Geotrypetes seraphini (Gaboon caecilian): 117355057
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Entry
117355057 CDS
T09159
Symbol
COL14A1
Name
(RefSeq) collagen alpha-1(XIV) chain isoform X1
KO
K08133
collagen type XIV alpha
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
gsh00535
]
117355057 (COL14A1)
Proteoglycans [BR:
gsh00535
]
Extracellular matrix (ECM) proteoglycans
Others
117355057 (COL14A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
fn3
Collagen
VWA_2
Pur_ac_phosph_N
VWA_3
DUF4959
Motif
Other DBs
NCBI-GeneID:
117355057
NCBI-ProteinID:
XP_033788914
UniProt:
A0A6P8PYD3
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All DBs
Position
2:complement(45666521..46060473)
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AA seq
1888 aa
AA seq
DB search
MKPGRKLQTLFPLLLSALIAHFASHAQRQVGPPTKLRYNTLSEDSIQISWKAPKGQFSGY
KLLVISESEGKTNQLILQSNATRAIIQGLIPEQRYKVYITAYTEDRESKPAEGHFKFKET
PPPAPPRKNATASNKTKFRDIGYGRNSLAEGDQFTCKTPAIADIVILVDGSWSIGRFNFK
LVRLFLENLVTAFNVGSDKTRIGLAQYSGDPRIEWQLNTYVTKDAVLDAVRNLPYKGGNT
LTGLALTYILENSFKPEAGARAGIPKIGVLITDGKSQDDVIPPAKSLRDAGIELFAIGVK
NADENELKAIASEPHSTHVYNVADFNIMHTIVEGLTMTLCIRVEEQVKEIQGAVRGIVGT
PTNLVTSELTARGFRINWNHAPGKVEKYRVVFYPTRGGQPEEVVVDGSVSTVVLKNLMSL
TEYQLAVFAVYIDSASEGLRGTETTLALPMASALELRDITHNSMRTRWTGVNGATGYMIL
YAPLTEEVSPDEKEIKVGALVTDVELDGLSPSTEYTVTVYAMFGEEASDPLTAQETTLPL
SPPRNLKFSDIGHSTAKVSWESSSKKVKGFRIMYVKTDGTETNDVEVDQISTYLLKSLSS
LTEYTVAIFSIYDEGQSESLTGTFTTKKVPVPKNLEISDITTESFRASWKSISSDVALYR
LNWVPLSGGKSEEVLLKSDVNSYIIDGLSHNSEYEVSMSAIFDDESESDAVAVLAATLLK
TTSAAVTTTTTITTTTRSMTAAVRTGIRNLVIDDETTSSLQIKWQISDASVRQFRVTYIG
AKGDRGVESVMVPGRQNSLRIQPLLSDTEYKVTVTPVYYSGEGVDISAYGKTLPLSAPRN
LRVSDEWYNRVRISWDAPPSPTMGYRIVYKPISVSGPALETFVGDDITNMLIVNLLSGTE
YSLKVFASYSTGVSDALMGVAKTLDLVVTNLNAYQVRMTSMCAQWELHRHATAYRIILES
LLDGRKNEVLLSGGTSQHCFYELKPNTQYKISVYSQFQEVEGPAIGIMETTLPVPTVAPT
PPPTTPPPTTIPPAREVCKAARADLVFLVDGSWSIGDENFNKIIRFLYSTAGALDQIGAD
GTQVALVQFSDDARTEFKLDSFKDKESLLEAIQHIQYKGGNTKTGKAIKHARESLFTNNS
GMRRGIPKVLVVITDGRSQDDVNNISRDMQLDGFSIFAIGVADADYAELVNIGSKPIERH
VFFVDDFDAFKKIEDELITFICETASAMCPLSMMHGNSLAGFKMMEMFGLIEKEFSAIEG
VSMDPGTFNSFPCYRLHKDALVSQPTKYIHPEGLPSDYTITFLFRVLPDTPQEPFALWEI
LNKEFEPLVGIILDNGGKTLTFFNYDYKGEFQPVTFEGPEIRKIFYGSFHKLHVVISKTS
SRLIIDCKQVGEKAINTAGNITSDGIEVLGRMVRSRGPRDNSAPFQLQMFDIVCTTSWAN
RDKCCELPGLRDEENCPAFPHDCDCAQDGKGPSGPPGPPGGPGIRGAKGQRGESGSLGPV
GPRGEHGSTGPQGPPGPQGPSGLSIQGPSGSPGEKGDKGDSGNSGQQGVPGVSGSPGRDG
IQGPRGVPGNDGSIGPQGSPGSIGSPGSPGSPGVPGVKGPQGDSGPVGFPGSKGERGERG
DTQSQTMVRAIARQVCEQLIQSHLARYNSMLNQIPSQSTSVRTVSGPPGEPGRQGPPGPQ
GDQGPAGRTGFPGNPGQAGTHGDRGLPGEKGERGNPGVGAQGSRGPPGPTGTPGESRAGS
QGPPGPPGPRGQPGHTGTSGPQGQQGQPGYCDPSSCAGYGAVGGYSEPTDQDIPVVQLPH
NTYQIYDPEDLYDGDQESYIIHGSYPRPAPYPQPSYPDPGPVQPEFTPVQEEREAFEIRS
PGMNRVSRDTSRKRAVYSLLKRKKTKDS
NT seq
5667 nt
NT seq
+upstream
nt +downstream
nt
atgaagcccggacgcaagttgcagaccttgttccctttgcttttatcagcattaatagca
catttcgctagccacgctcagcgtcaagtgggacccccaacaaaactacgatataacaca
ttatctgaggacagtattcagatctcatggaaagccccaaaaggacaatttagcggatat
aaacttcttgtcatttcagaatcagaggggaaaaccaaccaattgatccttcagagtaat
gcaactagagcaattatccaaggtctcataccagaacaacgctacaaggtttacatcact
gcatatactgaagacagagagagcaagccagctgaaggtcactttaaatttaaggaaaca
ccaccaccagcaccacccagaaagaacgcaactgcttcaaataaaaccaaattcagggac
ataggatatgggagaaattcgcttgcagaaggagatcagttcacttgcaagactcccgca
atcgctgatatcgtcatcctggtggatggttcctggagcatcggcaggttcaatttcaaa
cttgttcggctcttcctggaaaacctggtgactgctttcaatgtgggctctgataaaacg
agaataggtcttgcacagtacagtggtgacccccgcatagaatggcaattgaacacctat
gtcacaaaagatgctgtgcttgatgcagtccggaatcttccgtacaaaggaggaaacaca
ttaacaggtctggctttaacatatattttggaaaacagttttaagcccgaggctggcgca
agagctggaataccaaaaattggtgttctgatcactgacggaaaatcccaagatgatgtg
attccacctgccaaaagtttacgggatgctggcattgagctgtttgccatcggtgtgaaa
aatgccgatgagaatgagctgaaggcaatagcctcagaaccccacagcacacacgtctac
aatgttgctgattttaacatcatgcacaccattgtggaaggccttaccatgactctgtgt
attagagttgaagagcaagtgaaggaaattcaaggagcagtgcgtggcattgtgggaact
ccaacaaatttggtaacatctgaattaacggccaggggatttcgcattaattggaatcat
gcgccaggaaaagtggaaaagtacagagttgtgttttatccgactagaggaggacaacca
gaagaggtggtggtggatggaagtgtttctacagtagtactgaagaacctcatgtctttg
actgaatatcagctagcagtgtttgcggtatatatcgattctgccagcgagggcctacgg
ggcaccgaaactacacttgctttgccaatggcatcggctcttgagttgcgtgacatcaca
cacaacagtatgaggacaagatggactggagtgaatggagccactggctatatgattctc
tatgcgcccctcactgaggaagtgtcaccggatgaaaaagagataaaagttggagcactg
gtcactgatgtagaactggatggattgtcccccagtacagaatacaccgtgacggtttat
gccatgtttggggaggaagccagtgacccactcacagcacaagagacaacattgcctctg
agtccaccaaggaacctgaaattttcagatattggacacagcacagcaaaggtgtcgtgg
gagagttcttcaaagaaagtgaaaggttttcgcattatgtacgttaagaccgatggaacc
gaaaccaatgatgtggaggttgaccaaatttcaacataccttctgaaaagcctatcatcc
cttacagaatatactgtggccattttttctatttatgatgaaggtcaatcggaatcactt
actggcacttttactacaaagaaagttcctgtccccaagaatctggagattagtgatata
accacagagagtttcagagcttcctggaaatccatatcatctgatgtagcactgtaccga
ctaaattgggttccgttaagtggtggaaaatcggaagaggtgctcctgaaaagcgacgtg
aactcatatattatcgacggactgtcacataattcagagtacgaagtttcaatgtctgca
atctttgatgatgaaagtgaaagcgatgcagttgctgtccttgcagctacattgctaaag
acaactagtgctgccgtcaccaccaccactacaatcactacaaccacaagatccatgaca
gcagctgttcgaacaggaataagaaatctcgtgatagatgatgaaactacatctagtcta
caaatcaaatggcagatctccgatgccagtgttcgacagttcagggttacctatataggt
gcaaaaggtgatcggggtgtagaatcggtaatggttccaggaagacaaaatagtcttcgc
attcagcctctgctctcagatacggaatacaaagtcacagtcacacctgtctactacagt
ggagaaggagtcgacatttcagcctatggcaaaaccttgcctctttctgctccaagaaac
ttacgggtttcagacgaatggtacaacagagtgcgcatttcctgggatgcccctccgtca
cctacaatgggatacaggattgtatataaacctatcagtgtctctggacctgcactggag
acctttgtgggagatgatattaccaacatgctgattgtgaacctgctgagtgggacagaa
tacagcctcaaagtgtttgcttcatactcgacaggtgtcagtgatgccttaatgggtgtg
gctaagacattggacttggtggtgacgaatctgaatgcgtatcaggtgcgaatgactagc
atgtgtgctcaatgggagcttcataggcatgcaactgcatacaggattattttggaatca
ctattagatgggagaaagaatgaagtgctgctcagtggagggacatcccagcactgtttc
tatgagctgaaacctaacacacagtataaaatcagtgtttattcccagttccaggaagta
gagggaccagctatcggaataatggaaacaacattgccagtcccgactgtagcaccaaca
ccccctccaacaactccaccgccgactacaattcctcctgcaagagaagtttgtaaagcc
gctagagctgatcttgtgtttctggtggatggatcctggagtattggagatgaaaatttc
aacaaaatcattcgatttctgtacagtactgctggagccctggatcagattggtgctgat
ggaactcaagtggcacttgttcagttcagtgatgatgcccggacagagtttaaactcgac
tcattcaaagataaagagtctctccttgaagccatacaacatatacaatataaaggagga
aacacaaaaacaggcaaagccattaagcatgctcgagagtccttgtttacgaataattct
ggcatgagaagaggcatacccaaggttttggtggttattactgatggaagatcacaggat
gatgtgaataatatctccagagatatgcaactagatggttttagtatatttgctattgga
gtggcggatgcagactatgcagaactggtgaacattggcagcaagcccattgagcggcac
gtcttctttgtggatgactttgacgcctttaagaagatagaagacgaactgatcactttc
atctgtgaaacggcatcagcaatgtgcccattgtcgatgatgcatggcaacagtttagca
ggatttaaaatgatggagatgtttggtttgattgagaaagaattctcagcaatagaagga
gtttctatggatcctgggaccttcaatagctttccctgttaccgactacataaggacgcc
ctagtgtctcagcctacaaagtatattcatcccgagggactgccctccgactacacgatt
acattcctctttcgagtactgccagatactccacaggaaccgtttgccttatgggaaatt
ttaaataaagagtttgagccactggttggaatcattttagataatggtgggaaaactttg
acattctttaactatgattacaaaggagaatttcagccggttacatttgagggacctgaa
atcagaaaaatattttatggaagttttcataagttacatgtagtcatcagcaagacttct
tccagactaattatagactgcaaacaagtgggcgaaaaggcaattaacacagcaggtaat
attacctccgatgggatagaagtgctggggaggatggtcagatcgagaggaccaagggat
aattctgcaccattccagttacagatgttcgacattgtctgtacaacatcctgggccaat
agagacaaatgctgtgaacttccaggcttgagggatgaagaaaactgcccagcttttcca
cacgactgtgactgtgcgcaggatggcaaagggccatcaggaccccctggaccaccgggt
ggcccaggaatcaggggtgcaaaaggtcaacgaggagaatcagggtctttgggacctgtg
gggcctcgtggagagcatggctctactgggcctcagggacctcctgggccacaaggccca
agtggactttcaattcaaggaccatctggttcaccaggtgaaaaaggagataaaggggat
tctggtaattctggacaacagggtgtgcctggagtgtctggatcaccggggcgagatggg
attcaaggtccacggggagttccaggaaacgatggatctatcggaccacagggttcacct
gggtccattgggagtcctggttccccaggctcaccaggtgttccaggagtcaaaggaccc
caaggtgacagtgggcctgtgggttttcctggttccaaaggagaaagaggtgaaagaggt
gatacccagtctcaaactatggtgcgtgcaattgctcgtcaagtatgtgaacagcttatc
caaagtcacttggccaggtataattctatgctgaatcaaattccaagtcagtctacatct
gtgcgaactgtttcggggccaccgggtgagccaggtcgacagggaccccctggtccacag
ggagatcaaggaccagcaggaagaacaggatttccaggcaatccaggccaggcaggcaca
cacggagacagaggtttaccaggtgaaaaaggagaacgaggaaatccaggagtcggagct
caaggatcaagaggaccaccaggacccacaggaactccaggagaaagtcgagctggcagc
cagggacctcctggtcctccagggcctcgaggtcaacctggtcatacaggcacaagtggt
ccacagggtcagcaaggccaacctggatattgtgatccttcttcttgcgctggttatggt
gccgtgggtggatacagtgagccaacagatcaagatatccctgtagtacagttaccacat
aacacctaccaaatatatgatcccgaagacctttatgatggagaccaagagagttatata
attcatggatcctacccccgtccagccccatatccccaaccctcctatccagatcctggt
cctgtacaaccagagtttacccctgtgcaagaagagagagaagcctttgaaataagatcg
ccaggaatgaaccgcgtctcgcgggacacgtcaagaaaacgtgctgtatattcactgcta
aagaggaagaagacaaaagactcttga
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