Geotrypetes seraphini (Gaboon caecilian): 117354092
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Entry
117354092 CDS
T09159
Symbol
SNX13
Name
(RefSeq) sorting nexin-13 isoform X1
KO
K17925
sorting nexin-13
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
gsh04990
]
117354092 (SNX13)
Domain-containing proteins not elsewhere classified [BR:
gsh04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
117354092 (SNX13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
RGS
Rep3_C
Motif
Other DBs
NCBI-GeneID:
117354092
NCBI-ProteinID:
XP_033786837
UniProt:
A0A6P8PD11
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Position
2:402182068..402490251
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AA seq
961 aa
AA seq
DB search
MMLAEASLSIWGWGSLCVVLFLITFGPFAIFYFAFYILCFVVGGFAITLLFGKTNSEKYL
EKWEHSFLPSPSTGVLKCLEEMKEEARPIRIDRRLTGSNMIDEPLQQVIQFSLRDYIQYW
YYTLSDDESFLLEIRQTIQNALIQLSTRSKEVDWQPYFTTRLVDDFATHLRVFRKAQQRT
IEKEDQKQKKDAVEDFVDIFFEVEIEMEKEICRDLVCSSSKDEEGFLKDLCEVLLYLLLP
PGDFQNKIMRYFVGEILARGVLLPLINQLSDPDYINQYIIWMIHDSNYNYEAFMNIIKLS
DNVGELEAVRDKAAEELLYLRSLDTAGDDINAIKNQINSLLFVKKVCETRIQRLQSGKEI
DTVKLAANFGKLYTVPLDNILVDNVALQFFIDYMQQSGGQAHLFFWLTVEGYRVTAQQQL
EVLLNRRRDGERQTNQTKDLLRTAAFGVYEQYLSEKASPRVVIDDYLLAKLEYLLNSEDP
TPEIFDEAQRKVYDLMLRDERFYPSFKHSPFYIRMLAELDMLKDPSFRGSDDGDGESFNG
SPTGSINLSLDDLSNVNSDEMVQLQAYISDTGVCNDHGKTYALYAITVHRRNLDGIEDIW
KTYRRYSDFHDFHMRITEQFENLANLLKLPGKKTFNNMDKDFLEKRKKDLNTYLQLLLTP
ETMKAWPALANCAHDFLENKAYNKGKGDFARKMDTFVNPLRNSMRNVSNAVKSFPDSLAE
GVTKMSDNMGRMSERLGQDIKHSFTKVPPLLPKPDADPEHCRVSAQLDDNVDDNIPLRVM
LLLMDEVFDLKERNQWLRRNIKNLLQQLIRATYGDTINRKIVDHVDWMTSPEQVADFVKR
FRDAFWPNGILAETAPRRERAIRMRTRVAAKTKLLEIMPDELKHIIGAETTRKGILRVFE
MFQHNQLNKRLVYVFLEGFLETLFPQYKFHELFNKLHSRSERMKKYKERLQSSQTPSLQK
R
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atgatgttagcagaggccagtctttccatatggggatggggaagcctttgtgttgtgctc
tttctgataacctttgggccattcgctatattttactttgcgttttatattctctgcttt
gtggttggaggttttgccattactctcttgtttggaaaaacaaattcagaaaaatatctt
gaaaaatgggagcactcttttcttccatcaccatctactggagttcttaagtgtttagag
gaaatgaaagaagaagctaggccaataaggatcgacagaaggttgacaggctccaatatg
attgatgaacctcttcagcaagtaatccagttttccctgagagactatatccagtattgg
tattacacactaagtgatgatgaatcttttctccttgaaattaggcaaactattcaaaat
gcacttattcagctttctactaggtcaaaagaagtggattggcaaccatattttacaaca
cgtctagtggatgattttgcaacacatcttcgagtatttaggaaagctcaacaaaggaca
atagaaaaagaagatcaaaagcaaaagaaagatgcagtggaagattttgtagatattttt
tttgaggtggaaattgaaatggagaaggaaatctgtcgtgacttggtgtgctcttcatcc
aaagatgaggaaggattcctgaaggatctttgtgaggttctactgtatttattgctacct
cctggagacttccagaacaagatcatgcgatattttgttggggaaatccttgcacgagga
gttcttcttcctttaataaaccaactcagtgatcctgattatattaatcaatatatcatt
tggatgattcatgattccaattacaactatgaggccttcatgaacattattaaattaagt
gacaatgtaggagagttggaagctgtaagggataaggcagcagaagaacttctgtatctt
cgttccttagacacagcaggtgatgacatcaacgctataaaaaatcaaataaacagctta
ttatttgtaaagaaagtatgtgaaacaagaatacagagattgcagtcaggaaaagaaata
gatactgtgaagctggcagcaaactttggaaaactttacacagtccctctggacaacatt
cttgtagataatgtagcactacagttttttattgattatatgcagcagagtggaggccaa
gcacatctcttcttctggttgacggtagagggatatcgtgttacagcgcagcaacagtta
gaggtgctactaaatcgacggagagatggagaacgtcagactaatcagaccaaagactta
ttaagaacagctgcatttggagtttatgaacagtatttgtctgaaaaggcatctccaaga
gttgtcattgatgattatctgttagcaaaactggaatacttgttgaacagcgaggatcca
acacctgagatctttgatgaagcacaaagaaaggtatatgatttgatgctgcgagatgaa
agattctacccatcattcaaacacagtccattttatatccgtatgcttgctgaacttgac
atgttgaaggacccaagctttagaggatcagatgatggagatggagaatcttttaatggc
tctcctacaggcagcataaatttgtctttagatgacctttcaaatgtcaactctgatgaa
atggtgcaactgcaagcgtacatttcagacactggggtatgtaatgatcatggcaagacc
tatgcattatatgcgatcactgtacatcgtcgaaacttagatggcattgaagacatttgg
aaaacatatcgtcgctacagtgacttccatgacttccacatgaggatcactgaacagttt
gaaaaccttgcaaatttattgaagctccctgggaaaaagacatttaacaatatggataaa
gactttttagaaaagaggaaaaaagatttaaatacatatttgcagttattgctgactcca
gagaccatgaaagcgtggccagctttggctaactgtgcacatgacttcctggagaataaa
gcctacaataaaggaaagggtgattttgccagaaagatggatacatttgtgaacccacta
cgcaactccatgaggaatgtttcaaatgcagttaaatcatttccagacagcctggctgag
ggagtgactaaaatgtctgacaacatggggagaatgtcagaaagattaggacaagatata
aaacattcatttaccaaggttccacctttgctaccaaaacctgatgcagaccctgaacac
tgccgtgtctcagcacagttggatgacaatgtggatgacaatattcctctcagagtaatg
ctgctgcttatggatgaagtctttgatttaaaggagagaaatcaatggctacgaagaaat
atcaaaaacttactccagcagcttattagggcaacatatggtgacacaattaatagaaaa
attgttgaccatgtagattggatgacatcacctgagcaagtggcagattttgtgaaacgt
tttagagatgcattttggcctaatggtattttagcagagactgctccacggagagagaga
gctattagaatgagaacaagagtagcagcaaaaacaaaattgcttgaaataatgcctgat
gaactgaagcatatcattggagctgaaacaacacgaaaaggcattctccgggtctttgaa
atgtttcagcacaatcaattaaataagagactagtgtatgtttttttagagggcttcctg
gaaaccttatttccacagtacaaatttcatgagcttttcaataaattgcactctagatca
gagcgaatgaagaaatacaaagaaagactgcaatcttctcaaacaccttctttgcagaaa
aggtga
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