Geotrypetes seraphini (Gaboon caecilian): 117354155
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Entry
117354155 CDS
T09159
Symbol
VPS50
Name
(RefSeq) LOW QUALITY PROTEIN: syndetin
KO
K23288
syndetin
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gsh04131
]
117354155 (VPS50)
Membrane trafficking [BR:
gsh04131
]
Protein recycling
Others
EARP complex
117354155 (VPS50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
117354155
NCBI-ProteinID:
XP_033787022
UniProt:
A0A6P8PDQ2
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All DBs
Position
2:complement(419764461..420102120)
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AA seq
994 aa
AA seq
DB search
MTPEEGGAPEKEGYGIVDGQLLVCSPYERTIFRGRMQKIKSFMNPQGPKSPQENVHDLSP
IENFRIPSKEELRELREQPTDPQAEQEIINSIDEIYFSNDSFDVVKYELEKLPPVLSLQE
LEQYRDRLKQQQAAVSKKVADLILEKQPSYVKELDRVTSLQTSLQLAAVICTNGRRHLNI
AKEGFTQASLGLLANQRKRQLLIGLLKSLRTIKTLQRTDVRLSEMLEEEDYPGAIQLCLE
CQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVAISKICTQFXCRHYTKVPASIPTIGQ
TQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNTDTKFQKLQYKDLCMHITSDSYIPCL
ADLCKALWEVMLSYYRTMEWHEKYDSDEISPGSDCSGTVRSEETFDRSYVKKKLEHGLTR
IWQDVQLKVKTYFLGTDMSSFKYDDFIFVLDIISRLMQVGEEFCGSKSEVLQESIRKQSV
NYFKNYHRTRLEELRMFLENETWELCPVKSNFIILQLHEFKFLGQSQSPSVSPSKHPSSA
TTSLFEQYCNGGNPFEIQADKDDETEDVLAANGYESDELEKSAYQEYDSDSDVPEELKRD
YVDEQTGDAPVKSVSRETLRSRKRSDYSLNKVNAPILTNTTLNVIRLVGKYMQMMTILKP
IAFDVIHCMSQLFDYYLYAVYTFFGRNDMYESSGLGLSSSRLRTTLNRIQESLIDMEVST
DGSGTLTASEERKEQVPSPHLSHLVDLTASETLFGLAERVVATESLVFLAEQFEFLQTHL
DAVMPAAKKPFLQQFYSQTVSTASELRKPIYWIVAAKAIDYEQMLLLMANVKWDVKEIMS
QHNMYIDALLKEFEQFNIRLIEVSKQVRIPLPVSNTLWEHCIRLANRTIVEGYANVKKCS
NEGRALMQLDFQQFLLKLEKLTDLRPIPDKEFVETYIKAYYLTENDMERWIKEHREYSTK
QLTNLVNVCLGSHINKKARQKLLAAIDDLDRPRR
NT seq
2985 nt
NT seq
+upstream
nt +downstream
nt
atgacgccagaggaaggcggggcaccggagaaggaaggatatgggattgttgatgggcaa
cttctggtttgttccccttatgaaagaacgatatttcgaggaaggatgcagaagatcaag
tcctttatgaacccccagggccctaaaagtcctcaggagaatgtgcatgatctaagcccc
attgagaattttcggatccctagcaaggaggagctgcgagaacttcgagagcagcctact
gatcctcaggcagaacaagaaatcattaacagcattgatgaaatatatttttccaatgac
tcctttgatgtggtcaagtacgaactggagaagctcccgcctgttcttagtcttcaagaa
ctggaacagtatagagacagactaaagcaacaacaagctgctgtatccaaaaaagttgca
gacttaatccttgaaaagcaaccttcatatgtaaaggaacttgaccgagttacatcatta
cagacaagccttcaactagctgctgtcatttgcacaaatggaagaaggcacttgaatatt
gcaaaagaaggttttactcaagctagtctgggtcttcttgcaaatcaaaggaaacggcag
ttgcttattggattgctgaagtctctgagaacaattaaaacactacaaagaactgatgtg
cgcttaagtgaaatgttagaggaagaggattatcctggggctattcaactctgtctggaa
tgtcagaaggcagccagcacttttaaacactacagctgtataagtgaattgaactcaaag
ctgcaagacactttggaacaaatagaggaacaactagatgtagccatttcaaaaatctgc
acgcaattttgatgtcgtcattatactaaagtcccagcaagcataccgactattgggcaa
acgcagactgctatggatcaactgcatatgcacttcacacaggccattcataatacagtg
tttcaagtagtgcttgggtatgtggagctgtgtgcaggaaacacagataccaagtttcag
aagttacagtacaaggatctctgcatgcatattacttctgacagttacattccatgtctt
gctgacctctgcaaagctctctgggaagtcatgcttagttattatagaactatggaatgg
catgaaaaatatgacagtgatgaaatatctccaggttctgattgcagtggcacagtgaga
agcgaagaaacgtttgatcgtagttatgtgaaaaagaaattagaacatgggctaacacga
atttggcaggatgttcagctgaaagtgaaaacatattttcttggcacagacatgtctagc
ttcaaatatgatgacttcatctttgtactggatataatcagcaggctgatgcaagttggc
gaagagttttgtggaagcaaatctgaagttttacaagaatcaataagaaagcaaagtgtt
aactatttcaaaaactatcaccgaacacgtcttgaagaattgagaatgtttttagagaat
gaaacctgggaactttgcccggtgaagtcaaatttcatcattttacagctgcatgagttt
aaattcctgggacaatcacagtctccatcggtgtcacctagcaagcatccttcctcagca
acaacctccttgtttgaacaatattgtaacggaggaaacccttttgagattcaagctgat
aaagatgatgaaacagaagatgtacttgctgctaatgggtatgaatctgatgagttggaa
aagagtgcatatcaggagtatgacagtgacagcgatgttcctgaagaactcaaaagagat
tacgtggatgagcaaacgggagatgccccagtaaaaagtgtttctcgagaaacactgagg
agcaggaagagatcagattatagcctgaacaaggtgaacgcaccaatcttaaccaatact
acactgaatgtgataagacttgttggaaaatacatgcaaatgatgaccattctgaaacca
attgcatttgatgtaattcactgcatgtcccagctctttgattattatttatatgccgtt
tatacattctttggtcgaaacgatatgtatgaatccagtggattgggtctgagcagcagc
agattgcgaaccacccttaaccgaatacaggagagcctcattgatatggaagtatctact
gatggctcaggcacccttacagcatctgaagagagaaaagaacaagttccaagcccacat
ctcagtcatctagtcgatttgacagcaagtgagacattgtttggccttgctgaaagagtg
gtagctacagaatccttggtgtttttggctgaacagtttgaattcctccagacacatctt
gatgctgtgatgccagcagccaagaaacctttcctccagcagttctactctcagactgtg
tcaactgccagtgaactccgtaaaccaatttactggattgtagcagcaaaagccattgat
tatgagcagatgcttctgcttatggcgaatgttaaatgggatgtaaaggaaatcatgtca
cagcacaacatgtatattgatgcccttttaaaggaatttgaacaatttaacataagactg
attgaagtttccaaacaagttcgcattcccttaccggtatctaataccctttgggagcac
tgtatccggctagctaatagaacaattgtagaaggttatgccaatgttaagaagtgcagc
aatgaaggacgtgctttgatgcaattagacttccaacagtttttattgaaactagagaag
ctgactgaccttaggcccatccctgataaggaatttgtggaaacctacattaaagcctac
tacttgacagaaaatgatatggagcgctggatcaaagagcacagagagtactccacaaaa
cagctgaccaatctggtaaatgtctgcctgggatcccacatcaacaagaaggcaaggcag
aagctacttgcagctattgatgacctagacaggccaagaagataa
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