Geotrypetes seraphini (Gaboon caecilian): 117354316
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Entry
117354316 CDS
T09159
Name
(RefSeq) sonic hedgehog protein-like
KO
K11988
sonic hedgehog
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
117354316
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gsh01002
]
117354316
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
gsh00536
]
117354316
Peptidases and inhibitors [BR:
gsh01002
]
Cysteine peptidases
Family C46: hedgehog family
117354316
Glycosaminoglycan binding proteins [BR:
gsh00536
]
Heparan sulfate / Heparin
Morphogens
117354316
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HH_signal
Hint
Peptidase_M15_3
DUF7764
DUF6212
Ribosomal_S6e
Motif
Other DBs
NCBI-GeneID:
117354316
NCBI-ProteinID:
XP_033787506
UniProt:
A0A6P8QL77
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Position
2:467320321..467380136
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AA seq
422 aa
AA seq
DB search
MDEMLLLTRILLVGSICALLVPSGLTCGPGRGIGKRRHPKKLTPLAYKQFIPNVAEKTLG
ASGRYEGKITRNSERFKELTPNYNPDIIFKDEENTGADRLMTQRCKDKLNALAISVMNQW
PGVKLRVTEGWDEDGHHSEESLHYEGRAVDITTSDRDRSKYGMLARLAVEAGFDWVYYES
KAHIHCSVKAENSVAAKSGGCFPGLARVTLETGASKAVKDLSPGDRVLAADEQGKLVYSD
FILFLDKEEAIRKVFYVIETSQPQERVRLTAAHLLFVAQSQTNGSRAFKALFASNIQPGQ
QVYVADRKGTKLKAVTVQKVYQQEYTGAYAPVTAHGTLFIDHVLASCYAVIEEHSWAHWA
FAPLRAGYWIFSLIFPKDYSLFSSASSQGDGIHWYSQILYQLGTWVLGNDTLHPLGMATK
CS
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atggacgaaatgctgctgttgaccagaattctgttggtgggttccatctgcgctcttttg
gtcccctctgggctgacttgtggaccgggtaggggcattggaaaaagaagacaccccaaa
aaattgacccctttagcctataagcagtttattcccaatgtggcagagaagaccctaggg
gccagtggaagatacgaagggaagatcacaagaaactccgagagatttaaagaactaacc
ccaaattacaatcctgacattatttttaaggatgaagagaacactggagctgacagactg
atgacacagagatgcaaagataaactgaatgccctggctatctcagtgatgaatcagtgg
cctggggtgaagctgcgggtgaccgagggctgggatgaagatggtcatcattcagaggag
tcactgcattatgagggccgagcagtggacatcactacctcagatagagaccgaagcaaa
tacggcatgttggccaggttggctgtggaggctggatttgattgggtttattatgagtcc
aaagcccacatccactgctcagttaaagcagaaaactctgtcgctgctaaatcaggaggt
tgcttccctggcttggctagagtgaccctggagactggagcctccaaagcagtgaaagat
ctaagtccgggagacagagtgctggcagccgatgagcagggcaaattggtctacagtgac
ttcatcctcttccttgataaagaagaagccatcagaaaagtattttatgtgatcgagacc
tcccagcctcaggagagggttcgcctgactgctgcccacctcctatttgttgctcaaagt
caaaccaacggctctagagctttcaaggctctctttgctagcaatatccagcctggacag
caggtgtatgtagcggaccggaagggcacaaagctgaaggcagtcacagtgcagaaagta
taccagcaggaatacactggggcctatgctccagtgacagctcatggaaccctctttatc
gatcatgttctggcttcctgctatgcagtcattgaagaacacagctgggcacactgggca
tttgcccctttgagagcgggctactggatcttttctttaatattcccgaaagactacagt
ctcttttcatctgcatcttctcaaggggatggtattcattggtactcccaaatcctttat
cagctagggacctgggttttgggcaatgacactcttcacccactgggaatggcaacaaag
tgcagttga
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