Geotrypetes seraphini (Gaboon caecilian): 117355208
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Entry
117355208 CDS
T09159
Symbol
NBN
Name
(RefSeq) nibrin isoform X1
KO
K10867
nibrin
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh03440
Homologous recombination
gsh04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
117355208 (NBN)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
117355208 (NBN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gsh03032
]
117355208 (NBN)
03400 DNA repair and recombination proteins [BR:
gsh03400
]
117355208 (NBN)
DNA replication proteins [BR:
gsh03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
117355208 (NBN)
DNA repair and recombination proteins [BR:
gsh03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
117355208 (NBN)
BRCA1-C complex
117355208 (NBN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nbs1_C
NIBRIN_BRCT_II
FHA
Yop-YscD_cpl
RTT107_BRCT_5
BRCT
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
117355208
NCBI-ProteinID:
XP_033789291
UniProt:
A0A6P8QRT4
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All DBs
Position
2:81688144..81774737
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AA seq
751 aa
AA seq
DB search
MWKLQGVSGATVGEPQRLLTGVEYIVGRKNCEILILDDQSISRAHAALSASHSTANLTQG
AAVPTLTIKDLSKYGTFVNEQKLQANSPKSLNSGDRVTFGVFNSKFRVEYEPLVVCSSCL
DVSGKTALNQAILQLGGHAMNNWTEDCTHLVMTSVKVTVKTICALICCRPIVKPDYFTEF
AKAIHSKQTLPKFESFYPPINEPAISSETLDLSGHQERRNIFRGKVVLFLNTKQYKKLSP
AIVLGGGEVKLLAEGSKETSLLECVGACVIDVGFAASESSVSEATRKWTDTVMALLQRKG
HRAIPEEEIGLAVIFMSTDTYCNPQIQGGVESSVTSRPAISGPTLSQSIAVDETIMPGAS
QNITAYVADTEALEQPETWMDTTGVQEVKETPKSRQKSKVNTQTVSTVKETFSSSHTVSS
GTQCFKKDSKAGSQKSYQQSLTKLWGVDKSEDKASQHQSNVIKNYFPTITKKRERDKEGE
EIPLPKLVKMDKQSAAPLNQSQLVTAAVRENSMQQNSNNASIIVSESNLPSTDTHLKIEL
GNSKAKNNEIITKNISSKKPEVKKRKELDDFCEEDDIVELVFESREPEWEFTMDDQAQED
RSNTSKKRRLDSEINMNKGEVKDIQIKEENKTAFSFEKLQEDSDILPSKLLVTEFRSLVV
SRSTQYSQSAIRTENQHVKNFKKFKKVAFPGAVGLPHIIGGSDLIAHHTQKNSELEQWLR
QEMEEQSQRAREESLADDLFRYDPKSLRRRR
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atgtggaagttgcaaggagtgagcggcgctacggttggtgagccccaacgtttattgacg
ggtgttgagtatattgttggacgcaagaattgtgagatcttgatcctggatgatcagtct
attagccgagcccatgcagcactctctgctagccactcaactgctaacttgactcaagga
gctgcagtccctactttaacaataaaagacttgtcaaaatatggcacatttgttaatgaa
cagaaactgcaagctaattctccaaaatctttaaattctggagaccgagtcacttttgga
gtcttcaatagcaaatttagggtggaatatgaacctttggttgtctgctcctcttgttta
gacgtttcagggaagactgctttaaatcaagccattctgcagctcggaggacatgcaatg
aataactggacagaggattgtactcacctagtcatgacttctgtgaaagttactgttaag
acaatatgtgctttgatttgctgtcgaccaattgtaaagccagattattttacagaattt
gccaaagccattcattctaaacaaactttacccaaatttgaaagtttttatcctcccatt
aatgagcctgctatcagctctgaaactttagatctttctggtcatcaggaaagacgaaac
attttcagaggaaaagttgtcttatttctaaatactaaacagtataaaaagctgagtcca
gcaattgttcttggagggggagaagtaaagttgctagctgaaggaagtaaagaaacatct
ctactggaatgcgtgggagcctgtgttattgatgtgggatttgcagcctcagaatcctca
gtgtctgaagcaacacggaaatggactgatacagtaatggctttactacagaggaaaggt
cacagggctattccggaagaagaaattggactagcagttatcttcatgtccacagacaca
tactgcaaccctcaaatccaaggtggtgtagagtcctctgtgacttcaagaccagccata
tctgggccaacgctttctcagagcatagctgtagatgagaccataatgccaggagcctct
cagaatatcacagcatatgtggctgatacagaagctctggagcagcctgaaacatggatg
gatacaactggtgttcaagaagttaaagaaacacctaaatcgaggcaaaagagcaaagtg
aatacacagactgtatctactgtaaaggagactttcagtagctctcataccgtaagttca
gggacgcaatgtttcaaaaaggacagcaaggctggaagtcaaaaaagctaccaacagtca
ctcacaaaattatggggagttgataaaagtgaagacaaagcttcacaacaccagtccaat
gtcatcaaaaactacttcccaacaattaccaagaaaagggaaagggataaagaaggagaa
gaaatacctttacctaaattagtcaagatggacaagcagtcagcagcacctttaaatcag
agtcaacttgtaacagcagcagtaagggaaaacagtatgcagcaaaattctaataatgct
tctattatagtttctgagtcaaacttgccttccacagacacacatttaaaaattgaactt
ggaaacagcaaagcaaagaataatgaaattataactaaaaatatctcaagtaaaaagcca
gaagtaaaaaagagaaaagaattggacgatttttgtgaagaagatgatatagtagagctt
gtatttgagagcagagaaccagaatgggaatttacaatggacgatcaggcacaggaagat
aggagcaacacaagtaaaaaaagaaggttggattcagaaataaacatgaataaaggagaa
gtaaaagatatacaaataaaagaagaaaacaagactgcatttagctttgaaaaacttcaa
gaagattcggatattcttcccagcaaacttttggtgactgagtttaggtcacttgttgta
agccgttccacacaatatagtcagtcagccataagaacagaaaatcagcatgtcaaaaac
tttaaaaaatttaaaaaggtggctttccctggagctgtaggacttccacatattattggt
gggtcagatttgatagctcatcacacacaaaaaaattcagagttggaacagtggttgcgt
caggaaatggaggagcaaagtcagcgggcaagagaagagtcactagcagatgatcttttt
aggtatgatcctaaatctctcagaaggagaagataa
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