Geotrypetes seraphini (Gaboon caecilian): 117353726
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Entry
117353726 CDS
T09159
Symbol
NPHP3
Name
(RefSeq) nephrocystin-3 isoform X1
KO
K19360
nephrocystin-3
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
gsh03037
]
117353726 (NPHP3)
Cilium and associated proteins [BR:
gsh03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
117353726 (NPHP3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_NPHP3
TPR_12
NPHP3_hel
NPHP3
TPR_10
TPR_1
TPR_7
TPR_8
TPR_2
TPR_MalT
TPR_16
NPHP3_N
TPR_19
NACHT
TPR_11
AAA_16
AAA_22
AAA_14
ATPase_2
Uso1_p115_C
AAA_19
Viral_helicase1
ARM_TT21_4th
T2SSE
14-3-3
IFP_35_N
XRCC4_CC
Motif
Other DBs
NCBI-GeneID:
117353726
NCBI-ProteinID:
XP_033785861
UniProt:
A0A6P8P9K0
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All DBs
Position
2:complement(309657260..309924523)
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AA seq
1308 aa
AA seq
DB search
MGTASSLVNPGEVIEDTYGGGGGEACEIPVEVKPKARLLRSSFRRGPRVIGASFKSTASV
DLEYAAEYERLKKEYEIFRVSKNNEIASMQKKEAKLDKENKRLRAELQALQKTYQKILRE
KESAVEAKYQAMERAASFEHDRDKVKRQFKIFRETKEKEIQDLLRAKRELESRFQRLQAQ
GIPVLDPGESDSDDNCTDVTVPGTQCEYWTGGALRSEPSMGSMMQLQQSFKGPEFAQSSI
DVEGPFANVNRDDWDTAVASLLQVTPLFSPSLWSNTIRCYLMNTCETQSEVDIFLQNYSP
KLQIMCEAMGYFFQTVHFPLEDINHYESVRKWEIEKSSLVILFINVLLPSCLVEDYREAF
FKNIEAKPRLIYHRMKDGEPSSDLVQQLLEWDMNKTNKTKIIDHDGEPEEGAFKTYSHVE
KIIKQDLLGCESTNLETQEFGSDEDPAGPEEEDFGDVLWDVHNEQEQVEAFQQASTSTCE
LGFEKYYGRLNDLAAAPAPSPPLLVSGGPGSGKSLLLSKWIQLQQKHSPNTLILYHFVGR
PKSISSEPALVMKRLTLKLMQHSWSVSALSLDPAKFLEEFPHWLEKLSARHHGNILIIID
SVDQIQQAEKHLKWLIDPLPVNVRVVVSVNVETCPQAWRLWPTLHLDPLSPKDVKSLINA
ECSCSNIKLTKQQERKLEKHCRSAATCNALYVTLLAKIIISGGATGSTDEVLQQCLQCQD
TMSLYKLVLRFVLKTIPSHENKDFMKEILCLISISHNGVSESELLELVPELSCPILASLV
HSLHKMSVLSYGCGLLKFQHLQAWEAVSLEYMQEGETIIYGYRKSLIQYFTKQLNQERVT
WRSADELPWLFQQLGEKQKLHECLLNLFVSQNLYKRGHFAELLSYWQFVGKDKTSMAAEY
FDSLKQYEKSCEGKESMTSIADLYETLGRFLKDLGLLSQAVVPLQRSLEIRETALDPDHP
SVAQSLHQLAGVYVQSKKFGNAEQLYKQALEINENAYGAEHPRVARELDALAMLYQKQNK
YEQAEQLRKRSLKIRQRVARRKGSMYGFALLKQRAQQLEELTLGKDTPDSARTLNELGVL
YYLQNNLETAEMFLKRSLEMRERVLGPDHTDCAQSLNNLAALYNDEKHYDKAEELYEKAL
DIRRRVLAPDHPSLAYTVKHLTVLYKRRGKLDKAAPLYELAVEIRQKSFGPKHPSVATAL
VNLAVLYCQMKRHIEAFPLYERALRIYEDSLGPMHPRVGETLKNTALLSYEEGNFEKAAE
LYKRAMEIKEAEPSLLGGKAPSHHSSSADAFSVKNTSPPNTSLDPGHR
NT seq
3927 nt
NT seq
+upstream
nt +downstream
nt
atggggacagcatcatccctagtgaatcctggggaagttattgaagacacatatggagga
ggtggtggagaagcctgtgagattcctgtggaggtgaaacccaaggcacggctcctacgc
agttcctttagacgaggtcctcgtgttattggagctagcttcaagtctacagcttctgtg
gacctggaatatgccgcagagtatgagcgtctgaaaaaggagtatgagatcttccgggtc
agcaaaaataacgagattgcctcaatgcagaaaaaagaagccaagcttgacaaagaaaac
aaaaggctaagggcagagctgcaggcacttcaaaaaacctatcagaagatacttcgagaa
aaagaaagtgcagtagaagccaaataccaagctatggaaagagctgcctcatttgaacac
gacagagacaaagtcaaaagacagttcaagattttcagggagacgaaggaaaaagagatt
caagacttgctaagagcgaagcgagagttggagtccaggtttcaaaggctacaggcacaa
ggcatcccagtgctggacccaggagaatcggactctgatgacaactgtacagatgtcact
gttccaggcactcagtgtgaatactggactggtggagcgcttagaagtgagccatctatg
ggcagcatgatgcaattacaacagtccttcaaagggcccgaatttgcccaaagctctata
gacgtagaaggaccatttgcaaatgttaacagagatgactgggataccgctgttgccagc
ctgctacaggtcacaccattgttttcaccatctctgtggagtaacacaatacggtgttac
ctgatgaatacttgcgaaacccaatcagaagtggacattttcctccagaattactctcca
aagcttcaaataatgtgtgaggcgatgggttacttctttcagactgttcattttccattg
gaggatataaaccattatgaatctgttcggaaatgggaaattgaaaaaagttccttggtc
attttattcatcaatgtattattgcccagctgtttggtggaggactacagggaagctttc
tttaaaaacattgaagcaaaaccccgactaatttatcacagaatgaaggatggagaaccc
agctcagatcttgtgcagcagctattggaatgggacatgaataaaaccaacaaaactaag
atcatagaccatgatggagaacctgaggaaggagcatttaaaacctacagccatgtggaa
aagatcattaaacaggaccttttgggctgtgaaagtactaatcttgaaacccaggagttt
ggcagtgatgaagatccagcgggtcctgaagaggaagactttggagatgtattatgggat
gtacataatgaacaagagcaggtggaggcttttcagcaggcttccacatcaacatgtgag
ctaggatttgagaaatactatggccgtctgaatgatttggcagcagcacctgcaccaagt
ccacccctacttgtttctggaggtcctggctcaggaaaatccctgcttttatccaaatgg
attcagctgcagcagaagcattctccaaacacactgattctgtatcactttgttggaaga
cctaagtccatcagttcagagccagcactagtcatgaaaagactgactttaaagctaatg
cagcattcgtggtcggtgtcagctttatctttggatcctgccaagtttttggaagaattt
cctcactggctggaaaagctgtcggctcgtcatcatggcaacatcctcatcatcattgac
tctgtagaccaaatacagcaagctgaaaaacacctaaaatggttaattgatcctttgcca
gtaaatgtgagggtggttgtctctgtgaatgtagaaacttgtccacaggcatggaggttg
tggccaactcttcaccttgatccactgagtcctaaggatgtgaagtctctcattaatgca
gaatgtagctgttccaatatcaaactgactaaacagcaggagcgaaagctggagaaacac
tgtcgctctgctgcaacctgcaatgccttatatgtcacattgctggctaaaattatcata
agtggtggagcaacaggaagtactgacgaggttttacagcagtgtttgcaatgccaagat
acaatgtcattatacaagctggtcctgcgctttgttctgaaaactataccaagtcatgaa
aataaggatttcatgaaggagatactttgcctgattagcatcagccataacggagtgagt
gaatcggagctcctggaacttgttcctgaactgtcctgtcccatattagcctccttggtt
cacagcctgcacaagatgagcgtgttgtcatatggttgtgggctgcttaagtttcagcat
cttcaggcttgggaagccgtgagcctggaatacatgcaagaaggagaaacaattatttat
ggatatagaaaatcgttaatacagtatttcactaagcagctgaaccaagaacgtgtaacc
tggaggagtgcagatgaactcccctggctctttcagcagctcggagaaaagcagaagttg
catgaatgcctgctgaacctctttgtatcccagaatctttacaaaagggggcattttgct
gaattactgagctactggcagtttgttggaaaggataaaacctccatggcagcagaatac
tttgactctctaaagcaatatgaaaagagctgtgaaggaaaggagagcatgacctctata
gctgatctgtatgagacactagggcgatttctcaaggatcttggtcttctcagtcaggct
gtggttccattgcaacgatctctagaaattcgagaaacagcacttgacccagatcacccc
agtgtggcacaatctcttcaccagctagcaggagtttatgtgcaatctaagaagtttggc
aatgccgagcagctatataagcaagctctggaaatcaatgaaaatgcttacggtgctgaa
catccaagagttgctcgtgaactggatgcactcgctatgttatatcaaaaacaaaacaaa
tatgagcaagctgaacagctgaggaagagatccttgaaaattcgtcagcgagttgcccgt
cggaaagggagcatgtatgggtttgctctgctgaaacaacgtgcccaacagctggaagaa
ctcaccctgggaaaagacacacctgacagtgctcggaccctaaatgagctgggagtcctc
tattacctacagaacaatcttgagactgcagaaatgttcctgaagcgatccctggaaatg
agggagcgagttctaggaccagatcacactgattgtgcccagtccttgaacaaccttgca
gcactgtacaatgatgaaaagcactatgataaagctgaggaactgtatgaaaaggctctt
gatatcaggaggagagtgctggcccctgatcacccatctctggcttacactgtgaaacac
ctcactgtcctctacaaacgtagaggaaagttggataaggctgcacctttgtatgagctg
gctgttgagattcgacaaaaatcgtttggccctaagcatcctagtgtagctactgcttta
gtaaacttggcagtgctttactgtcagatgaaaaggcatattgaagcttttcccttgtat
gagcgtgcattaaggatttatgaagatagcctgggtcccatgcatcctcgagtgggtgaa
acactgaaaaatacggcactgctgagctatgaagaaggaaattttgaaaaggcagcagaa
ctatacaagagagccatggaaattaaagaagccgaaccttctctgctaggggggaaagct
ccttcgcaccactcatcaagcgcagacgcattcagtgtaaagaacacttctcctccaaat
acctctttggacccaggccataggtga
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integrated database retrieval system
