Geotrypetes seraphini (Gaboon caecilian): 117354362
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Entry
117354362 CDS
T09159
Symbol
GARS1
Name
(RefSeq) glycine--tRNA ligase
KO
K01880
glycyl-tRNA synthetase [EC:
6.1.1.14
]
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
117354362 (GARS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
gsh01007
]
117354362 (GARS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gsh03016
]
117354362 (GARS1)
03029 Mitochondrial biogenesis [BR:
gsh03029
]
117354362 (GARS1)
Enzymes [BR:
gsh01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
117354362 (GARS1)
Amino acid related enzymes [BR:
gsh01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
117354362 (GARS1)
Transfer RNA biogenesis [BR:
gsh03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
117354362 (GARS1)
Mitochondrial biogenesis [BR:
gsh03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
117354362 (GARS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HGTP_anticodon
WHEP-TRS
tRNA-synt_2b
OS-D
Motif
Other DBs
NCBI-GeneID:
117354362
NCBI-ProteinID:
XP_033787639
UniProt:
A0A6P8PUU1
LinkDB
All DBs
Position
2:479441524..479519498
Genome browser
AA seq
767 aa
AA seq
DB search
MHSSPLFSCCCCCFRRSMLLVWLRSVLPPRKALEFLLLPRSRAAYCSLIPRHAPPAFRDL
ALSTRRAGPATAAAAVAADARRGMDGPLEEVLAPLRQAVKEQGNLVRRLKDEKAPQVDVD
KAVAELKARKRILEAKELSLQPKDDIVDRAKLEDTLKRRFFYDQAFAIYGGVSGLYDFGP
VGCALKNNIIQTWRQHFIQEEQILEIDCTMLTPEPVLKTSGHVDKFADFMVKDMTNGECF
RADHLLKAHLQKLMSDKKCSVEKKTEMENVLTQMDNYGQEELADLFVKYGVKSPTTGNDL
SPPMSFNLMFQTSIGPGGNMPGYLRPETAQGIFLNFKRLLEFNQGKLPFAAAQIGNSFRN
EISPRSGLIRVREFTMAEIEHFVDPNDKQHPKFENVADLTILLYSSKAQVSGESAHRMKL
GEAVQQGVINNSVLGYFIGRIYLYLVKVGISPDKLRFRQHMDNEMAHYACDCWDAEAKTS
YGWIEIVGCADRSCYDLSCHARATKVPLVAEKRLNEPKTVNVVQFDASKSAVGKAYKKDA
KLVLEYLAICDECYITEMEKLLNEVGEFSIETEGKTFKLTKDMVNVKRFQKTLHVEEIVP
NVIEPSFGLGRIMYTVLEHTFHVREGDEQRTYFSFPAIVAPYKCSVLPLSQNQEFMPFVR
DLSEALTKNGISHKVDDSSGSIGRRYARTDEIGVAFGITIDFDTVNKSPHTATLRERDSM
RQIRAEISVLPAIIQDLTNGYITWADVESQYPVFEGQETGRKDIVEE
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atgcactcttcccccctcttttcctgctgctgctgctgctttcgccggtccatgctgctg
gtgtggctgcgctctgtgctgccacctcgcaaagcgcttgagttcctcttgctccccagg
tctcgcgctgcctattgttccctaatccccaggcacgcgccaccggctttcagggatctc
gcgctctccacccgccgcgcgggtcctgcaacagcagcagcagcagtagcagccgacgcg
agacgcggcatggacggtccgctggaagaagtgctggctcctctccgtcaggccgtcaag
gaacaggggaatctggtgcgaaggctgaaagatgaaaaagccccacaggtggacgtggac
aaagcagtggcagaactcaaggctcggaagaggatcttagaagccaaggagctgtccttg
cagcctaaggatgacattgtggaccgagcgaaactggaagacaccttgaagaggaggttt
ttttacgatcaagcttttgcaatatatggaggtgttagcggtctgtatgactttgggcct
gtgggttgtgctctgaaaaataacatcatccagacgtggaggcagcacttcatccaagaa
gaacagattttggagatagattgcaccatgcttactccagagcctgttctaaagacatcg
ggccatgtggataagtttgcggacttcatggtgaaagatatgacaaatggcgagtgcttt
cgagctgaccatctcttaaaggcacatttgcagaagttaatgtcggataagaagtgttcg
gtagagaagaaaacagaaatggaaaatgtcctgactcagatggacaactatggtcaggaa
gaacttgctgatttatttgtgaagtatggagtcaagtctcccaccactggaaatgacctt
tctccacccatgtctttcaacctgatgttccaaacctccatcggccctggagggaacatg
ccaggttacctgaggccagagacagcacagggaatcttcctcaatttcaagcgcctcttg
gaattcaaccaaggaaaactaccatttgctgctgctcaaattgggaattcttttaggaat
gagatctctcctcgttcaggacttatccgggtcagggaatttaccatggcagagattgaa
cactttgtagaccctaacgacaagcaacaccccaaattcgagaatgtggcagacctgacc
atcctcctttattcttctaaagcccaggtcagcggagagtctgcgcatcgaatgaagctc
ggagaggctgtccagcagggtgtgattaacaattcagttctagggtacttcattggcaga
atctacctctacttggtaaaggtgggcatctctccagataagctgcgtttccggcagcac
atggacaatgagatggcgcactatgcctgcgactgctgggatgcagaggccaaaacttcc
tatggctggattgaaatagtgggctgtgcagatcgctcctgctatgatctgtcttgtcat
gccagagctaccaaagttccccttgtggctgagaagcgtctgaatgagccaaaaacagtt
aacgttgttcagtttgatgcaagcaagagtgcagtgggtaaagcatataaaaaagatgct
aagctggtcttggaatatcttgccatctgtgatgaatgctatatcactgaaatggagaag
ctgcttaatgaagtaggtgaattcagtattgaaactgaagggaaaacatttaaactgacg
aaggacatggtcaatgtgaaacggttccagaagactctgcacgtggaggagattgtccct
aatgtgattgagccctcgtttggtctgggcagaatcatgtacactgttttggaacacaca
ttccatgtgcgggaaggtgatgagcagaggacgtatttcagtttcccagccattgtcgca
ccatataaatgctctgtgctgcctctgagccagaatcaggaattcatgccttttgtaaga
gatctctctgaagctttaacaaagaatggcatctctcacaaagtggatgattcttctggg
tccatcggtcgacgatatgctagaactgatgagatcggtgtagcctttgggatcacaatt
gactttgatacggttaacaagtcacctcacactgctacgctgagagaacgtgattccatg
cgacaaatacgagctgagatctctgtacttcctgccataatccaagacctgacgaatggc
tacataacatgggcagatgtggagagccagtatccagtttttgaaggacaggagactggc
agaaaggacatagtagaggaatga
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