Geotrypetes seraphini (Gaboon caecilian): 117354161
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Entry
117354161 CDS
T09159
Symbol
PEX1
Name
(RefSeq) peroxisome biogenesis factor 1 isoform X1
KO
K13338
peroxin-1
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
117354161 (PEX1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gsh04131
]
117354161 (PEX1)
Membrane trafficking [BR:
gsh04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
117354161 (PEX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
PEX-2N
PEX-1N
AAA_lid_3
AAA_16
AAA_14
nSTAND3
AAA_22
AAA_33
RuvB_N
ABC_tran
AAA_18
NPHP3_N
RNA_helicase
TIP49
AAA_5
DUF815
Sigma54_activat
AAA_28
AAA_25
TsaE
AAA_29
AAA_2
IstB_IS21
NACHT
Mg_chelatase
AAA_7
APS_kinase
Viral_helicase1
Parvo_NS1
ATPase
KTI12
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
117354161
NCBI-ProteinID:
XP_033787030
UniProt:
A0A6P8PXI0
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All DBs
Position
2:421054742..421211812
Genome browser
AA seq
1286 aa
AA seq
DB search
MLGEGSGSRGGSAVSLRFRNLRNCFLHLSRRLVAQLRLQQNQAIEVSWGEEPIFLSWVEL
HHFDYHGENIVEINRCLGEKFGLKDGEQVFLKPCSQVLSCEHVEVEPLSADDWEILELHA
SSLEKHLLDQIRIVFPGAIFPVWVEQHTCIYIRIGALTPLATYGRLEHLTELVVCPKPRQ
PEGDISYLPSSTTRVIPERFRENESTSKEILNKQSAREAVLNIGGNGQDMPDTRETFFSS
KFTNLWSLLGRVFSLRLENQQTPLRASEITASKDSLLIFIQLKAVFRTCKNWPHKVPKTS
SAHPSHSDENSVHVFPWNFEPDALLPDIVVTCGELIKLPSPRQRQEETRQSLLSLDEQKQ
DGAPQSTENSKLNIGRNVSEASMVKIVWHKFEDLKNAIKFKTRDERMHVGKIWIPRCLRK
RLNIEPSAAVLVKSSCLAPKIPTSLKLQPKLILDKNTNEEEIKSSFSTWVQLGSSVAFPW
VVASTDSIQLPLKEGVKEFVLTVIHPTFEENSSANIFMLSPSFLQKTSIKVIMQPIKAEV
DHQNSADDIDQNLPFYDLSCLGGVAKLGKSSFEHITYSLLGSAVSRQLATTVVGLRSGAL
LLTGIKGSGKSTLARAICKEAFDRLEAHVEEIDCKSLRGKRFKTIQHKLEETIAEAVWRQ
PSVILLDDMDHIAGVPPSPEQEQTPEALQNRRVAQALKDKMKDVIFQGSLIAVIATSQSE
HSLHPSLVSTQGTHLFQCYKHIPSPTQEQRGEILCSVIQNKLGIDIKRLEELDLQFVAKE
TEGYVAGDFTMLVDRAIHAYVSKRRAYVKEELVLSTADFQKALQGFTPTSMRNIILHKPK
DLGWEKVGGLHDVQQILLDTIQLPAKYPELFANLPIRQRSGILLYGAPGTGKTLLASVIA
RESGMNFISIKGPELLNKYIGASEQAVRDVFNRAQAAKPCILFFDEFDSIAPRRGHDNTG
VTDRVVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLRPGRLDKCLYCSPPDEAARLE
ILKALSHSLHLTEDVDLQYLAAVTEHFTGADLKALLYNAQLEAVHVNLLSNLPQETGSSS
DSDISLSSMIFLNHSSGSDDSTGDAEGSIEPSLLSTESSEPVPEDPRSNIWRLYFGSSYE
SELGNGTPSELNSQCLSGPNSITHDFSGLIIRDLVSSQPLAFITSSQEGYQALNQEQIEQ
LRTEISVIKANYKNGEDVSHGQAGPAKNNVFVCQSHLLIALGNTRPSISQKDWKSFIELY
DNFQNPGKTKGQSRGTVRAGQKVTLA
NT seq
3861 nt
NT seq
+upstream
nt +downstream
nt
atgctaggagaggggagtgggtctcgcggcggctctgcggtctccttaagattcaggaat
ttgcggaattgttttctgcacctttccaggcgattggtggcgcagctgcgtttgcagcag
aaccaagccatagaagtgtcctggggtgaagaacctatattcctgagctgggtggagctc
catcactttgattaccatggggaaaatattgtagaaattaatcgatgtcttggggagaaa
tttggcttgaaagatggagaacaagtgttcctcaagccttgctcccaggtcctatcttgt
gaacatgtagaagttgaacccctttcagctgatgactgggagatattggagctacatgct
tcctctcttgaaaaacatcttcttgatcagattcgaattgtgtttcctggagccattttc
ccagtttgggttgagcagcatacctgtatttatatcagaattggtgcactaacaccacta
gctacctatggaagactagaacatctcacagagcttgttgtctgccccaaaccacgccaa
cctgaaggggatatctcgtatttgccctcctcgacgactcgtgtcatacctgaaagattc
agagaaaatgagtcgacatctaaagaaattctgaacaagcagagtgccagagaagctgtg
ttgaatataggaggcaacgggcaggatatgcctgatacaagagagacatttttctctagt
aaatttacaaatctgtggagccttctgggcagggttttctctctacgcttagagaatcag
caaacacctttacgtgctagtgagataacagcatccaaagattctttgttaatcttcatt
cagcttaaggctgttttcagaacgtgcaaaaactggccccacaaagtcccaaagacatca
tctgctcatcccagtcacagcgatgagaactctgtccatgtatttccatggaatttcgaa
ccagatgctttactaccagatatcgttgtaacctgtggggaactcattaaattgccctct
ccaagacagcgccaagaagagacaagacagagtttgctgtcccttgacgagcaaaaacaa
gatggtgctcctcagagcactgaaaattccaagttgaacattggcagaaatgtttctgag
gcttccatggtgaaaattgtttggcacaagtttgaggacctgaaaaatgccataaagttt
aaaaccagggatgagcgtatgcatgttggaaaaatctggattcccagatgcctgaggaag
aggctgaatatagagccttctgcagctgtcctagtaaaatcatcttgtttggcccctaaa
attcccacctcacttaagctacaacccaaactgattttggataaaaatacaaatgaagaa
gaaataaaatcttccttcagtacctgggtacagttagggagttctgtggctttcccttgg
gttgtggcatctacagacagtattcagctgccccttaaagaaggagtgaaggagtttgtt
cttactgtaatacatcctacctttgaagagaacagttcagcgaatatttttatgctgagt
cccagctttctccagaagaccagtataaaagttatcatgcaacccataaaagcagaagta
gaccaccaaaattcagcagatgatattgaccagaatttgccattttatgacctaagctgc
ttgggaggagttgctaaattgggaaaatcatcatttgagcacatcacctatagtctcttg
ggaagtgctgtatctcggcaactagccactacagttgtgggactccgcagtggagcgctt
ctgctcacaggaataaagggcagtgggaaatcaactttggcaagggctatttgcaaagaa
gcatttgacaggctagaagcccatgtggaagaaattgactgtaaatccttaagaggtaaa
agatttaaaactattcaacataaattggaggagaccatagcagaggcagtgtggagacaa
ccatcagtcatcctgttagatgacatggatcatattgcaggagttcctccttcaccagag
caagagcaaactcctgaagctcttcagaatagacgtgtagcacaagctttgaaagacaag
atgaaggatgtgattttccaaggcagtctaattgcagtgattgccactagccagtctgaa
cattccctgcatccttcacttgtttccactcaggggacccacctgttccagtgctacaaa
catatcccatcgccaacacaggagcaaagaggtgaaattttgtgttctgtgatacaaaat
aaacttggtattgatataaaaaggttggaggagcttgatcttcagtttgttgcaaaggaa
acagaagggtacgtggcaggagatttcacaatgctagtggatcgtgctattcatgcttat
gtttcaaagagaagagcgtatgtgaaagaagaactggtgttatcaaccgcggatttccaa
aaagcattgcaaggctttactcctacatctatgagaaatattatccttcataaaccaaaa
gacttaggctgggaaaaggttggtggcttgcatgatgttcagcagatacttctggataca
atccagctgccagcaaagtatccagaattatttgcaaatttacctatacgccaacgatca
ggcattttgctatatggagctcctgggactgggaaaactcttttggcaagtgtaattgct
cgggaaagtggaatgaattttatcagcattaagggcccagagctgcttaataaatatatt
ggagctagtgaacaagctgtgcgagatgtctttaatagagcacaagcagctaagccctgc
attctgttttttgatgaatttgactcaattgctcctcgccgaggtcatgataatactggt
gtgacagacagagtagttaatcaactgctgactcaactggatggtgtagaaggcttacag
ggagtttatgtattagcagctaccagtcgccctgatttaattgaccctgctctgttgagg
cctggtcgactggataaatgcctatattgctcacctccagatgaggccgctcggcttgaa
atcctaaaagcattgagtcattccttgcatctgacagaggatgtggaccttcagtatttg
gcagcagtgacggagcattttactggagctgatctgaaagctttgctttacaatgcccag
ttagaggcggtacatgtcaacctgctatcaaatttaccacaagagacaggttctagttct
gacagtgacatcagtctgtcgtccatgattttcctaaatcacagcagtggatctgatgat
tcaacaggggatgcagaaggcagtatagaaccttctttgttatccacggaatcttcagag
ccagtccctgaagatcctcgctccaatatatggcgcctttattttggaagctcctatgaa
tccgaactaggaaatggaacaccatcagaactgaattctcagtgcctttctggaccaaac
tctataacacacgatttttctgggttgattataagagatctcgtttcctcacagccttta
gcattcataacatcttcgcaagaaggataccaggcgcttaatcaggagcaaatagaacaa
ctcaggactgaaatcagtgtcatcaaagccaactacaagaatggggaggatgtgtcccat
ggtcaagctgggccagccaaaaataatgtgttcgtttgccagtcccatctattaattgca
cttggcaacacaagaccgtcaatcagtcaaaaagactggaagagttttatagagctctat
gataatttccagaatcctggcaagacgaaaggtcagagcagaggcactgtaagagcaggg
cagaaagtcactttagcataa
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integrated database retrieval system
