Geotrypetes seraphini (Gaboon caecilian): 117353775
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Entry
117353775 CDS
T09159
Symbol
CNOT10
Name
(RefSeq) LOW QUALITY PROTEIN: CCR4-NOT transcription complex subunit 10
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117353775 (CNOT10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsh03019
]
117353775 (CNOT10)
Messenger RNA biogenesis [BR:
gsh03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
117353775 (CNOT10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_8
TPR_14
TPR_12
TPR_19
ARM_TT21_N
ARM_TT21
ANAPC3
TPR_7
TPR_10
TPR_MalT
DUF6058
Motif
Other DBs
NCBI-GeneID:
117353775
NCBI-ProteinID:
XP_033785990
UniProt:
A0A6P8PV22
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All DBs
Position
2:complement(318463876..318650116)
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AA seq
747 aa
AA seq
DB search
MYDHTMAADKAADQGSEKHEGSAGSGISDQEKELSSSALQAFMAGNYEACLQHLGGLQEI
NKEDNKIALNTAVAEFYKXDQSITDSLRQTLNQLKNQIYAAVEEMDSLDDVENSMLYYNQ
AVILYHLRQYTEVISIGEKLYQFIEPFEERFAQAVCFLLVDVYLLTYQAEKALHLLAVLE
KMILQGNSNKNGKNETANNTNKDALNQKPEGGTHTEVAKSKIHQYKVRAYIQMKSLKACK
REIKSVMNTTGNSASSLFLKSNFEYLRGNYRKAVKLLNSSNIAEHPGFMKTGECIRCMFW
NNLGCIHFAMGKHNLGIFYFKKALQENDNACAQLSLSTTDPGKKFSGRPMCTLLTNKRYE
LLHNCGIQLLHVGRPLAAFECLIEAVQVYHSNPRLWLRLAECCIAANKGTSEQETKGLPS
KKGIVQSNVGQGYHRKIVLASQSIQNIVYNDGQSSAIPVASTEFAAICLRNALLLLPEDQ
QQLKQENGSKTSSQLGGAENNSEIGEGCSKSHEGDKFSSAPPSSPLRKQELDNLRCSILA
CSAYVSLALGDNLMALNHAEKLLQQPKLSGSLKFLGHLYAAEALISLDRISDAITHLNPE
NITDVSLGISSSDQDQGSDRGENEPMESTGKQTPQCYPNSVTSARTMMLFNLGSAYCLRS
EYDKARKCLQQAASMIYPKEIPPEAILLAVYLELQNGNTQLALQIIKRNQLLPSVKSLSD
IRKKPVFQPVHSMQPIQMPAFTTIQRK
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgtatgatcacactatggctgcagataaggctgcagatcagggatctgaaaaacatgaa
ggatctgctggctctggaattagtgatcaggaaaaagagttatccagcagtgcactacaa
gctttcatggctggcaactatgaagcttgtctgcaacatcttggaggtctgcaagaaata
aacaaagaggacaacaaaatagctttgaatacagctgtggctgagttttacaaangtgat
cagagcataacagacagcctaaggcaaacgctcaaccagttgaagaatcagatttatgct
gctgttgaagaaatggatagtttagatgatgttgaaaacagcatgttatattataatcaa
gctgttatcctctatcatttgcggcagtacaccgaagtcatatcaatcggagagaaactg
tatcagttcatagaaccttttgaagagaggtttgcccaggcggtatgtttcctacttgta
gatgtttatcttctaacttaccaagctgagaaagctttgcatctgcttgctgtcctagag
aaaatgattttgcaaggcaacagtaacaaaaatgggaaaaatgagactgctaataatacc
aataaagatgcgttaaaccagaagccagaaggtggaactcatacagaagttgcaaaatct
aagatacatcagtataaagtgagagcctatattcagatgaagtctctaaaagcctgcaaa
agagagatcaagtctgttatgaacacaactggaaattctgcttcttctctctttctgaag
agtaattttgaatacttaagaggcaattaccgaaaagcagtaaaacttttaaacagctca
aatatagctgaacatccagggttcatgaaaacaggtgaatgcataaggtgtatgttttgg
aacaatcttggctgtatccattttgccatgggaaagcataacttgggaattttctacttc
aaaaaagctctccaagaaaatgataatgcatgtgcacagctatctctttctacaacagac
ccaggtaagaaattctcaggtagacctatgtgcacactactgactaataaacgatatgag
ctgcttcacaattgtggcattcagctacttcatgttgggagacctttagcagcttttgaa
tgtttgatagaagctgtccaggtttatcactcaaacccacgcctttggctgagactggca
gagtgttgcattgctgccaacaaggggacttcagaacaagaaactaaaggacttccaagc
aaaaaaggaattgttcagtccaatgtaggccagggttaccatcgtaaaatagtcctggca
tcccagtccattcaaaatattgtctacaatgatggtcagtcttcagctatccctgtagct
agcacggagtttgcagctatttgtttacgaaatgctttgctgctgttgcctgaggatcaa
caacaattaaagcaagagaatggttcaaaaaccagtagccagctaggaggtgctgaaaac
aatagtgaaatcggtgaaggatgcagtaaaagtcatgaaggagataaattcagctctgct
ccaccttcttctcctttgagaaaacaggagctggacaatttgagatgttcaatacttgct
tgcagtgcttatgtctctttggctttgggtgacaacctaatggctttgaatcatgcagag
aaacttcttcagcagccaaaattgtcaggatctcttaaatttttgggtcatttgtatgca
gcagaggcactcatatctctggacagaatctctgatgccattactcatctgaaccctgag
aacatcacagatgtctccctagggatctcttccagtgaccaagatcaaggatctgacaga
ggggaaaatgagccaatggaatcaacgggaaaacagacaccacagtgttacccaaactca
gttacatctgcacgaacaatgatgctgtttaacctcggcagtgcatactgtcttcgaagt
gaatatgacaaagcacgcaaatgtctgcaacaggctgcttcgatgatttatcccaaggaa
attccacctgaagcaattctacttgctgtctatcttgaactgcaaaatggcaatactcaa
ttggctttgcagatcatcaaaagaaatcagcttctcccttctgtgaagtctctgtctgac
attcgaaagaaaccagtatttcaacctgttcactctatgcagcccattcagatgccagct
ttcactaccattcagaggaaatag
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