Geotrypetes seraphini (Gaboon caecilian): 117353621
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Entry
117353621 CDS
T09159
Symbol
TRPA1
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gsh04040
]
117353621 (TRPA1)
Ion channels [BR:
gsh04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
117353621 (TRPA1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ank_4
Ank_5
Ion_trans
DUF7009
ANK_LRRK2
Motif
Other DBs
NCBI-GeneID:
117353621
NCBI-ProteinID:
XP_033785675
UniProt:
A0A6P8PUA4
LinkDB
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Position
2:98704693..98904491
Genome browser
AA seq
1094 aa
AA seq
DB search
MKRSLKKFMRPVTEKREELYQEMILKQDACQKCPSTNIFELISLGDEMRLRSFILKNPNS
LSSRNDEKATPLHYVAASGNLEFMQMIMDESSDEVLNVMNCEGNTPLHWAVEKNQLESVK
VLLSRGANPNILNYYLKAPLHMAVQICHNEIVEVLASHSSTDINLEGEVGNNAVMMTCYQ
DNAEAIDILLRHGAKLCKRNKMGCYPIHLAAYCGATKCLEVILKKGEEIGNPIEDHINFT
NNGKCSPLHLAVQNGSLEIVRKCIAFGAKIDLKQNDNATSLHFAATQGATEIVKLMVASY
TSDKSIVNLQDGNNETPLHKSALFDHCELAEYLISMGADLNSIDNDSRSPLLLAVTCAAW
KVVNLLLLKGANVKIRDQTGRNFLHLTVLQPGGLKHLNKEFLQLDEIKELVSQEDQDGCT
PLHYACREGVPGSVNNLLGLNVSIYSKSKNRRSPLHFAASYGRINTCQRLLRDLTDTRLL
NEGDDKGMTPLHMAAQNGHEKIVRLLLKKGALLLCDYKGWTALHYAAYRGYSRTMETLLE
TYVTMMDKGDQNGDTSLHIAALEGHAKVVGLLLDRGAAIIWNKVQASFLHNAIRNGKKEV
VCCTIQNDRWDEAMQTFSHNSPYRCPLLEMIDHLPESFKFLLDKCMIESPGDKKSQEFCI
EYSFKYLQCPLAFIKKGKEDLNVDYEPLIFLNAMVRNNRVELLSHPVCKQYLRMKWLAYG
LKAHILNLAVYSLGLIPLTLLILNTVPPSYVNRTVNHENGCLQIKNTYFSRVCVSLLFIM
SVFGILKEIVQIIQQRVKYLMDGTNIIDWTIYVSSLCFVLPLLIDPTNTINWQWQSGSLA
VFLSWVNFLIYLQRFESYGIYIVMFWEILRTLLRIIILFFFIILAFGLSFYILLYHQVTF
SNPYFSLMQTFAMMLGDINYQEGFLQPLINNEIQYPFMAFLHLILFTLLMPILLMNLLIG
LAVGDIAEVQRNAVLKRMAMQVSLHTSLEKKLPYWCLKRVDQMFIRTYPNKPKLCGLMGF
FQSIFLAEEITMDVQNSDKMELELWKQKNRLKYISTVLQKQHELLKLIIEKMKICSEAVD
EDEHDLFQTRKPKK
NT seq
3285 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgctctctgaagaagttcatgcgccccgtgacagagaagcgagaggagctctac
caggagatgatcctcaaacaggatgcctgccagaagtgcccttccaccaacatctttgag
ttgatttcattgggagatgagatgagattaagaagcttcatcctgaagaatcctaatagt
ttaagtagtcggaatgatgagaaggcaactccactgcattatgtggcagcaagtggtaat
cttgaattcatgcaaatgattatggatgagtcctctgatgaagttttaaatgtgatgaat
tgtgagggaaatacaccccttcactgggctgtggagaaaaaccagctggaaagtgtaaag
gtacttctcagcagaggtgctaaccccaacattttgaactattatttgaaggcacctctt
catatggctgtccagatatgtcacaatgagatagttgaggtgttggcttctcatagcagt
acagatattaatctagaaggagaagttggaaataatgcagtgatgatgacatgctatcaa
gacaatgctgaagcaattgatatcctgctgagacatggagcaaagctatgcaaaagaaac
aaaatgggatgttaccctattcatttggctgcatactgtggtgcaacaaagtgtttggaa
gtcattttaaaaaaaggtgaagagatcggcaatcctatcgaggaccacatcaattttacc
aataatggaaagtgcagtcctctacacctggcggtccagaatggaagtctggaaattgtt
agaaagtgtattgccttcggagcaaagattgatctaaaacagaatgacaatgccacatca
cttcattttgctgccacgcagggagcaactgagattgtcaaattaatggtggcttcttac
accagtgataaatctattgttaaccttcaggatgggaataatgagaccccacttcacaag
tctgcattgtttgatcactgtgaactggcagaatatttgatttcgatgggagcagatctc
aatagtattgacaatgattctcggtcaccccttctgttggccgttacttgtgcagcctgg
aaagttgtcaacttactacttctaaaaggagcaaatgtaaaaataagagaccaaactggt
cgaaatttcctgcatttgactgttctgcagcctggaggtttgaaacatctgaataaagaa
tttctccagctggatgaaattaaagaactggtaagtcaagaagaccaagatggttgcact
cctctacattatgcatgcagagagggtgtacctggatcagttaacaatttacttggcttg
aatgtctccatctactccaaaagtaaaaatagaagatctccattgcactttgcagcaagc
tatggacgtattaatacctgccaacgacttttacgagacttgacagatacaagactttta
aatgaaggagatgataagggaatgactcccctccatatggcagctcaaaatggtcatgaa
aagatagtaaggcttctcttgaagaaaggtgcactccttctatgtgattataaaggatgg
acagccttacattatgctgcctatagaggatattcacgaacaatggagacccttctggaa
acatacgtaaccatgatggataaaggggatcagaatggagacacatcacttcatatagct
gctctagaaggtcacgcaaaagtggtaggacttcttcttgacagaggagctgccataata
tggaacaaagtccaggcttcctttctacataatgcaatacgcaatgggaaaaaggaagtc
gtttgctgtacaattcagaatgacaggtgggatgaagccatgcagacattttcacataat
tctccctataggtgccctttactggaaatgattgatcaccttcctgaaagttttaagttt
ctcctagacaaatgtatgattgagtctccaggagacaagaaaagccaagaattctgtatt
gaatacagcttcaaatatctccagtgtccattggcatttataaagaaaggaaaggaagat
ttgaatgtagattatgaaccactcatttttcttaatgccatggtacgtaataaccgtgtg
gaactcctttctcatcctgtatgtaaacagtatttgcgtatgaaatggctggcttatgga
ttaaaggcccacattcttaacctagctgtttattcacttggtctgatacccttgacactt
ctgattttgaatacagtaccgccttcttatgtaaatagaacagtcaatcatgaaaatgga
tgcttacaaatcaagaatacctatttttcaagagtgtgtgtgagtctgctttttatcatg
agtgtatttggaatcctcaaggagatagtacagatcatccagcagcgagttaaatatttg
atggatggtactaatataatagactggacaatctacgtttcaagcctatgttttgtttta
cctttgctgattgatcccacaaataccataaactggcagtggcagagtggctcacttgct
gtgtttttgtcctgggtgaacttcttgatttatcttcagaggtttgaaagttatggaatc
tacatagtaatgttctgggaaattctgaggacattgctgcgtattatcatcctgttcttc
ttcattattttggcttttggactcagtttctacattcttttgtaccaccaggtaaccttc
agcaatccatacttctccttaatgcagacatttgccatgatgctgggagatattaactat
caggaaggtttcctccagccactgattaacaatgaaatacaatatccattcatggctttt
ctacacctaattctattcaccctgcttatgccgattcttcttatgaacctacttattggt
ttggctgttggagatattgcggaagtacaaaggaatgctgtactgaagaggatggctatg
caggtcagtctccatactagcttagagaagaaattgccttattggtgcttaaaaagagtg
gaccagatgttcatccgtacatatccaaacaaacccaagctatgtggactgatgggtttt
ttccaatctatatttttggctgaagaaataacaatggatgtacaaaattcagataaaatg
gagcttgaactttggaagcaaaagaacaggctcaagtacatttcaacagtgcttcaaaaa
caacacgagctccttaagttgatcatagagaaaatgaagatttgctcagaggctgtcgat
gaagacgagcatgacttgtttcaaaccagaaaacccaagaaatag
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