Geotrypetes seraphini (Gaboon caecilian): 117355221
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Entry
117355221 CDS
T09159
Symbol
CHD7
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 7 isoform X1
KO
K14437
chromodomain-helicase-DNA-binding protein 7 [EC:5.6.2.-]
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gsh03036
]
117355221 (CHD7)
Chromosome and associated proteins [BR:
gsh03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
117355221 (CHD7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
DEAD
HTH_CHD1_Hrp3
CHDCT2
HDA2-3
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
117355221
NCBI-ProteinID:
XP_033789338
UniProt:
A0A6P8QPA3
LinkDB
All DBs
Position
2:complement(111056093..111672634)
Genome browser
AA seq
2975 aa
AA seq
DB search
MADPGMMSLFGEDGNIFSEGLDGLGECGYPENAVNPMGQQMPMDQGFGSLQSPLHHTPTN
QNQAKLTHFDHYNQYEPQKMHLMDQPSRMMTNAPGNGIASPHSQYHSPSVPHGGGQMGVY
PGMQNERHGQPFVDSGSLWGSRAVQVSDQVRAPYQQQPSAPSGPPGSGHPQHIQQMGNYM
ARGDFSMQQHSQSQQQRMNQFSQGQENLNQGNPFLGTSGPGHLSHVPQQNPSIGSSLRHS
VQQFHHHPSSTLHGEPVAHNPRFSPNPPQQGAVRPQTINFNSRTQAVPSPTINNSGQYSR
YPYSSNLNQGLVNNTGMNQNLGLTNSTPINPSVPRYPNAVGFPSNSGQGLMHQQPMHPSG
SLNQMNTQTMHPSQPQGTYASPPPMSPLKAMNNPAGTPPPQVRPGSAGIPLEVGNYPNIP
HPQPPHQTPGNMGIGQRNMGPRSMQQSQPFLGMSSTPREMGGHMRPNGCPGVGHADPQAI
QERLIPGQQHPGQQTSFQLATCTPLQPHPTIHHQSSPPPHSHHQPWTQLHQSPQNTPQKV
PVHQHSPSETFLDKPVPDLTRVSGPNAPLLKSEDFLLSTEKQPPQKKKKKKNNHIAVEGS
SKGFGQEGFPSVPDKQEFSGSLLDCSLEGKKKKKKAKTKEPRESKEPKEKEPKAPRAPKV
PKEPKEKKAKLTTPKSKSSKKIGNKPDLETSALKKKANKGKLEGSEHSDLEKTPPVSPEE
EDDQGIQKRRSSRQVKRKRYTEDLEFKISDEEADDADAVGRESPSNMSQSEQQEAIDAEG
PVVEKIISSRMTKKQMESGEEAEVEEFYVKYKNFSFLHCHWATVEELGKDKRIHQKIKRY
KAKQGQNKFLSEIEDELFNPDYVEVDRILDVAQSTDDNGEPVTHYLVKWCSLPYEDSTWE
LKQDIDQVKIEEFENLKSREPATQHVERPPADEWKKSESSREYKNNNKLREYQLEGVNWL
LFNWYNTRNCILADEMGLGKTIQSITFLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWT
ELNVVVYHGSQASRRTIQTYEMYFKDSQGRPIKGSYKFHSIITTFEMILTDCPELRNIPW
RCVVIDEAHRLKNRNCKLLEGLKMMGLEHKVLLTGTPLQNTVEELFSLLNFLEPGRFPSE
STFMQEFGDLKTEEQVQKLQGILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYR
AILEKNFAFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKEMHNTDLPD
FQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLVQRRYPYERIDGR
VRGNLRQAAIDRFSRPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQAR
CHRIGQSKAVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENATNGVQQLSKKE
IEDLLRKGAYGALMDEEDEGSKFCEEDIDQILLRRTHTITIESEGKGSTFAKASFVSSGN
RTDISLDDPNFWQKWAKKAELDIDALNGRNNLVIDTPRVRKQTRLYSAVKEDELMEFSDL
ESDSEEKPSIKPRRPQDKSQGYARSECFRVEKNLLVYGWGRWTDILSHGRFKRQLTEQDV
ETICRAILVYCLNHYKGDENIKRFIWDLITPTEDGQTRALLNHSGLSAPVPRGRKGKKVK
IQSAQPMLQHADWLTSCNPDTLFQEDSYKKHLKHHCNKVLLRVRMLYYLRQEVIGDQAER
ILEGADSSEVDIWIPEPFHAEVPTAWWDREADKSLLIGIFKHGYEKYNSIRADPTLCFLE
RAGMPDAKAIAAEQRGTDILADGGDGGEFDREDEDPEYKPARITFKDEIDEFANSPLEDK
EEVMEMDVSGKQSDSAEIGQLYWPNTSTLTTRLRRLITAYQRSYKRQQMRQEALMKTDRR
RRRPREEVRALEAEREAIITEKRQKWTRREEADFYRVVSTFGVIVDPVSQHFDWNQFRAF
ARLDKKSDESLEKYFNCFVTMCKQVCCMSTKRDEEFSDLSTMIEPITEERASRTLYRIEL
LRKIREQVLRHPQLAERLKLCQASLDLPEWWESGKHDRDLLIGAAKHGVSRTDYHILNDP
DLCFLDAHKSFAQNRGAAQHGSVPLLNPSGPVCSPTPVVPLASIQEEKTIEQEETMTQQS
EDLEVKEKLKEEEGKERNISEKIKQESKHEVVALKSETQDVVMTPDPGPKYLSEKGSEED
DEDRLDDDDKSEESSQAEAGTVSQGKNFDEESNASLSTARDETRDGFYLEDGDQSLAQML
HERTFAFSFWPKDRVMINRLDNICETVLKGKWPINRRQMFDFQGLIPGYTPATVDSPLPK
RSFAELSLVGQGNFSGSEDITASPQLSKENALTLTVPRQRRRRRRKIEIEAERAAKRRNL
MEMVAQLRESQVVSENGQEKVVDLSKASREVTSSTSNFISVTPKFILPNVSTPVSDAFKT
QMELLQAGLSRTPTRHLLNGSLIDGEPPMKRRRGRRKNVEGLDVLFMSNKRISLTTEDAE
VTKAFEDDLETPPTRNIPSPGQLDPDTRIPVINLEDRTRLVGEEAPKNKDLVEWLKLHPS
YTIDMPSYVPKSADVLFSPFQKPKQKRHRCRNPNKLDINTLTGEERVPVVNKRNGKKMGG
AMAPPMKDLPRWLEENPEYAVAPDWTDIVKQSGFVPESMFDRLLTGPVVREEGASRRGRR
PKSEIAKAAAAAAAAAAAASTSGINPLLMNSLFAGMDLASLQNLQNLQSLQLAGLMGFPP
GLTTAAAAGGDSKNPAAMLPLMLPGMAGLPSMFGLGSLLNNPLTAAAGNATTASSQGETE
DGTSKLDEKRNENETKDSEQSTDTVSATDSASGSITAATGLPTNPLAFNPFLLSTMAPGL
FYPSMFLPPGLGGLTLPGFPALAGLQNAMGSGEEKVADKAEQSSLKEEETVEGSDAEESL
DKTADSSILEDEIAQGEELDSLNGGDEIDNNENDE
NT seq
8928 nt
NT seq
+upstream
nt +downstream
nt
atggcagatccgggaatgatgagcttgtttggtgaagatggaaatattttcagtgagggg
cttgatggtcttggagaatgtggctatcctgaaaatgcagtaaatcctatgggacaacaa
atgcccatggatcaaggatttggttctttacagtcgcctctgcatcatacccctacaaat
cagaatcaagcaaagctgacccattttgatcattataaccaatatgaacctcagaaaatg
catttgatggatcagcctagcagaatgatgacaaatgcccctgggaatggcatagcatct
ccacactctcagtatcacagcccatcagttccccatggtggtggtcagatgggagtatat
cctggcatgcagaatgaaaggcatggacaaccgtttgtggacagtggttctctgtgggga
tcgagggctgtgcaggtgtcggaccaagtgagggctccttatcagcagcagccatcagca
ccctctggtcccccaggttcaggccacccccagcacattcaacagatgggaaattacatg
gctcgtggagatttttcaatgcagcagcatagtcagtcacagcagcagagaatgaaccaa
ttttctcaaggtcaagagaatcttaatcagggaaatccatttcttggcacctcaggacca
ggccacttgtctcatgtgccccagcaaaatcccagcattggatcttctctgcgtcattct
gtccagcaatttcatcaccacccctcctccactcttcatggggaacctgttgcccacaac
cctagattttccccaaatcctcctcagcagggtgctgttaggccacagaccattaatttt
aattctcggacccaggcagtaccctcacctactataaacaactcagggcagtattcgcgg
tatccttacagtagtaacctgaatcagggattagttaacaatacagggatgaatcagaat
ttaggccttactaatagtacccccataaatccatcagtacctagatacccaaatgctgta
ggatttccttcaaacagtggtcaaggactaatgcaccagcagcccatgcatcccagtggc
tcacttaaccaaatgaacacacaaactatgcatccttcacagcctcagggaacctatgcc
tctccacctcccatgtcacctttgaaagcaatgaataatccagcaggcaccccccctcca
caagttaggcctggtagtgctggaataccattagaggttggaaattacccaaatataccc
catcctcagcctccacaccagacccctgggaacatggggattggacagaggaatatgggc
cctagaagcatgcaacagtctcagccattcttaggcatgtcttcaacaccaagggagatg
ggtgggcatatgagaccaaatggttgtcctggcgttggccatgcagatccacaggcaata
caagagcgacttatacctggccagcagcaccctggtcagcagacatcttttcagctggca
acttgtactcctttgcagcctcatcctacaatacatcaccagtcttcaccaccaccacat
tctcatcatcagccatggacacaacttcaccagtcaccccaaaacacacctcagaaagtg
cctgtccatcagcattctccgtcagaaacttttctagacaaaccagtgccggatctgacc
agagttagtggtccaaatgccccactattgaaaagtgaagattttctgctttcaacggag
aaacagccacctcagaaaaaaaagaagaagaaaaacaatcatattgctgtagagggtagc
agcaaagggtttggtcaggagggttttcctagtgttccagacaaacaagagttttctggc
agtttattggattgttccttggaagggaaaaagaagaaaaagaaagcaaagacaaaagag
cccagggagtcaaaagaacccaaggagaaggagccaaaggctcctagagcccctaaggtc
cccaaagagccgaaggaaaagaaagcaaaactcacaacaccaaaatccaagagcagcaaa
aagattggtaataagcctgatttggaaacaagtgctttgaagaaaaaggctaacaaaggg
aaattggaaggttctgaacattcagatttagagaagaccccaccagtttctcccgaagag
gaagatgatcagggaattcagaagagacgctccagcaggcaggttaagagaaagcgctac
actgaagatttggagttcaagatttctgatgaggaagcagatgatgcagatgctgttgga
agagaatctccttcaaatatgtcacagtcagagcagcaggaagcaattgatgctgaaggc
cctgttgtcgagaaaatcattagtagccgtatgaccaagaaacagatggagtctggagaa
gaagcggaagtagaggagttctatgtaaaatacaaaaacttctcttttcttcattgtcac
tgggcaactgtagaagaattggggaaggacaagagaatacatcaaaagattaaacgatac
aaagcaaagcagggtcaaaacaaattcctttcagagattgaagatgagctctttaatcct
gattatgtggaagttgatcgaattctggatgttgctcagagcactgatgataatggtgag
cctgtgactcattatttggtaaaatggtgctcacttccctatgaagacagcacttgggaa
ctgaagcaagatatagatcaagttaagattgaagaatttgagaatctgaagtctagagaa
ccagcaacgcaacatgtggaacgacctcctgctgatgagtggaagaaatcagagagttcc
agggagtataaaaacaataacaaactcagggaataccagttggagggagtgaactggctt
ctattcaattggtacaacacgcgcaactgcattttggcagatgaaatgggattaggaaaa
actatccagtccattacatttctctatgagatatatttgaagggaatccatggtcctttt
ctggtaattgctcctctgtccacaattccaaactgggaaagagaattccgcacttggacc
gagttgaatgtggttgtgtatcatgggagtcaagctagccgtcggaccattcaaacatat
gaaatgtacttcaaagattcacaggggcgtccgataaaggggtcctacaagttccattcc
atcatcactacgtttgaaatgattttgacagactgccctgaactgcgtaacattccatgg
cgttgtgtggtgattgatgaggcacataggctgaagaatcgcaactgcaagctgctggag
gggcttaaaatgatgggcttggaacacaaagtactgttgactggtacccctttacagaac
accgtagaagagctttttagtttgcttaatttcttggaaccaggccgcttcccttcagaa
agtaccttcatgcaagagtttggtgatctgaaaacagaagaacaggtacaaaagctccaa
ggcattctaaagccaatgatgctgagacgcctgaaagaagatgtagaaaagaatctggcc
ccaaaagaagaaaccattatcgaggtggagctcacgaatattcaaaagaaatattatcgt
gctatcctggagaagaactttgcattcctctccaaaggtggtggccaagctaatgtacct
aaccttttgaatactatgatggaactaagaaagtgctgtaatcatccatacttgataaat
ggtgctgaagagaaaattttggaagagttcaaagaaatgcacaacacagatcttccagat
tttcagctccaggctatgattcaggctgctggcaagcttgtgctgattgacaagctgctg
cccaaattaaaggctggtgggcacagggtacttatcttctcacagatggtgcggtgtttg
gacatcttggaagactaccttgttcaaagaaggtacccatatgaacgcattgatggcaga
gtaaggggcaatcttcgtcaggcagctattgacagattctcaagaccagattcggataga
tttgtcttcctactatgtacaagggcgggaggcttgggcattaatcttactgctgctgat
acctgcattatctttgattcagattggaacccccaaaatgaccttcaggctcaagctcga
tgtcatagaataggacagagcaaagcagtgaaaatctacaggctgataaccaggaattct
tatgaaagggaaatgtttgacaaggctagcttaaagcttggtctggataaagctgtgctg
cagtccatgagtggaagagagaatgctacaaatggggtacagcagctttccaagaaagaa
atagaagatcttctacgaaaaggagcctatggtgctcttatggatgaagaagatgaaggg
tccaaattttgtgaagaggacattgatcagattcttctaagacggactcacaccattact
atagagtctgaagggaagggttcaacttttgctaaggccagctttgtttcatctggaaac
agaactgacatttccctggatgacccaaatttctggcaaaagtgggctaagaaggcagag
ttggacattgatgctttaaatggcaggaataacctggttattgacacaccacgggtaaga
aagcagaccagactctacagtgctgtgaaggaggatgagctgatggaattttctgatctg
gaaagtgactcagaggaaaaaccaagtatcaagccacgtcgcccccaagacaaatcacag
ggctatgcaaggagcgagtgcttcagggttgaaaaaaacctattagtttatggctggggt
cgatggacagacatactctctcatgggcgcttcaaacggcaactaactgaacaggatgta
gaaaccatctgtcgtgccatcctggtttactgtctgaaccattacaaaggggatgaaaat
atcaaacgtttcatctgggatctcatcacaccaacagaagacgggcagacacgtgccttg
cttaaccactcaggactctctgctccagtgccccgggggagaaaaggaaagaaggtgaaa
atacagagtgctcagcccatgctgcaacatgcagactggctgacaagctgcaacccagac
accttattccaagaagacagctacaagaaacacctcaaacatcactgtaacaaggtcctg
ctgcgtgtccgcatgctgtattacctaagacaagaagtcataggggaccaggcagaaaga
atcttagagggtgccgactcaagtgaggtggatatttggatacccgaaccttttcatgct
gaggttcctacggcctggtgggacagagaagcagataaatcccttttaattggcatcttt
aaacatggttatgagaagtacaattctatcagagctgaccctaccttgtgttttttggaa
agggctggaatgcctgatgcgaaggctatagcagctgagcagaggggaacagatattcta
gcagatggtggtgatgggggagaatttgatcgggaagatgaagatccagaatataagcca
gccagaatcacatttaaagatgaaattgatgaatttgcaaactctccactagaagataaa
gaggaggtcatggaaatggatgtctcaggcaagcagagtgatagtgctgagataggacaa
ctctattggcctaacacttcaacactgacaactcgtctacgccgacttattactgcttac
cagcgcagctataagaggcagcagatgagacaggaagccttaatgaagactgaccggagg
aggagacgacctcgagaggaagttagagcactggaggcagaaagggaagcaataataaca
gaaaagcgccaaaaatggacaaggagagaagaagcagatttttatcgtgtggtatcaaca
tttggggttattgttgatccagttagtcagcattttgactggaatcagttcagagctttt
gctagacttgacaagaaatcagatgagagtttggagaaatatttcaactgttttgtcacc
atgtgcaagcaagtatgctgcatgtcaactaaaagggatgaagaattctctgatctttcc
actatgattgaaccaatcactgaagaacgtgcctctagaaccctataccgcatagagcta
ttacggaagatccgagaacaggttctgcggcaccctcaactagctgagagactaaaactg
tgtcaggcaagcctggatctgccagaatggtgggagagtggcaaacatgacagggacctg
ctgattggtgctgctaaacatggagtcagtagaactgattaccacatccttaatgatcct
gatctctgctttttagatgcacataaaagctttgctcaaaaccgaggtgctgcgcagcat
ggtagtgtgcctttgctaaatccatcaggcccagtctgtagcccaactcctgttgttcca
ttggcatcaattcaggaagaaaaaactatagaacaggaagaaactatgactcagcagtct
gaggatttggaggtaaaagagaaactcaaagaagaggaaggaaaagagagaaatatttca
gaaaaaattaaacaagaaagtaaacatgaagtggttgccttgaaaagtgagacacaagat
gtggtaatgactccagatccaggtccaaaatacctttctgaaaagggttcagaagaggat
gatgaagacagacttgatgatgatgacaaatctgaagagtcatcgcaagctgaagcaggg
actgtttctcaaggtaagaattttgatgaagaaagcaatgcatccttgagcactgcccga
gatgaaacccgtgatggattttacttggaggatggagaccagtcgctagctcagatgctt
catgaaaggactttcgccttttcattttggcccaaggaccgagtaatgatcaaccggtta
gacaacatctgtgaaactgtattgaaaggaaagtggccaataaataggcgccagatgttt
gatttccaagggctcatccctggatatacaccagctactgtggacagtcccttaccgaaa
agaagctttgcagagctctccttagtcggtcaaggcaacttcagtggcagtgaggacatt
actgcatctcctcagttatcaaaggaaaatgcactcactctaacagttccacggcagcgg
aggaggaggagaaggaagattgaaattgaggctgaaagagctgctaagaggaggaatctt
atggagatggttgctcagctgcgagagtctcaggtggtctcagaaaatggacaagaaaaa
gttgtggatttatcaaaagcctctagagaagtaacaagttctacctcaaattttatatct
gttactcccaagtttatcttgcctaatgtttccacaccagtgtcggatgcctttaaaact
caaatggagctgctacaagcaggtctgtctcgcacacccacaaggcatctgctgaatggt
tctttaattgatggagaacctcctatgaagagaaggcgaggaagaaggaaaaatgtagaa
gggcttgatgtgctgttcatgagcaacaaacggatatcattgactacagaggatgctgaa
gtgaccaaagcctttgaagatgatctagagaccccaccaacaagaaacattccatctcct
ggacagctggacccagacacccgcatcccagtaattaatttagaagataggaccaggctt
gtgggagaggaggcccctaaaaacaaggatttagtagaatggcttaaattacatccttct
tacactattgatatgccgagttatgtaccaaagagtgcggatgtgctgttctccccattt
cagaagccgaagcagaaacgacacagatgtcgaaatcctaataaactggatattaacacc
ctgactggtgaggagagggtgccggttgttaataaaagaaatggaaagaagatgggagga
gctatggctcctccaatgaaggaccttccaaggtggctggaggaaaatcctgaatatgct
gtggctccagattggacagatattgtgaagcaatctggttttgttcccgagtccatgttt
gaccgccttctcacaggaccagttgtgagagaagaaggtgcaagcaggagaggaagaagg
ccaaaaagtgaaattgccaaagcagcagcagcagctgctgctgctgctgctgctgcctcc
acttcaggaatcaatccactactgatgaacagcttatttgctggaatggatcttgcaagc
cttcaaaatctccagaatctgcaatctttgcaacttgcaggtctaatgggcttccctccc
ggacttacaacagctgctgctgctggaggcgattctaaaaatccagctgccatgctgcct
cttatgctgccaggtatggcaggattgcccagcatgtttggactaggtagtttgttgaat
aacccactgacagctgctgctggaaatgccactacagcttccagccaaggagaaactgaa
gatggcacttcaaaattggatgagaagagaaatgaaaatgaaactaaagactctgagcaa
agcacagacactgtttctgctactgactctgcaagtggatctattactgctgctactgga
ttgcccacaaaccctctggcctttaatcctttcctactgtccaccatggctccaggcctg
ttctatccatccatgtttctacctccaggactaggaggattgacactgcctggtttccca
gcactagcagggcttcagaatgcaatgggctccggtgaagagaaggttgctgacaaagct
gagcaatcctccctcaaggaggaagagactgtggaaggcagtgatgcagaggaaagcctt
gataaaactgcagattcatccattttagaagatgaaatagcacagggtgaagaattagac
tcacttaatggtggggatgaaatagacaacaatgaaaatgatgaataa
DBGET
integrated database retrieval system
