Geotrypetes seraphini (Gaboon caecilian): 117354135
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Entry
117354135 CDS
T09159
Symbol
DYNC1I1
Name
(RefSeq) cytoplasmic dynein 1 intermediate chain 1 isoform X1
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04145
Phagosome
gsh04814
Motor proteins
gsh05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
117354135 (DYNC1I1)
09142 Cell motility
04814 Motor proteins
117354135 (DYNC1I1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
117354135 (DYNC1I1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gsh03036
]
117354135 (DYNC1I1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
gsh04812
]
117354135 (DYNC1I1)
Chromosome and associated proteins [BR:
gsh03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
117354135 (DYNC1I1)
Cytoskeleton proteins [BR:
gsh04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
117354135 (DYNC1I1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
WDR55
Dynein_IC2
WD40
WD40_CDC20-Fz
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_EML
WD40_Prp19
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML_2
Beta-prop_RIG_2nd
WD40_WDHD1_1st
Beta-prop_WDR19_1st
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR3_2nd
Beta-prop_TEP1_C
Beta-prop_HPS5
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
WD40_RFWD3
Motif
Other DBs
NCBI-GeneID:
117354135
NCBI-ProteinID:
XP_033786976
UniProt:
A0A6P8QJS1
LinkDB
All DBs
Position
2:complement(416123765..416710789)
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AA seq
636 aa
AA seq
DB search
MSDKSDLKAELERKKQRLAQIREEKKRKEEERKKKEVELQQNKDLTQEDSDLDRKRRETE
ALLQSIGISPEPPLVPTPMSPSSKSASTPSEAGSQDSGDCGPLGRNIQTGLFGTLQWDTD
PSVLQLHSDSELGRRMHKLGVSKITQVDFLPREVVTYSKETQTPVTSHQSEDDEEDEELV
EPKIRHESELENEEHKQEVKEAPPRELTEEEKQQVVHSEEFLIFFDRTIRVIERALAEDS
NIFFDYSGRDLEDKDGDVQAGANLSFNRQFYDEHWSKHRVVTCLDWSLQYPELMVASYNN
NEDAPHEPDGVALVWNMKFKKTTPEYVFHCQSSVMSVCFARFHPNLVVGGMYSGQIVLWD
NRSHRRTPVQRTPLSAAAHTHPVYCVNVVGTQNAHNLITVSTDGKMCSWSLDMLSTPQES
MELQYNKSKPVAVTGMAFPTGDVNNFVVGSEEGTVYAACRHGSKAGIGEVFEGHQGPVTG
INCHMAVGPVDFSHLFLTSSFDWTVKLWTTKHNKPLYSFEDNADYVYDVMWSPVHPALFA
CVDGMGRLDLWNLNNDTEVPTASVTVEGTAALNRVRWAHGGREVAVGDSEGRIWIYDVGE
FAVPHNDEWSRFARTLVEIRANRADGEEEGTVELSA
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacaagagtgatctgaaagctgaactggagcgcaaaaagcagcgcctggctcaa
ataagagaggagaagaaaaggaaggaagaggaaaggaaaaagaaagaagtggaacttcag
caaaacaaagaccttacccaagaggactctgatctagatcgcaagcgaagggagacggag
gcattactgcagagtattggtatatcaccagaaccgcctttagtcccaacccctatgtct
ccctcctcgaaatcagcgagcactccgagtgaagctggcagccaggactcaggagactgt
ggaccgctgggaaggaacattcagactggcctctttgggactctgcagtgggatactgac
ccttcagtgctacagcttcactctgactcagaacttggacgcagaatgcataaacttgga
gtgtcaaaaattacccaagttgatttcttaccccgagaagtggtgacttactccaaggaa
acccagactcctgtgacatctcatcagtctgaagatgatgaagaagatgaggaattagtg
gaacccaaaatccgacatgagtcagagctggaaaatgaagaacataaacaagaagtgaaa
gaagctcctcccagggaactcacagaggaagagaagcaacaagttgtccattctgaagag
ttccttatcttctttgaccggaccattcgtgtcatcgagcgagctttggctgaagactca
aacattttctttgactacagtggtagggacctagaggataaagatggagatgttcaggct
ggagccaacctttcctttaaccgtcaattctatgatgagcactggtcgaagcatcgtgtt
gtcacctgtctggactggtctctccagtaccccgagctgatggtcgcctcatacaacaat
aatgaagatgctccccatgaacctgacggggtagccttagtttggaatatgaaatttaag
aaaaccactccagaatatgtatttcactgtcagtcatctgtgatgtctgtgtgctttgcc
agatttcatccaaacttggttgtcggagggatgtattctggtcagatcgtcctgtgggat
aaccgtagtcataggcggactccagttcagcggactcccctctctgctgctgctcatact
catccagtgtattgtgtaaatgttgtcggaacacagaatgcccacaatctcatcactgtc
tccacggatggcaagatgtgctcttggagtctagatatgctctcaacaccacaggagagc
atggagcttcagtacaataaatcgaagcctgtagcagtcaccggaatggctttcccaaca
ggagacgtcaataactttgtagttggcagtgaggaggggacagtttatgctgcctgtcga
catggaagcaaagctggtatcggtgaggtctttgaagggcaccaaggtcctgtcacagga
atcaattgccacatggcagtgggcccagttgatttttcacacctgttccttacatcatca
tttgactggacagtcaagttatggaccacaaagcacaacaagccgctctactcctttgaa
gacaatgcagactatgtgtacgacgtcatgtggtcaccggtgcatcccgcactctttgcc
tgcgtggacgggatggggcgcttggatctctggaacctgaacaacgacaccgaggttcca
acggcaagtgtgactgtcgagggaacagcagcgcttaaccgagtgcgctgggctcatggt
ggtagagaagtggcagttggagactcggaaggccgcatatggatctatgatgttggcgag
tttgctgttccccataatgacgaatggagccgttttgctcggactttggtggagatccgt
gctaacagggcagatggtgaggaagagggcacagtagaactatcagcttaa
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