Geotrypetes seraphini (Gaboon caecilian): 117354083
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Entry
117354083 CDS
T09159
Name
(RefSeq) ATP-dependent translocase ABCB1-like
KO
K05660
ATP-binding cassette, subfamily B (MDR/TAP), member 5
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
117354083
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gsh02000
]
117354083
Transporters [BR:
gsh02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
117354083
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
RsgA_GTPase
Rad17
AAA_5
AAA_30
AAA_28
AAA_16
Zeta_toxin
Mg_chelatase
AAA_7
PRK
AAA_29
AAA_15
tRNA_lig_kinase
DUF996
CDC45
Motif
Other DBs
NCBI-GeneID:
117354083
NCBI-ProteinID:
XP_033786803
UniProt:
A0A6P8PCU3
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All DBs
Position
2:complement(398892496..399054056)
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AA seq
1316 aa
AA seq
DB search
MKDDFTNYPGQDQVGVEFPANGYNNLAFTTDEKPSQNDMPKKNKKKKEKVNKEKAKLVGM
LQLFAYADCLDKVLMTVGLICAVANGVALPLMIIVFGEMTDSFVQSGVQEYNSSANMSSE
CVGIPHMDIEGQMTRFAYYFVGIGFAVLVLSTIQVWTFLLAATRQTQRIRHNFFYAVLHQ
EMTWFDTNQIGTLNTRLTDDINTIHDGLGDKICIFIQFFSTFVAGIVIGFIYGWKLTLVI
MSVSPLLALSAAVWSKLLATLTTAELTSYSKAGAVAEEVLTAIRTVVAFNGQQKAIAKYN
VSLEEAKAVGVKKSLTTNISMGLTQFLIFGAYALGLWYGTKLTVEEPQNYTIGSVLIVFF
SVLIGTFSIGQAAPNLEGIANARGAAYEVYRIIQKHRPIDSGCKDGHKPDKLTGQIEFKN
IFFSYPSRPDITILQGLNLKVETGKTIALVGSSGCGKSTTIQLLQRFYDPMEGQVMLDGQ
DIRSLNVKWLREHIGVVSQEPVLFATTIAENIRYGREDVTDAEIEQASKEANAFDFISKL
PDRFNTMVGERGAQLSGGQKQRIAIARALVRNPKILLLDEATSALDTQSESIVQAALDKA
RTGRTTIVIAHRLSTIKTADVIAGFRNGVIVELGTHSELMAQKGVYYSLVMQQNNASSNE
YEETDEYTDHTEDEDQLDFEIIPDLPETEGIERTSIHRQSSRQKRRKSTMKKRRVKKTKK
SKSDEKEDIEELPEVGLTRILALNKPEWPYIIFGVIAAAIAGGIYPTFAVIFGKVIGSFQ
ETDGDKRSQNTNLLSLMFLVLGIISILVYIIMGYTFGKSGENLTMRLRSSSFKALLQQEI
GWFDDHKNAVGVLLTRLATDASQVKGATGTRMGLIIMTICTLLAAIIIAFIYSWQLTLMI
LACVPFLTGANFIRMKSMAGHASKDQKALEEAGRISTEAVENIRTVVSLTREDTFYVKYT
TSLDGPYRDAMIKAPLYGFTYGISQSCNYFVNAAVFRFGAWLIAHCYTGFENVFIVFSAI
VFAAMSVGQSTSLAPDFGKAKVSAQRIFKLLSRKPLIDSYSEEGQKLNTFNGNIEFRNIQ
FVYPTRPEVQVLQGLSIGVNKGQTLALVGSSGCGKSTSIQLLERFYDPMEGHVVADGVDT
KALNLQWLRSQLGIVSQEPILFDCSITENIQYGDNSRIVSKEEVEQAARAANIHTFIVNL
PDGYSTRVGDKGTQLSGGQKQRIAIARALVRKPKVLLLDEATSALDTESEKIVQQALDNA
RQGRTCIVIAHRLSTVQNADIIAVIQNGRVVEQGTHNQLLARQGAYYALVNAQVSH
NT seq
3951 nt
NT seq
+upstream
nt +downstream
nt
atgaaggatgatttcacaaattaccccggacaggaccaggtcggcgttgaatttccagct
aatggatacaacaatctggccttcacaacagatgaaaaaccatcacaaaatgacatgccc
aagaaaaacaagaaaaagaaagaaaaagtaaataaagagaaagcaaagctggttggaatg
ctccagctgtttgcttatgctgattgtttggataaagttttaatgactgtgggcttgatc
tgtgcagtagctaatggtgttgcacttccacttatgatcattgtttttggtgaaatgact
gacagctttgttcaaagtggtgtacaagaatataattcatcagccaacatgtcgtctgaa
tgtgtcggaattccacatatggacatagaaggtcaaatgacaaggtttgcatactacttt
gttggaattggttttgccgtattggtattaagtacaatacaagtctggacgtttctgctc
gctgctacaagacaaacgcaaagaattcgccacaactttttttatgcagtcctccaccag
gagatgacctggtttgacacaaaccagattggaactctgaacaccagattgacagatgac
attaatactatacatgatggtcttggagacaagatttgtatatttatacaatttttttca
accttcgtggctggcattgtcattggatttatatatggttggaaactgactttggtgatc
atgtctgtcagtcctcttcttgctctatcggcagcagtttggtcaaaacttctagccacc
ctgactactgcagagctgacttcttattctaaagcaggagctgtagcagaagaggtcctg
acagcaataaggacagtggtcgcatttaatgggcaacagaaagcaattgcaaagtacaat
gttagcctagaagaagctaaagctgtaggtgtgaaaaaatcgctcacgaccaacatatcg
atgggtctgactcagtttcttatatttggagcatatgccctgggtctgtggtatggtaca
aagctcactgtggaggaaccccaaaactatacaattggcagtgttttaattgtattcttc
tcagttcttattggtacattctctattggtcaagctgctcccaacttagaaggtattgct
aatgctcgtggtgctgcctatgaagtgtacagaattatccaaaagcatcgtcccatagat
agtggttgcaaagatggacacaaaccggacaagctgacaggacaaattgaattcaagaac
atatttttctcatacccatctagacctgatattacaatactccaaggtctgaacttaaag
gttgaaactgggaagaccattgctctcgttgggtccagtggctgtgggaaaagtactaca
atccaacttttacagaggttttatgatcccatggagggacaggtgatgctagacggacag
gatattcgatccctcaatgtgaagtggctgagagaacacatcggggtggtgagtcaagag
cccgtattgtttgctacaacaatagcagagaacattcgctatggcagagaagatgttact
gatgctgaaatcgaacaagcctctaaagaagccaatgcttttgatttcatatcaaagcta
ccagatagattcaatactatggtgggcgagagaggagctcagctgagtggaggtcagaaa
cagagaatagcaattgctcgtgccctggtgaggaacccaaagattctgttactggatgaa
gcgacgtctgctctggatactcagagtgaatccatagtgcaagcagctcttgataaggca
aggactgggcgtacaacaattgtgattgctcaccgcctctctacaatcaagacggccgat
gtgattgctggatttaggaatggtgttattgttgagttgggaacacacagtgagctcatg
gcacagaaaggagtctattattctcttgtaatgcagcagaataatgcaagtagcaatgaa
tatgaagaaactgatgaatatactgatcatacagaagacgaagaccagctcgacttcgag
atcattcctgatctcccagaaacggaaggtattgaaagaacaagtattcataggcaatca
agtagacagaaacgcagaaaatcaactatgaagaagagaagagtcaagaaaacaaagaaa
tccaaatcggatgaaaaagaggacatcgaagaacttcctgaagtgggccttaccagaatt
ctggctctgaataaaccggaatggccctatattatatttggggtcattgctgctgcaata
gcaggtggcatttatcctacgtttgctgtcatatttgggaaagtgattgggtcttttcaa
gaaactgatggtgacaaaagaagccagaatacaaatttgctttctctaatgtttttggta
ctgggaattattagtatcctagtatatataatcatgggatatacttttggcaagtctgga
gagaatcttactatgaggctgcgatcttcatcattcaaggcattgcttcaacaggaaatt
ggatggtttgatgatcacaagaatgctgtaggcgttttgcttacaagactcgccacagat
gcttcccaagtcaagggggctactgggactcgaatgggtttgattatcatgactatctgc
accttactggcagccattattattgcctttatatatagctggcagctgacgctgatgatc
cttgcctgtgttccatttctgactggggcaaattttattagaatgaaatcaatggctggt
catgcttctaaagatcaaaaagccttggaggaagctggaagaatctccactgaagctgta
gaaaatataagaacggtagtttctttaacaagagaagatacattttatgtaaaatatacc
acaagtttagatggaccttacagggatgccatgatcaaagctccattatatggattcacc
tacggaatatcacagtcttgcaactattttgttaatgcggctgttttcagatttggagct
tggcttattgcacactgttacacaggatttgaaaatgtgtttattgtattctctgctatc
gtgttcgcagctatgagtgttggacagtccacttctctggcaccagactttggaaaagca
aaagtttcagctcaacgaatttttaagcttctaagtaggaagccactaattgatagctat
agtgaagaaggtcaaaaactgaataccttcaatggaaatattgaattcagaaacatccag
tttgtgtatcccacaagaccagaagttcaggttttacaggggctcagtatcggtgttaat
aaaggacagacacttgcacttgttggaagcagtggatgtgggaagagtacctcgattcag
ttgttggagagattctacgatcctatggaaggacacgtggttgcagatggagtggacacc
aaggctttgaatttacaatggctcagatcgcagctgggtattgtgtcccaagagccgatt
ctgtttgactgcagcattactgaaaatattcagtacggagacaatagcagaattgtatcc
aaagaagaggttgaacaagcagctagagcagcaaatatccatactttcatagtgaaccta
cctgatggatacagcacacgtgtaggtgataaaggaacacagctctcaggaggtcagaag
caaagaatagcaattgcgcgagctctcgttcgaaaaccgaaagtcctgctactagatgaa
gccacgtctgctcttgatacagaaagtgaaaagatagtccagcaggctctggacaatgcc
agacaaggtcgaacctgtatcgttattgcacatcgtttgtcaactgtacagaatgcggac
ataatagcagtgattcagaatggaagagtggtggaacaagggactcacaatcaacttctt
gctagacaaggggcatattatgctcttgtaaatgcacaagtttcgcattag
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integrated database retrieval system
