Geotrypetes seraphini (Gaboon caecilian): 117353624
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Entry
117353624 CDS
T09159
Symbol
IRX1
Name
(RefSeq) iroquois-class homeodomain protein IRX-1
KO
K24889
iroquois-class homeodomain protein IRX
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gsh03000
]
117353624 (IRX1)
Transcription factors [BR:
gsh03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
117353624 (IRX1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
117353624
NCBI-ProteinID:
XP_033785677
UniProt:
A0A6P8P8W3
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Position
2:286817571..286822570
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AA seq
465 aa
AA seq
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MSFPQLGYPQYLSAGQAVYSSERPGVLAAAAAAAAAAAASGSGRPGGSELGSGSAAAVTS
VLGMYASPYNAPNYSAFLPYATDIALFSQMGSQYELKDNPGVHPATFAAHTAPGYYPYSQ
FQYGDPGRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR
RRLKKENKVTWGSRSKEDDNLFGSDNECDPEKNEDEEEIDLESIDIDKIDENDGEQSNEE
EDEKIERIKRNEKESLEKENDLLSGSEGHKPKDSFSLVKDSHEGSKSRILSNGVQIGLQM
PNHNKPKIWSLAETATSPDGTVLKSSPPPSQLNPPSQMQHPAFLPSHGLYTCQIGKFHNW
TNGTFFTQSSLLNVRSLLGVNHHHAAHHSPHHLQAQHQSTLTATLGTLSSEKPSEKTSPK
PTERENISRPDSPPQQLKSPFQPVHDNALSQQEGAPRILTALPSA
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgtccttcccgcagctgggttacccgcagtacctgagcgccggccaagcggtgtacagc
agcgagaggcccggagtgttggctgcggccgcggcagccgcggcggcggcggcagcctcg
ggctcgggccggccggggggaagcgaactgggaagcggctcggcggctgccgtcacctcg
gtgctgggcatgtacgccagtccctacaacgcccccaactacagcgccttcctgccctac
gccaccgacatcgcgctcttctcgcagatgggttctcagtatgaactgaaggataatcct
ggtgtccatcctgctacttttgctgctcatactgctcctggatattatccttacagtcag
tttcagtatggagatccaggtcggcctaagaatgccactagagagagcaccagtactttg
aaggcctggctaaatgaacacaggaagaacccttatccaaccaaaggtgagaagatcatg
ctggccatcatcaccaagatgaccctgacccaggtatccacctggtttgccaacgctagg
aggaggctcaagaaagagaacaaagtaacttggggttcaaggagcaaggaggacgacaac
ctctttggtagtgacaatgaatgtgatcctgaaaagaatgaagacgaggaagaaattgat
ctggaaagcatagacattgataaaatcgatgaaaatgatggggaacaaagtaatgaagaa
gaggatgaaaaaatagagcgcataaaaagaaatgaaaaggaaagcttggagaaggaaaat
gacttattatcgggatctgaaggacataaacccaaagattctttctctctggtaaaagat
tcccatgagggcagtaaatcaagaattttaagcaatggtgtgcagattggtttacagatg
ccaaatcacaacaagcccaagatctggtcgttggcagaaacagcaaccagtcctgatgga
acagtcctgaagtcttctcctcctccatcccaactgaatccaccttctcagatgcagcac
ccagccttccttcctagtcatggactttacacgtgccagattggcaagtttcataattgg
acaaatgggacattctttactcagagttccctcttaaatgtgaggtccttattgggagta
aatcaccaccatgcagctcatcattccccccatcaccttcaggcccagcaccaatctaca
ttaacagcaacactgggaacactcagcagcgaaaaaccctcagagaagaccagccctaag
cccacagaaagagaaaatatatcaaggcctgactccccgccacagcagctaaaatcacct
tttcagcctgttcatgacaatgctctgtctcagcaagaaggggcaccacgcattttaacc
gctcttccatctgcctga
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