Geotrypetes seraphini (Gaboon caecilian): 117354505
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Entry
117354505 CDS
T09159
Name
(RefSeq) zinc finger protein 615-like isoform X1
KO
K09444
interferon regulatory factor 1
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
117354505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gsh03000
]
117354505
Transcription factors [BR:
gsh03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
117354505
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF
KRAB
SPOC_AIPP2
Motif
Other DBs
NCBI-GeneID:
117354505
NCBI-ProteinID:
XP_033788048
UniProt:
A0A6P8QKP8
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Position
2:502879631..502944981
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AA seq
477 aa
AA seq
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MAEAELARELLQVVWRKEYILNSQIPHQTFTGVPVTFEDIAVYFLEDEWEMLAEWQKELY
KETMKENYETLTSLGSSPEKPSLISKIEREEDPCIRNQQDSQDRRRPRSCWRGSPVEKPE
LTVRIKQETDSCDWDQEDLRDSRWCESSRTAGYENEKCHKGCAENQETHKMLSEKDKAMF
LLKSEEGTDWRNKCNLRVLVELNPHLCTEYGKSFPGKSGVRSHEMCHTGEKPCKNSDSGK
SSSQKSNLKTHPKSHTRENTEMAEAVERRPREQHFLVYPRQVGTAPIPVASRGKKRQLMR
PWLEQQINSSSIPGLKWINKDLKIFQIPWKHAGLNGWDLETDACLFRNWAVHTGRYQLGE
RRAASWKATFRCALNSLPDIEEVKDKCINRGSSAVRVYRMLSELSRREKGIKLPRSKHRI
NSSEDSSDPEETEEAIHIPGIPADHSSYTLRRCAVQKMKIGGSDARLDIAEYSANTG
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atggccgaggccgagctggcgcgggaactccttcaagtggtctggagaaaagaatacata
cttaattcccaaatacctcaccagacatttacaggggtccctgtaacgtttgaagacatc
gctgtctattttcttgaggacgagtgggagatgttagcagaatggcagaaggagctctat
aaggagaccatgaaggagaattatgagactctgacatcactgggttcttcacctgagaaa
ccttctcttatatcaaagattgagcgagaggaagatccgtgtatcagaaaccagcaggac
tcccaagacagaaggagaccgagaagctgctggagaggctctccagttgagaaacctgag
ctgacagtacggattaagcaggagacagattcctgtgattgggatcaggaggacctaaga
gacagcaggtggtgcgagagctcccgtacagcaggttacgaaaatgagaagtgtcataag
ggatgtgccgaaaatcaagaaacccacaagatgctctcggagaaagacaaagcgatgttt
ctcctgaaatcagaggagggaacagactggagaaacaagtgtaacttaagggtcctcgtg
gaactgaatccacacttatgtacagagtatggcaaaagctttcccggtaaatcaggtgta
cgatcacacgagatgtgccacacaggtgaaaaaccgtgtaaaaattctgactctggtaaa
agttccagtcagaaatcaaatctaaaaacgcacccgaaaagtcatacgagagaaaataca
gaaatggcagaggctgttgagcgcaggcctcgagagcagcatttcctcgtctaccctaga
caagttggcacagctccaatacccgtcgcctcacgagggaaaaaaagacagcttatgagg
ccctggttggagcagcagattaactccagttccattccgggactgaaatggatcaacaag
gacttgaagattttccagatcccgtggaagcacgcaggtttaaacggctgggacttggag
acggatgcctgcctctttcggaactgggccgttcacactgggcgataccagctgggggag
cgaagggctgcgagctggaaggcgacttttcgttgcgccctgaactccttgccggacatc
gaggaggtgaaggacaaatgtataaatagaggttctagtgcggtgcgggtctacaggatg
ctatcggaactgtcgaggagagagaaaggtataaagttgcctcgaagcaaacataggata
aattcatccgaagactcctctgacccagaagagacagaagaagcaatacacatcccgggt
ataccagctgaccacagcagctacacccttcgtaggtgtgcggtccagaagatgaaaatc
ggaggctcagatgccaggttggatatcgcagagtacagtgcaaacaccgggtga
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