Geotrypetes seraphini (Gaboon caecilian): 117354278
Help
Entry
117354278 CDS
T09159
Symbol
ITGB1
Name
(RefSeq) integrin beta-1 isoform X1
KO
K05719
integrin beta 1
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh03271
Virion - Rotavirus
gsh04145
Phagosome
gsh04510
Focal adhesion
gsh04512
ECM-receptor interaction
gsh04514
Cell adhesion molecules
gsh04530
Tight junction
gsh04810
Regulation of actin cytoskeleton
gsh04820
Cytoskeleton in muscle cells
gsh05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03271 Virion - Rotavirus
117354278 (ITGB1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117354278 (ITGB1)
04514 Cell adhesion molecules
117354278 (ITGB1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
117354278 (ITGB1)
09144 Cellular community - eukaryotes
04510 Focal adhesion
117354278 (ITGB1)
04530 Tight junction
117354278 (ITGB1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
117354278 (ITGB1)
04810 Regulation of actin cytoskeleton
117354278 (ITGB1)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
117354278 (ITGB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gsh04131
]
117354278 (ITGB1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gsh04147
]
117354278 (ITGB1)
04515 Cell adhesion molecules [BR:
gsh04515
]
117354278 (ITGB1)
04090 CD molecules [BR:
gsh04090
]
117354278 (ITGB1)
Membrane trafficking [BR:
gsh04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
117354278 (ITGB1)
Exosome [BR:
gsh04147
]
Exosomal proteins
Proteins found in most exosomes
117354278 (ITGB1)
Cell adhesion molecules [BR:
gsh04515
]
Integrins
Integrin beta subunits
117354278 (ITGB1)
CD molecules [BR:
gsh04090
]
Proteins
117354278 (ITGB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
Integrin_b_cyt
EGF_integrin
PSI_integrin
I-EGF_1
EGF_2
EGF_Teneurin
vWA_SIBA-E
Motif
Other DBs
NCBI-GeneID:
117354278
NCBI-ProteinID:
XP_033787395
UniProt:
A0A6P8PY83
LinkDB
All DBs
Position
2:complement(449585050..449819388)
Genome browser
AA seq
803 aa
AA seq
DB search
MDFKLFFISSLLSCSIWYGSAQQGGSECLKANAKSCGECIQAGPNCGWCTKLDFLQEGET
TSARCDDLVTLLSKGCPLNMTENPRGSQKVSKNKDVTNRSKGTAEKLKPEDITQIQPQQL
ILQLRSGEPQTFPLKFKRAEDYPIDLYYLMDLSFSMKDDLENVKRLGTDLMKEMKKITSD
FRIGFGSFVEKTVMPYISTTPAKLRNPCTGDQNCSSPFSYKNVLNLTDNGNLFNDLVSRQ
HISGNLDSPEGGFDAIMQVAVCGEQIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDG
RCHLVNNMYTMSHYYDYPSIAHLVQKLSENNIQTIFAVTEEFQPVYKELKNLIPKSAVGT
LSANSSNVIELIIESYNSLSSEVILENSKLPEGVTINYKSYCKNGVNGTGENGRKCSNIS
IGDEVQFEISVTAHKCPKKGQNETIKIKPLGFTEEVEIILQFICECDCQEKGIPESPECH
NGSGTFECGACRCNEGRIGRLCECSTDEVNSEDMDAYCRKENSSEICSNNGECICGQCAC
KKRENANEIYSGKYCECDNFNCDRSNGLICGGNGVCKCRVCECFPNFTGSACDCSLDTTS
CEAANGQICNGRGTCECGRCKCTDPKFQGATCEMCQTCPGVCTEHKECVQCRAFNKGAKK
ETCSKECMYFNITTVENSKKLPQPGQADAQTICKEKDAEDCWIYFTYSVNANNEVLVHVV
EKPECPSGPDIIPIVAGVVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWDAQ
ENPIYKSPINNFKNPNYGRKAAL
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atggattttaaactctttttcataagtagtttactcagttgttccatttggtatggatct
gctcagcaaggtggaagtgaatgtttaaaagccaacgcaaagtcatgtggagaatgtata
caagcagggccaaactgtgggtggtgcacaaagttggacttcttacaagaaggtgagaca
acttcggcccgatgtgatgatttagtaactttgttaagtaaaggctgcccgttaaatatg
accgaaaatcctagaggaagtcaaaaagtgagcaaaaataaagatgtaacaaatcgcagc
aagggtactgcggagaagctcaagccagaagatattactcagatccagcctcagcagtta
atattgcagctgcggtcaggagaaccacagacatttccattaaaatttaagagagcagaa
gactacccaatagatctttattatcttatggacctctctttttctatgaaagatgacctg
gagaatgtaaagcgtcttggtactgatcttatgaaagaaatgaagaaaattacttcagat
tttaggattggctttggttcttttgtggagaagacagtcatgccttatattagtaccact
ccagctaaacttagaaatccgtgcactggtgaccaaaactgctcaagccctttcagctac
aaaaatgtactcaatctgacagacaatgggaatttgttcaatgacctggtcagtagacaa
catatttcaggcaatttggattctcctgagggtggatttgatgctataatgcaagttgca
gtttgtggagagcaaattggctggagaaatgttacccgtttattggtattttccactgac
gctggattccattttgctggagatggtaaacttggtggaattgttttaccaaatgatgga
agatgtcaccttgtaaacaacatgtacacaatgagccattactatgattatccttctatt
gcacaccttgtacagaagcttagcgagaataatattcaaaccatttttgctgtcactgag
gaatttcaacctgtttataaggagctgaaaaatttgattccaaagtcagcagtaggaaca
ctgtctgctaattccagcaatgtgattgagctgattattgaatcctataattctctgtct
tcagaagtcatcttggaaaacagcaaactaccagaaggagtaacaataaactataaatca
tactgcaaaaatggggtgaatggcacaggagagaatggaagaaaatgttccaatatttca
attggagatgaggtgcagtttgagattagcgtgacagcccacaagtgtccaaagaaagga
cagaatgaaaccattaaaatcaagcccttgggtttcactgaggaagtggagattatcctt
cagttcatctgtgaatgtgattgtcaggagaaaggaatcccagagagcccagaatgtcat
aatggcagtggaacatttgagtgtggagcttgcaggtgtaatgagggtcgcattggtaga
ctatgtgaatgtagcacagatgaagtaaacagtgaagacatggatgcatactgcagaaag
gaaaacagttcagaaatctgcagtaacaatggagagtgcatttgtggacagtgtgcctgt
aagaaaagagaaaatgctaatgagatctactctggcaaatactgtgaatgtgacaacttc
aactgtgacagatctaatggcttgatttgtggaggtaatggtgtttgcaagtgccgagtg
tgtgagtgcttccctaacttcactggtagtgcttgtgactgctctttggatacgacatca
tgtgaagcagcaaacggacaaatatgtaatggcagaggaacctgtgagtgtgggcggtgt
aagtgcactgatcccaagttccagggagccacttgtgagatgtgtcagacctgccctggt
gtgtgtactgaacacaaagaatgtgtccagtgcagagcttttaacaaaggtgctaagaaa
gagacctgctcaaaagagtgcatgtatttcaatataacaactgtggagaacagcaaaaaa
ttgcctcagcctggtcaggctgatgcacagacaatctgtaaagagaaggatgcggaagac
tgctggatctatttcacctactcagtgaatgcaaacaatgaagtccttgtccatgtggtg
gagaagccagagtgtcccagtggtcctgacatcattcccattgtagctggtgtagttgct
ggcattgttcttattggtctggctctgttgctgatctggaaactgctcatgattattcat
gatagaagagaatttgctaaatttgaaaaagaaaagatgaatgctaagtgggatgcgcaa
gagaatccaatttacaagagccctataaataatttcaagaatccaaactatggacgtaaa
gctgctctctaa
DBGET
integrated database retrieval system
