRTKVFTCRDEDDINDVASMAGVNISEENAGILATHSEF
VGRIIQSTVDEPFLFKAALQKKILDIGKRHNVVELSSEVVNLVSHATQERLRDIIEKLTV
VAQHRCTIYKDSEKYLKSGDTRSQLKFLEQLDQLEKQRKNEEEREILLRVAKSRSNKEDP
EQQRLKQKAKEMQQIELAQIQYRDANLAALAAIGPRRKRSLDSLSMPSGCEDASSVLPGS
FVSGLTKTLARPRITRVCLRDLIFCMEQERKTKYSRTLYGALLK
NT seq
3915 nt
NT seq
+upstream
nt +downstream
nt
atgggaaggcttctagttgcagcaagggcggggctgagttgcaaaagttcgtgttcagtg
gttacgtgtggtggtgtcaaaggatctactggaataactacaatggctttgccttcaagc
acgatgacatcttcaccgcttgtgacccgtgaaaaagctgttacccactcaacacaggca
gctcttgcaataactccaacgttcatgattgtgaacccctcagcaatggcagcctctaaa
acaaatgattctgcctcaaaattgccagcctcttggagagctgcaacaaatatgaccccc
tcagcgctgatggcctctgataaagctgcgatgcctgcaacaattgtcactccaacaatg
ttggtagacccttgcagagctgtgacacctgcaacagtcattacctcatcaacgctggta
gcccctgcaagtgatgtgacattaacagtcaccccatcaacgctggtagcccctgcaaga
cctgcgatgcctacaacagttgtcgcctcatcactgctggtagcctctgcaagacctgca
acagttgtcaccccaccaacgctggtagcctctgctagacctgcagtgcctacaacagtt
gtcgcctcgccaacgctggtagcctctgcaagacctgcaacagttgtcaccacaccaacg
ctggtagcctctgctagacctgcagtgcctgcaacagttgtcgccccaccaatgctggta
gcctctgctagacctgcagtgcctgcaacagttgtcgccccaccaatgctggtagcctct
gctagacctgcagtgcctgcaacagttgttgccccaccaacgctggtagcctctgctaga
cctgcagtgcctgcaacagttgtcgcctcaccaacattggtagcctctgcaagacctgca
acagttgtcaccccaccaacgctggtagcctctgctagacctgcagtgcctgcaacagtt
gtcgccccaccaatgctggtagcctctgctagacctgcagtgcctgcaacagttgttgcc
ccaccaacgctggtagcctctgctagacctgcagtgcctgcaatagttgtcgcctcacca
acattggtagcctctgcaagacctgctacagttgtcaccccaccaacgctggtagcctct
gctagacctgcagtgcctacaacagttgtcgcctcgccaacgctggtagcctctgcaaga
cctgcaacagttgtcaccacaccaacgctggtagcctctgctagacttgcagtgcctgca
acagttgtcgcctcaccaacgctggtagcctctgcaagacctgcaacagttgtcaccaca
ccaacgctggtagcctctgctagacttgcagtgcctgcaacagttgtcgccccaccaatg
ctggtagcctctgctagacctgcagtgcctgcaacagttgtcgccccaccaacgctggta
gcctctgctagacctgcagtgcctgcaacagttgtcgccccaccaacgctggtagcctct
gctagacctgcaacagttgtcgccccaccaacgctggtagcctctgcaagacctgcaaca
gttgtcgccccaccaacgctggtagcctctgcaagacctgcaacagttgtcgccccacca
acgctggtagcctctgcaagacctgcaacagttgtcgccccaccaacgctggtagcctct
gctagagctgcaccgcctgcaacagttgtcaccccatcaatgctggtagcctctgctaga
gctgcaacgcctgcaacagttgtcaccccatcaatgctggtagcctctgctagagctgca
acgcctgcaacagttgtcaccccatcaatgctgatagcttctgctagagctgcaacgcct
gcaacagttgtcaccccatcaatgctgatagcttctgctagagctgcaacgcctgcaaca
gttgtcaccccatcaatgctggtagcttctgctagagctgcaatgcctgcaacagttgtc
accccatcaatgctggtagcttctgctagagctgcaatgcctgcaacagttgtcacccca
tcaatgctggtaacccctgctagagctgcgacgcctgtaacaattgtcactccatcaatg
ctggtaacccctgctagagctgcgacgcctgcaacggttgttactccaatgctggtagcc
tcttctagaactgcggcgcctgcaacaattgtctcctcctcaacagcggtagccactaca
agagctgcaacatcttcagccctgataactcctgcaaggactgggatgcctgcaaccact
gtggatccctcaacattggcaggcccttcaagaactttggtgcctgcaacactaatagca
cagggatcaactcttccgccaaaagtcatatctgttaaagctgatgggtcaacagttgca
caaagagtacaggccgccagttccacagaaatacttgataatgtgaagaagtgcaaaagt
tttcttgccacattaataaaattggcatgtagtggaccacagtcacaagagatgggacag
aatgtgaagaatctggtacaaaatctcttggagggaaaaattgaaccagaagagtttaca
aaaaaattatacactgaactgaagtcttcaccacagccctatctggtcccttttctgaag
aaaagtgtgccctccttgcgccagctaatgccagattccctgagttttattcagcagtgt
cttcaacagcagccgcagactgtgggagccagcactaattctacctgtctggtcacacca
aagccatctcttcagcctgtaaaacaaagcagtggggcaacgcctatcacactgaaactt
caccaaccttgctctgtccctatccagccaaacagcatgccacaggcagtcaaagtgaag
cagctggtgattcagcagcctgcaggagtagttggaaagcaagtggttggtcttcctccg
accaccaccctgatcgtcagtaagccgggagaaagcagaatgctcttgaacacaataatt
caagccaagcaattcccagcagcatccattctgaaacaagttaccctgccaggaaataca
gttctgtcacttggagcatctcctgctgagaagaataatatcaaagaaaatgttacaaca
tccttcagaacaaaagtattcacatgtagagatgaagatgacatcaatgatgtggcttcc
atggctggtgtcaacataagtgaagaaaatgccggcatcttagcaactcattctgaattt
gttggcagaattattcaatcaactgtagatgaaccattcctcttcaaagctgctcttcaa
aagaaaatattagatataggtaaaagacataatgttgtggaacttagctctgaagttgtg
aacctagtctcccatgctactcaggagcggctgcgagatatcattgagaaactcactgtg
gttgcacagcatcgctgtacgatctataaggacagtgaaaagtacctcaagtctggtgac
accaggtcacagcttaaatttttagagcaactggatcagcttgagaaacagcgaaagaat
gaagaggaacgagaaatactattgagggtggctaaaagccgttctaataaagaagaccca
gaacagcagcgattaaagcagaaagctaaagagatgcagcagatagagctagcacagatt
cagtacagagatgccaatctcgcagctttggctgccattgggccaaggaggaaaaggtca
ctagattccctaagcatgccatctggctgtgaggatgcaagcagtgtgctgcctggatca
tttgtctcaggccttacaaaaactttggcccgtccgagaataacacgagtgtgtctcagg
gatctgatattctgcatggagcaagaaaggaagacaaaatattcacgaactttatacggt
gctcttcttaaatga
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integrated database retrieval system
