Geotrypetes seraphini (Gaboon caecilian): 117355194
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Entry
117355194 CDS
T09159
Symbol
VCPIP1
Name
(RefSeq) deubiquitinating protein VCIP135
KO
K11861
deubiquitinating protein VCIP135 [EC:
3.4.19.12
]
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gsh01002
]
117355194 (VCPIP1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gsh04121
]
117355194 (VCPIP1)
Enzymes [BR:
gsh01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
117355194 (VCPIP1)
Peptidases and inhibitors [BR:
gsh01002
]
Cysteine peptidases
Family C64
117355194 (VCPIP1)
Ubiquitin system [BR:
gsh04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
117355194 (VCPIP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VCIP135_N
OTU
OTU1_UBXL
ubiquitin
Motif
Other DBs
NCBI-GeneID:
117355194
NCBI-ProteinID:
XP_033789255
UniProt:
A0A6P8Q2Q8
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All DBs
Position
2:104787260..104859733
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AA seq
1196 aa
AA seq
DB search
MSQQPASKRKDRRILSGTCPDPSCQARLFFPAHGAASIECTDCGRRHEQRSLLGVEEVTD
PDVVLHNLLRSALLGMTGAPKRSGELVKVMGLSNYHCKLLAPILARYGMDKQTGKAKLLK
EMNQGDLFDCALLGDRAFLIEPEHVNTVGYGKDRSGSLIYLHDTLEDIKKANNNQECFIP
VHVDGDGHCLVHAVSRALVGRELFWHALRENLKRHFKENLSRYKALFHDFIDADEWEDII
NECDPLFVPPEGVPLGLRNIHIFGLANVLHRPIILLDSLSGMRSSGDYSATFLPGLIPSE
KCRGKDGHLNKPICIAWSSSGRNHYIPLVGIKGISLPKLPVKLLPKAWGVPQDLIKTYVR
LEEDGSCIIGGDRGLQDKYLMRLVAAMEEVFMNKYGIHPSLVADMHQYCYRRTGVIGVQP
EEVTAAAKKAVMENRLHKCLVCGALSEIHVPSEWLVPGGKLYNLAKSTHGQLRPDKNYSF
PLNNLVCSYDATKDVLVPDYSLSNLTACNWCHGTSVRRVKNDASIVYLDGDRTNTRSTGG
KCGCGFKHYWEGKEYDNLPEAFPITLEWGGRVVRETVYWFQYESDGSLNSNVYDVSMKLV
TKHFPGEFGSEILVQKVVNTILHQTAKKNPGDYTPVNIDGAHAQRVDDIKPGQDTEVHPP
TKIILTGQKGKTLHKEELNMSKTERTIQQNISEQASLLQKRKTEKLKQEQKDLQQRSVSP
SIVRDGSSSAPPTPTKVLYYPTSAKEKKIRITTYDGRQAMLTLKSSTTFFELQESIAREF
TIPPSLQCIRFGFPPKELLPPKEGMENEPVPLQHGDRITIEIQKGKEEPNQPTSAYSAHE
VKPEDVTVINKNSSKELQEQIDKEMYSLCLLATLMGEDVWSYARGLPHLFQQGGVFYNMM
KKNMGLVDGKHCTFPYLPGKTFVYNASEDRLELCADAAGHFPIGPEVEDMIKEALSQVRA
EASSRSKEASPSHGVLKLGSGGVVKKKSEQSHNVTAFQGKGHSLGTASSSLHIDQRPKDT
PLSRKHSMGSDFSTGSKKSEPSLFTASPGDSELIRVAPGVVTMRDSRQLDPNLVEAQRKK
LQEMVSSIQASMDKHLRDQHVEQSAATEPATRKVEIAGPSVLCGGVSQIGLPETVSLTSG
SVLLNAESSVGNLANAVETTFPSGSKEKQGVSIEESDEMDSQDAEIMNTAEPMDHS
NT seq
3591 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagcagccggcctccaagcgtaaggaccggcgcatcctgtcgggcacctgcccg
gacccgagctgccaggcgcgactcttcttcccggcgcacggcgcggccagcatcgagtgc
accgactgtggccggcggcacgagcagcgcagcttgctgggcgtggaggaggtgacggac
ccggacgtggtgctgcacaacctgctgcggagcgccctacttggtatgacgggcgccccc
aagcggagtggcgaactggtgaaagtcatgggtctctccaactaccactgcaagctgctg
gcccctatcctggcccgctatggtatggacaaacagacgggcaaggccaagttattgaag
gagatgaaccagggtgatctctttgactgtgctcttctgggtgaccgggccttcctcatc
gagcctgagcacgttaacactgtgggttatggcaaggaccgctctggtagcctcatctac
ttgcatgatacactggaagacatcaagaaggccaacaacaaccaggaatgctttatccct
gtccatgttgatggggatggccactgtctggtgcatgctgtgtctagggccttggtgggc
agggagctgttttggcatgccttgcgggaaaatctgaaaagacatttcaaggaaaatctt
agcagatacaaagcactgtttcatgacttcattgatgcagatgaatgggaggatatcatc
aatgagtgtgaccccttgtttgtcccacctgagggtgtacccttggggctcagaaacatt
catatttttggtttggcaaatgtcctgcatcgcccaataatcttgttagattcattgagt
ggaatgagaagttcaggtgattattcagctacttttcttccaggacttataccttcagaa
aaatgcagaggaaaagatgggcatttgaacaagcctatctgtattgcatggagtagttct
ggacgtaaccattacattcctctggttggcataaaaggtatctctttgcccaaactacca
gtgaaattactccccaaagcctggggggttccacaagatctgattaagacatatgtcaga
ttggaagaggatggtagctgtataattggaggtgacagaggtttgcaagacaagtattta
atgagacttgttgcagctatggaagaagtttttatgaataagtatggtatacatcctagt
cttgtagctgatatgcatcagtactgctacaggaggactggtgtaataggagttcaacct
gaagaagtgactgctgctgccaaaaaggcagtaatggagaatcgccttcataagtgtttg
gtctgtggtgccctttcagaaattcatgttccttctgaatggttagtgcctggaggaaaa
ctctataatttggcaaaatccactcatgggcagttaagacctgacaagaattacagcttt
cctcttaacaacttggtgtgctcttatgatgccacaaaggatgtccttgttccagattat
agtctgagtaatctgactgcttgtaactggtgccatggtacttcagtacgccgggtcaaa
aatgatgcatccattgtatatttagatggagaccgaactaatactaggtccactggtgga
aaatgtggttgtggattcaaacattattgggaaggtaaagaatatgacaatcttccagaa
gctttccctattacattggaatggggaggtagagtggtaagagaaactgtgtattggttc
cagtatgaaagtgatggctctttgaacagcaatgtatatgatgtttcaatgaaacttgtt
accaagcattttcctggtgagtttggtagtgaaattctagttcagaaagttgttaataca
atattgcatcagactgccaaaaaaaatcctggtgattatacccctgttaatattgatggt
gctcatgctcagagagttgatgatattaaacctgggcaagacactgaggtgcatcctcct
acaaaaattattcttacaggacagaaagggaaaaccttgcacaaagaggagttaaatatg
agcaaaacggaaagaactattcaacagaacatttcagaacaagcttccctgttacagaaa
cggaagactgagaagctgaaacaagaacagaaagatctgcaacagagatctgtgtcccct
agcatagttcgagatggctcctcatctgcacctcctacacctacaaaggtgctttattac
cccacatctgcaaaagaaaaaaagatccgtataactacttatgatgggcgacaagcaatg
cttaccctgaagtcttcaacaactttttttgaattgcaagaaagcattgccagagaattt
actatccctccatctttacagtgtatacgctttggtttccctcctaaagagcttctgcca
cccaaggaaggaatggaaaatgagcctgttcccttacaacatggtgatagaattactata
gaaatacagaaggggaaagaggaacctaaccagcctacatcagcctattctgcccatgaa
gttaaacctgaagatgttactgtaattaacaaaaactcttcaaaagaactgcaagagcag
attgacaaagaaatgtactccttgtgtcttctggctacactaatgggagaagatgtgtgg
tcttatgcaagggggcttcctcatctgttccagcagggaggcgtattctacaatatgatg
aagaaaaacatgggtctggttgatggaaaacattgcaccttcccatatctacctggtaaa
acctttgtttataatgcatcagaagacagattggagctgtgtgcagatgctgcaggccat
ttccctattggtcctgaagtagaagacatgattaaagaggcactgagtcaagtccgagct
gaagcatcttcaagaagcaaggaggctagcccttcacatggagtcctgaaactagggagt
ggtggagttgtgaaaaagaagtctgaacagtcacataatgtaacagcatttcaagggaag
gggcactcattgggaactgcatcaagcagcctgcacattgatcaaagacctaaagatacc
ccacttagtagaaaacatagtatggggtcagatttcagtactggttccaaaaaatctgaa
ccatctttattcacagctagccctggtgacagtgagcttatcagagtagctcctggagtg
gttacgatgagagacagcagacaacttgaccccaacttagtggaagctcagcgtaaaaaa
ttgcaagaaatggtttcttcaattcaggcttcaatggataaacacttgcgggatcagcac
gtagagcagtctgcagcaactgaaccagctacaagaaaagtagaaattgcagggccctct
gttttgtgtggtggagtgagtcagataggtttgccagagactgtatctttgactagtggc
agtgtgctgctgaatgcagaatcaagtgttggtaacctggcaaatgcagtagagaccacg
ttcccctcagggtctaaagaaaagcagggagtttctattgaagaatctgacgagatggat
agtcaagatgcagagattatgaatacagcagagcccatggatcactcttga
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integrated database retrieval system
