Geotrypetes seraphini (Gaboon caecilian): 117355317
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Entry
117355317 CDS
T09159
Symbol
RB1CC1
Name
(RefSeq) RB1-inducible coiled-coil protein 1 isoform X1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117355317 (RB1CC1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
gsh01009
]
117355317 (RB1CC1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gsh04131
]
117355317 (RB1CC1)
03029 Mitochondrial biogenesis [BR:
gsh03029
]
117355317 (RB1CC1)
Protein phosphatases and associated proteins [BR:
gsh01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
117355317 (RB1CC1)
Membrane trafficking [BR:
gsh04131
]
Autophagy
Autophagosome formation proteins
ULK complex
117355317 (RB1CC1)
Mitochondrial biogenesis [BR:
gsh03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
117355317 (RB1CC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
Motif
Other DBs
NCBI-GeneID:
117355317
NCBI-ProteinID:
XP_033789562
UniProt:
A0A6P8Q3I5
LinkDB
All DBs
Position
2:120101734..120427524
Genome browser
AA seq
1591 aa
AA seq
DB search
MKLYVFLVNTGTTLTFDTELAVQTVADLKHAIQTKYKIGILHQILVVNGGECMAPDRRVC
SYSAGTDTNPIFLFNKEMILCERPPVISKTTFSAENEMQLKVEESLMMPAVFHTVASRTQ
LAVEMYEVAKKLCSFCEGLVHDEHLQHQGWAAIMANLEDCTHSYQKLLFKFESAYTNYLQ
TIEDIKLKLTNLGAAVSIMAKIPLLECLTRSSYRMSYPEHGGTEIEDTENEKSLEPVLYL
DEPKMEKSLLDSFSKSVDHSTEDSICEHMKENMDFVQNTETSEEHNNKDVPSFNVSLLDW
INVQDRPNDVESLVRKCFDSMSRLDPRIIQQFLTEGRQTVAKLDNQNMKAIKGLEDRLYA
LDQMIASCSRLVNEQKELAQGFLANQKRAENLKDPSVLPDLCLSHANQLMIMLANHRKLL
DIKQKCTTAKQELANNLQVRLKWCCFVMLHADQDGEKLQALFRLLTELLERIKIVEALST
VPQMYCLAVVEVVRRKMFIKHYREWANALVKDGKNLYEAEKAKRETFGKLFRKSFLRNRL
FRGLDSWPSSFCTRKPRRFDSELPDISLTDLQFLQSFCPPEVQLFLRIPLLCDFEPLNQH
ILALHNLVKAAQSLDEMSQTITDLLSEQKASNNQPSPQSVTTPGMENTVGTTAATSSRAP
SSLNLHGPLCPLVSLPAPLEELSPDSIDAHTFDFETIVHPNIEQALKQGSLDLDSLAESP
ESDFMSAVNEFVIEENPASPGVISDPQSPEMMVESLYSSVINAIDNRRMQDTKGCIKEDC
MENASLKAFMEACRVSAQESQFSLRTIKEDLCHFRTLVQKEQCDFTGNIKCVSLEIRNII
EKVKLSIETALKEKHQKQLLTLEVEYERKLKTLHKDRDENEKIINKLKEDLRDLEEIMQN
KDNEFALVKNEKEAFVCLHNEQDQKLIDLENTVKDQNSELLNLKHLREKMLEELKMLHIE
NDEKMRLLREELQSVEQTHLKELEENLLVTHAREFEKIINDHIEKIEKIKRDNQLQIDQL
QESHVAIVHEKEQQMQELRHKVSELSDLRCKLEVELALKEAETDDVKLLLEESKAQQQES
LKSQLVEETESLRQEIRKLNQRIQDNNDDYEVGLAELRALMIIEKDHCISELMNRHEEEI
TFLRAELNKVTSLYQQTLEVEKRLQEQTVEVMSKLEDQVKALDKQKEGEDTALREQKEKY
EAAILKIEEEKEHLLTTQEQDKQLLLQKFSCEKQEAVEIALKEFELQREAIEKKLLEKIQ
QLENQVNQSPSFEPVSGDAASLVSELQEKLREEKQAFLDQLEKQEKRMNEEMQNLKTSLI
AEQQTNFNTVLTRERMKKENIINDLSDKLKMIVQQQERDKDLIETLSEDRARLLEEKKQL
EEEVSKLLSFNLLPSTHPTSASEQCGACALDIPIEMERLALEPTGPEEDRAESAMEASMM
TVHENLHMLSEEKQRIMLLERTLQLKEEENKRLNQRLMSQSMSSVSSRHSEKIAIRDFQV
GDLVLIILDERHDNYVLFTVSPTLYFLHSESLAALDLKPGEYVTGASRRPWVLGKVMEKE
YCQAKKAQNRFKVPLGTKFYRVKAVPWNKKV
NT seq
4776 nt
NT seq
+upstream
nt +downstream
nt
atgaagttatatgtatttctagtcaacactggaactacacttacatttgacacagagctt
gcagtacaaacggtagcagaccttaaacatgctatccagaccaagtataaaattggcatt
ctacaccagatactggttgttaatggaggagagtgtatggcaccagataggagagtctgt
agttacagtgcaggaacggacaccaatccgatatttctgtttaacaaagagatgatcctg
tgtgaacgccctccagttatttccaaaacaactttttcagcagaaaacgaaatgcaatta
aaagttgaagagtcactcatgatgccagctgttttccacactgtagcatctcgtacgcag
cttgctgtggaaatgtatgaagttgccaagaaactttgctcattttgtgaaggtctggtt
catgatgagcatctacagcatcaaggctgggcagccataatggccaacttggaagactgt
acacattcatatcaaaagcttcttttcaaatttgaaagtgcatatacaaattacctgcaa
acaatagaagatattaagctcaaacttacaaacttaggtgcagctgtttctattatggcc
aagatcccactattggagtgcttgacccgaagtagctacagaatgtcctatcctgaacat
ggagggacagaaattgaagatactgagaatgagaagtcacttgaaccggtgctttatttg
gatgaacctaaaatggagaaatctttgttagattcattttccaaatcagtggatcattca
accgaggacagcatatgtgaacatatgaaagagaatatggattttgttcagaatactgaa
acttcagaggagcacaataataaggatgttccttctttcaacgtttctttattagactgg
atcaatgtacaagacagacccaatgatgtggaatctttggtcagaaaatgctttgattct
atgagtcgattggatccaagaatcattcagcagtttttgacagaaggtcgacaaactgtt
gccaagcttgataatcagaacatgaaagctatcaagggacttgaggacaggctttatgca
ctggaccagatgattgctagttgtagcagactggtaaatgaacaaaaagaacttgctcag
ggatttttagccaatcagaagagagctgaaaacttgaaagatccttctgtgctacctgat
ttgtgtttgagtcatgcaaatcaattgatgatcatgttggctaaccacagaaaactattg
gatatcaagcaaaaatgtactactgccaaacaggagcttgcaaataatttacaagtgagg
ttaaaatggtgctgctttgtaatgcttcatgctgaccaagatggagaaaaactacaagcc
ttgtttcgtctcttgacagagctgctagaacgaataaaaatagtagaggcactcagtaca
gtacctcagatgtattgcttggctgttgttgaggttgtgaggagaaagatgttcataaaa
cactatagggagtgggcaaatgctttggtaaaagatgggaaaaatctctatgaagctgaa
aaggcaaaaagggaaactttcggaaaattatttagaaagtcttttttaagaaatcgtcta
tttagaggactcgattcctggccttcatctttttgtacacgaaagccacgcaggtttgat
agtgaacttccagatatctcattaactgacctgcagtttcttcagtccttttgtcctcca
gaggtacaattgttcctcaggattcccctgctttgtgactttgaacctttaaaccaacat
atacttgctctgcataacctagtgaaagcagcacaaagtttggatgaaatgtcacaaacc
attacagatctgctgagtgagcaaaaggcatctaataatcagccatctccacaatctgtt
acaacaccaggaatggaaaatacagtaggaactacagctgctacctcttctagagcacct
tcatcactcaatcttcatggtcccctgtgtcctcttgttagccttcctgctccactagaa
gaattgtcaccagatagtattgatgcccatacctttgattttgaaacaattgttcatcca
aacatagagcaggcacttaagcaggggtctttagacttagactcgcttgcagagagtcca
gagtctgattttatgtcagcagtaaatgagtttgtcatagaagaaaacccagcttcccct
ggtgtaataagtgacccacaaagtccagaaatgatggtggaatcgctgtattcatcagtt
atcaatgctatagataaccgacgtatgcaagacacaaaaggttgtattaaagaggattgt
atggagaatgcatctttgaaagctttcatggaagcatgtagagtttctgctcaggaatcc
cagttcagtttgagaactatcaaagaagacttgtgtcatttcagaacacttgtacaaaaa
gaacagtgtgactttactggtaatataaaatgtgtatcattagaaatcagaaacattatt
gaaaaagtaaaactttctatagagacggcactaaaagaaaaacatcagaaacaattgctg
actttagaagttgaatatgaacgcaaacttaaaacattacataaggatagagatgaaaat
gaaaaaattataaacaaattgaaagaagatttaagagatcttgaagagatcatgcaaaat
aaggataatgaatttgctttggttaagaatgaaaaggaggcatttgtgtgtttacacaac
gaacaagatcagaaattgattgacttggaaaatacagtaaaggatcaaaatagtgaactt
ctgaaccttaaacatttaagagaaaaaatgttagaagaattaaaaatgcttcatattgaa
aatgatgagaaaatgagacttctgagagaagagcttcagagtgtagaacaaactcattta
aaagaactagaagagaatctactagtcacacatgcacgagaatttgaaaaaataataaat
gatcacattgaaaagatagagaaaataaagagagacaatcagctacaaattgaccagttg
caggaatctcatgttgcaattgttcatgaaaaagagcagcagatgcaagagctaagacat
aaagtttctgaactttctgatttgagatgtaaattagaggttgaactggcactaaaagaa
gcagaaacagatgatgttaaactgctgctggaggaaagtaaagcccaacaacaagaaagc
ttaaaatctcagcttgttgaagaaactgagagtttaagacaggaaataagaaaattaaat
cagaggattcaagataataatgatgattatgaagtgggcttagcagagctaagagcatta
atgataattgaaaaagaccactgcatttcagaattaatgaataggcatgaagaggaaata
acttttcttagagctgaattaaacaaggtaacttcattatatcaacaaacattagaagta
gagaaaagactacaagagcaaacagttgaagtaatgagcaagttagaggatcaagtgaaa
gcacttgacaaacaaaaggaaggggaagatactgcactccgggaacagaaagaaaaatat
gaagctgctatccttaaaattgaggaggaaaaagagcacctattgactactcaagaacaa
gacaaacagctgcttcttcaaaagttcagttgtgaaaaacaggaagcagttgaaattgcc
ctcaaagagtttgaattacagagggaagctattgagaaaaaacttttagaaaagatacaa
caacttgagaatcaagtaaaccagagtccatctttcgaaccagtttctggggatgcagca
agtttggtttctgaattacaagaaaagcttcgagaggaaaagcaagcatttttggatcag
cttgaaaagcaagaaaaaagaatgaatgaagaaatgcagaatctcaagacttctctgatt
gcagaacagcagaccaattttaatacagttttaacaagggagcgaatgaagaaagagaat
attataaatgaccttagtgacaaattgaaaatgatagtgcagcaacaagaaagagataaa
gatttaattgaaactctttctgaagatcgagctcgcttactggaagaaaagaaacaactt
gaagaagaagttagcaaattgctaagctttaatttacttccatcaacacatcctacctct
gcttcagagcaatgtggagcctgtgcacttgatatccccatagaaatggagaggttagca
ttagaacccacaggtccagaagaagatagggcagaatcagcaatggaggcaagcatgatg
acagttcatgaaaacctccatatgttatctgaagaaaaacagaggattatgttgctggaa
agaacattacagttaaaggaagaagaaaataagagattgaatcagagattgatgtctcaa
agtatgtcttcagtgtcgtcaaggcattccgaaaaaatagccatcagagactttcaggtt
ggagatctagtacttattatcttggatgaacgtcatgacaattatgtattatttactgtt
agtcccactttatacttcctgcattcagagtctcttgctgcactggatcttaaaccaggt
gagtatgttacaggtgcatctagaaggccttgggtattaggaaaagtaatggaaaaggag
tattgtcaagcaaaaaaggcacagaacagatttaaagttcctctgggtacaaaattctac
agagtaaaagcagttccatggaacaagaaagtataa
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integrated database retrieval system
