Geotrypetes seraphini (Gaboon caecilian): 117353672
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Entry
117353672 CDS
T09159
Name
(RefSeq) transcription factor Sox-17-alpha-A-like
KO
K04495
transcription factor SOX17 (SOX group F)
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
117353672
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gsh03000
]
117353672
Transcription factors [BR:
gsh03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
117353672
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
Sox17_18_mid
HMG_box_2
HMG_WDHD1
HTH_24
Motif
Other DBs
NCBI-GeneID:
117353672
NCBI-ProteinID:
XP_033785767
UniProt:
A0A6P8P959
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All DBs
Position
2:complement(118372553..118375039)
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AA seq
391 aa
AA seq
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MSSPDAGYASDEQSQGQCSVARMMPAVGHCQWAAESLSPLGAGKQKSETGSSNSGNRGKA
EPRIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKSLSLVEKRPFVEEAERL
RVQHMQDHPNYKYRPRRRKQVKRIKRAEPGFLHGIAEQQGTRMSGEGRMCLESLGFHEQE
YRPVQHSQLLPMNQYRDCQALAPHYESSYNLPTPETSPLDMVETDPVFFASHFQENCQMM
PYNYHQVGDYSSQQESHTNGTLGRHLSPPDQIVQVNSLQSVMSCQASPHIYFNQLCPPGN
ARSHQVQQAGQPSPPPESHPMDNLGHLQQAELLGDVDHSEFEQYLHFVSSKPEPGLVFHG
HDTNLPVEDNSPVSNYHSSTNYASHCNYSSG
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgagcagccctgatgcgggttacgccagtgacgagcagagccaaggacagtgctcggtg
gccaggatgatgcccgccgtgggtcattgtcagtgggcggcagagtctctgagccccctg
ggagcggggaagcagaagagcgagacgggatccagcaattcagggaaccgcggcaaagcg
gagccccgcatccgccgccccatgaacgccttcatggtctgggctaaggacgagcgcaag
agactggcgcagcaaaaccccgacctgcacaacgccgagctgagcaaaatgttgggtaaa
tcgtggaaatctctgtccttggtagaaaagagaccgtttgttgaagaggctgaaaggctg
agagtccaacacatgcaggaccacccaaactacaagtacaggccaagaagaagaaaacaa
gtgaagagaatcaagcgcgctgaacccggcttcttacacggcatagcggagcagcaaggg
accaggatgagcggtgagggcagaatgtgtctcgaaagcctgggctttcatgagcaggag
tatcgcccagtgcagcacagccagctgctgcccatgaaccagtacagggactgccaggcc
ctggctccacactatgagagtagttacaacttacctactcccgagacttcccctctggac
atggttgagaccgatcccgtgttttttgcatcccattttcaggaaaattgtcagatgatg
ccttacaactaccatcaagttggcgactactcttcccagcaggaaagccataccaacggc
accctgggaaggcatctatccccccctgaccaaattgtgcaggtgaactctctccagagt
gtgatgagctgccaggcctcaccacacatttacttcaaccagttgtgcccaccgggcaat
gcgagaagccaccaagtacagcaagctgggcaaccttctcccccacccgagtcccacccc
atggacaacctcgggcacttgcagcaggctgagctcttgggggatgtagatcacagtgaa
tttgagcagtaccttcattttgtctctagtaaaccagagccaggactggtttttcatggg
catgatacaaatttgccagtggaagataatagtccagtttcaaattaccattcttcaact
aattatgcgtcccactgtaattattcaagtggctga
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