Geotrypetes seraphini (Gaboon caecilian): 117354276
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Entry
117354276 CDS
T09159
Symbol
ITGA2
Name
(RefSeq) integrin alpha-2 isoform X1
KO
K06481
integrin alpha 2
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh03271
Virion - Rotavirus
gsh04145
Phagosome
gsh04510
Focal adhesion
gsh04512
ECM-receptor interaction
gsh04810
Regulation of actin cytoskeleton
gsh04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03271 Virion - Rotavirus
117354276 (ITGA2)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117354276 (ITGA2)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
117354276 (ITGA2)
09144 Cellular community - eukaryotes
04510 Focal adhesion
117354276 (ITGA2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
117354276 (ITGA2)
04810 Regulation of actin cytoskeleton
117354276 (ITGA2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gsh04147
]
117354276 (ITGA2)
04515 Cell adhesion molecules [BR:
gsh04515
]
117354276 (ITGA2)
04090 CD molecules [BR:
gsh04090
]
117354276 (ITGA2)
Exosome [BR:
gsh04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
117354276 (ITGA2)
Exosomal proteins of bladder cancer cells
117354276 (ITGA2)
Cell adhesion molecules [BR:
gsh04515
]
Integrins
Integrin alpha subunits
117354276 (ITGA2)
CD molecules [BR:
gsh04090
]
Proteins
117354276 (ITGA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
Integrin_A_Ig_2
FG-GAP
Integrin_A_Ig_3
VWA_2
FG-GAP_3
FG-GAP_2
ITGAX-like_Ig_3
Integrin_alpha
Motif
Other DBs
NCBI-GeneID:
117354276
NCBI-ProteinID:
XP_033787393
UniProt:
A0A6P8QIX4
LinkDB
All DBs
Position
1:complement(54166012..54311283)
Genome browser
AA seq
1175 aa
AA seq
DB search
MKTIRRRSGFLLLIVQGIFLNCYEAYNIGISKPKIFSGPPSEQFGYAVQQFVNQNGKWLL
VGSPWSGYPNNRTGDIYKCAVDSNKSTCEKLNLQDVTGIKNATEIKGNMNLGLTLIRNAK
TGGFLTCGPLWAQQCGNQYYTTGVCSDVSPSFQILRSFSPALQTCSSYIDIAVVCDESNS
IYPWIEVTKFLKKFVQGLDIGPTETQVSLIQYGNDPRIVFRMNTYQTKEEMENAVSKTEQ
RGGDQTNTFKAIDYTRAYAFSPQYGGRPQATKVMVVVTDGESHDNSLLKQVIDRCNEDNI
TRFGIAVLGYYNRFNIDAKNLINEIKAIASPPTENYFFNVSDEAALLEKAGTLGERIFSI
EGTMQGGNTFQMEMSQVGFSAYYSKQKDVMMLGAVGAYDWSGTVVQQTANQVSIYSRDAF
ETILQDKNHSSYLGYSVTVLTIENEVNFVAGAPRTNYTGQVVVYNVNSKGNISILQYQKG
EQIGSYFGSVVCSVDVNKDSITDVLLVAAPMFMNDLKKEEGRVYKFTVTKGILGQRELLE
GPESGGDSRFGAAIAALSDIDLDGFNDVVVGAPLENQNSGAIYIYNGNKITIRNKYSQKI
LGSTIGQQLQYFGRSVDGHEDLNDDTITDLSIGAFGKVVQLWSQSIADVSVKAIFTPDKI
ILLNKNSELTVKICLIAQFRPLRAKHEMDIKYNATLDADLVSSRVTSRGLFKENNERFVQ
MNIVVGTGETCSEHVFNVQEPSDAMNALSLRIDVFPQKPGTSPVLNPYSSASTEFFVPFS
KDCGEDEICVSDLALEIQQKTELDNKQLYIVNNKNRRLSFRVNLLNKKENAYNTRIDVIF
SENLFFASSSLPTDGTEVLCQTGKYQELVSCQVGYPVFRKGQQVSFDISFDFNLKHLQNT
VFIHFQALSESNEEQELDNMVNISVPVRYEAEIHFTRITNINFYEVYSTGHIPSPVHNLN
DIGPEFNFTVKITTGSIPINMAFVTIQFPEYTKGHNQLMYLTGVDTDQANGVTCDAIINP
LKIGKEPYFVSFKEENFRSTKELSCETATCNTFKCWLKDLNLKGEYFVNVSTRIWNGTFA
VSTFQALQLVASAEIDTLNPEIFVIDNNKLNIPLAILKPDGKSEVPIGILIGSVIAGLLL
LAALIALLWKFGFFKRKYEKLMKNEEENGENTVLN
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atgaagacgataagaagaagaagcgggtttcttctcttgattgtgcaaggaatcttcctt
aattgttatgaagcatataacattggaatctccaaaccaaagatcttttctggtccccca
agtgagcaatttggatatgcagttcagcagtttgtaaatcaaaatgggaaatggttgttg
gttggctcaccatggagtggttatccgaataatagaacgggggatatctataaatgtgct
gttgactccaacaagagcacatgtgaaaaattgaacttacaagatgtaacaggcataaaa
aatgctacagagataaaaggaaacatgaatctcggtttgactttgataagaaatgcaaaa
acgggagggtttttgacatgtggtcctttgtgggctcagcaatgcggaaaccaatattac
acgacaggcgtctgctcagatgtcagtccttctttccagatcctacgaagcttttctcct
gctctccaaacgtgctcctcatatatagatatcgctgttgtgtgtgatgagtctaacagt
atttatccatggattgaagtgacaaaatttttaaaaaaatttgtgcaaggtctagatata
ggacccacagaaacacaggtgagcttaattcagtatggaaatgacccaagaatagtattc
cgaatgaacacttaccagacaaaagaagagatggaaaatgcagtatctaaaaccgagcaa
agaggtggagatcaaactaacactttcaaagcaatcgattatacacgagcatatgcattt
tctcctcaatatggtggacggccacaagctacaaaagtcatggtagtggtgacagatggt
gaatcacatgacaattcattattgaaacaagtaattgatagatgcaatgaagacaacatt
acaaggtttggcatagcagtcctgggatactacaacaggtttaatattgatgcaaaaaat
ttaattaatgaaataaaagcaattgccagtcctcctactgaaaactatttcttcaatgtg
tcagatgaggctgcactgttagagaaagcaggaacgctgggggaacgcattttcagtatt
gaaggtacaatgcaaggaggcaataccttccaaatggaaatgtcacaggttggcttcagt
gcatattactcaaaacaaaaggacgttatgatgttgggtgctgttggagcctatgactgg
agtggcacagtagtccagcagacagcaaaccaagtttctatttactctagggatgcattt
gagacaattctacaagacaaaaaccacagctcctacctagggtattctgtcactgtactt
accattgaaaatgaagtaaattttgttgctggtgctcctcgaactaattacactggacaa
gtagtagtgtataatgttaacagcaaaggcaacatttcaatcctccagtaccagaaaggg
gaacagattggttcctactttggcagtgtggtttgttcagtggatgtaaacaaagattca
attactgatgtcttattggtggctgctccaatgttcatgaatgatctaaagaaagaagaa
ggccgggtctataagtttactgtcacaaagggaatcctaggtcaacgagaacttctggaa
ggacctgagagtgggggtgacagtcgatttggagcagccattgcagccctctcagatatc
gatttggatgggttcaatgatgtcgtagtaggcgcacctttagagaatcagaactctgga
gccatttatatttacaatggaaataaaataactatacgcaacaaatattcccagaaaatt
ctgggatctacaatcggtcagcaactacagtactttggaagatcggtggatggacatgaa
gacttaaatgatgacactatcactgacctttccattggtgcctttggaaaagtggttcag
ctctggtctcagagcatagcggatgtgtctgtgaaggccatatttacacctgataagatc
attctcttaaataagaactctgaattgactgtaaaaatatgcctcattgctcagttccgt
cctcttagggcaaaacatgaaatggatatcaaatacaatgcaacactagatgctgacctt
gtatcatctagagtgacttccagagggttatttaaagaaaacaatgagagatttgttcag
atgaatattgtagtgggtacaggagagacctgctctgaacatgtgtttaatgtccaggaa
ccttctgatgccatgaatgccctaagtctgcgcattgatgttttccctcagaagcctggt
accagccctgttctcaatccatactcctctgcatccaccgaattctttgttcctttctca
aaagactgtggtgaagatgaaatttgtgtctcggatctggcccttgagattcagcagaaa
acagaacttgacaataaacaactctatattgtcaacaacaagaacaggaggctatcgttt
cgtgtgaatttgctgaacaaaaaagaaaatgcatacaacactagaattgatgttattttt
tcagaaaacttgtttttcgcttcatcttcacttccgactgatggcactgaagtgttgtgt
caaactggcaagtaccaggaattggtgagctgtcaagttggttatcctgtttttagaaaa
ggacaacaggtgtcttttgatattagctttgattttaatctcaagcacctccagaataca
gtgtttatacatttccaagcattgagtgaaagtaatgaagagcaagaactggacaacatg
gtcaacatatcagttcctgtccgatatgaagctgaaattcatttcacaaggataaccaac
atcaatttttatgaagtgtattctactggtcatattccttctcctgtccataatttaaat
gatatcggccctgaattcaactttacagtgaagattacaacaggaagtattccaataaac
atggcatttgtgaccatccagtttccagagtacaccaaaggacacaatcagctgatgtac
ttgactggagtggacacagaccaggcaaatggtgtcacttgtgatgcaataataaaccca
ctgaaaattggaaaagaaccatattttgtatctttcaaggaggaaaattttagatctaca
aaagagctgagctgtgaaactgcaacctgtaatacatttaagtgttggctgaaggactta
aacttgaagggggagtatttcgtgaacgtatcaaccagaatctggaatggcacttttgca
gtttcgactttccaggcgttgcagttggtggccagtgcagaaatagatacattgaaccca
gaaatctttgtgattgataataataaactaaatattccacttgcaatattaaaacctgat
ggaaaatcagaggtgcctataggtattctgattggaagtgtcatagctgggctgcttttg
ctggctgcactgattgctctcttgtggaagtttggattttttaagaggaaatatgaaaaa
ttgatgaagaatgaggaagaaaatggagagaatacagtgctaaattga
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integrated database retrieval system
