Geotrypetes seraphini (Gaboon caecilian): 117354426
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Entry
117354426 CDS
T09159
Symbol
CSPG5
Name
(RefSeq) chondroitin sulfate proteoglycan 5 isoform X1
KO
K08116
chondroitin sulfate proteoglycan 5
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
gsh00535
]
117354426 (CSPG5)
Proteoglycans [BR:
gsh00535
]
Cell surface proteoglycans
Others
117354426 (CSPG5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neural_ProG_Cyt
Chon_Sulph_att
Motif
Other DBs
NCBI-GeneID:
117354426
NCBI-ProteinID:
XP_033787822
UniProt:
A0A6P8PGB6
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Position
2:complement(494421629..494536447)
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AA seq
733 aa
AA seq
DB search
MEAARTPRLRGWGAAALLVAFLCARAPQASPVPVWNLDPKTTSDIQRFGSEGSSGTLDHL
LARSLPDSVQEPRRNAAAGQEGEAFVKNQTWKRTEEQQSSKNPPVDSPNLAPTAGTAAAA
ATLISTDGDGSLPHAGGGIRNENNESAVCVECSGGISRESLQPDTESLAVKHEGVLEASG
VLGPTPGPVGPESIARELGGADVTAESQEDVGSGDHHRGTSANVATFPNSLQKEWSLGTY
FGSSTTLLPSPSATAKDTATASEPGGKSISPDSAEADHLLQVFQEAVLQSPSPNGKPADP
NPDWASKPEISMDPEREQHLPSESWDETASSFPAQGSTDQTLPHKETEPWADNISPPNVL
KPPEPPSKKLLAEIIDADYYDLSDLDGHSDLETFPDLDSTKTTQDKKKSSWVTSDLYSDF
ITFDESDFYPTTSFYTDGDEEGGAEEDEEDDTEAEEGAVRKPGGEDDSKPKTFTPKIHMT
ARNEKPTSVQQTFVTSQGEARPKSNPEMVKEPTQILAGSGNRSTECRSGYLRHNRTCKSV
CDIYPTYCYNGGQCYLVENSGAFCRCNTQDYIWHKGVRCESIVTDFQVMCVAVGTAALVL
LLVFMMTVFFAKKLYLLKTENYKLRKRNRYRTPSELHNDNFSLSTIAEGSHPNVRKLCDT
PSNLSPYARALAYYDNVTCQEDPNTIHKLLEPTKPFAKEEEPFNIQNATSPKHGSDTGGH
DSLEVNCLQNNLT
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atggaggcagcacggactccgcgcctgaggggctggggggccgcggcgctgctcgtcgcc
ttcctctgcgcccgcgcgccccaggcttctcccgtgcctgtatggaatctagatcctaaa
accacctcggatatccagaggtttggctcggagggcagcagtggaactttggatcatctc
ttggcaaggagtttgcctgattccgtccaagaacctcggagaaacgctgccgccgggcag
gagggagaggcctttgtgaaaaaccagacctggaagagaacggaggaacagcagtcctcc
aagaacccgcccgtagattccccaaacctggcgccgacagcaggcacagctgccgccgcc
gccactttgatttcgactgatggagatggcagcctcccccacgcaggcggtgggattcgt
aatgaaaacaatgagtcggccgtctgcgtggaatgctctggagggattagtcgtgaaagc
ttacagcccgacacggagtctttggcggtcaaacatgaaggtgttttggaagcttcagga
gtcctgggacctacacctggacctgttggcccagagtccattgcccgggagttaggcggc
gctgacgtgacagctgaaagccaggaggacgttgggagtggagatcatcaccgtgggacc
tctgcaaatgtggccacatttccaaactccttacagaaagaatggagcctggggacctat
tttggaagctccactacccttcttccgtccccaagtgctacagcaaaggatactgctacg
gcaagtgagccggggggcaaaagcattagcccagattctgcagaggccgaccaccttttg
caagtatttcaggaagcggtcctccagtcaccctccccgaatggaaaacctgcagatccc
aaccccgattgggcgtcaaagcctgagatcagcatggatccagaaagagagcaacacctg
ccctcagaatcctgggacgagacagctagtagctttccagcccagggcagcaccgatcag
acgttaccacacaaggaaacggagccctgggctgacaacatttcacccccgaatgtcctg
aaaccaccagaacccccttcaaagaagctattggccgagatcattgatgctgactactac
gatctttccgatctggatggccatagtgatttggagactttcccagatttggactccact
aaaacaacgcaagacaaaaaaaagtcatcctgggtgacatcggatctctacagtgacttt
ataaccttcgatgagtccgatttctatcccacaacttcattttacaccgatggggacgag
gaaggcggcgctgaggaagacgaggaggatgacacagaggccgaagagggcgctgtcaga
aagcctggcggcgaggacgattccaagccgaagacctttactcccaaaatacacatgacg
gcacggaacgagaagcccaccagtgtgcagcaaacattcgtcacctcccagggtgaagcg
cgccccaaatccaacccggaaatggtgaaagagccgacacagatactggctggttccggc
aacagaagcacggagtgcagaagtggttaccttagacacaacagaacctgcaagtcggtg
tgtgacatttaccccacttactgctacaacgggggccagtgctacttggtggaaaacagt
ggggcattttgcaggtgtaacacgcaggactacatatggcacaaaggagtgcggtgcgag
tccatcgttaccgatttccaagtgatgtgcgtggctgtgggcacggcagccttagtgctg
ttgcttgtcttcatgatgacggtcttctttgccaagaagctttatctgctgaaaacggag
aactacaagttgcgcaagaggaacagataccgaacaccatcagagcttcacaacgataac
ttttctctctccacgatcgctgaaggctcgcacccaaatgtaaggaaactttgcgacacc
ccatctaacctctccccttatgcccgtgcattggcttactatgataacgtaacctgtcag
gaagaccccaacaccattcacaaacttctggagcccacaaagccctttgcgaaggaagag
gaacccttcaacattcagaacgccacgtcgccaaaacatggcagtgacacaggcgggcac
gacagcctggaggtgaactgccttcagaacaacctgacttaa
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