Geotrypetes seraphini (Gaboon caecilian): 117355341
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Entry
117355341 CDS
T09159
Symbol
NHLRC1
Name
(RefSeq) E3 ubiquitin-protein ligase NHLRC1
KO
K10602
E3 ubiquitin-protein ligase NHLRC1 [EC:
2.3.2.27
]
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117355341 (NHLRC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gsh04121
]
117355341 (NHLRC1)
Enzymes [BR:
gsh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117355341 (NHLRC1)
Ubiquitin system [BR:
gsh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117355341 (NHLRC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
zf-RING_5
zf-RING_2
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
Prok-RING_4
Baculo_IE-1
zf-C3HC4_4
Beta-prop_EML_2
WD40_WDHD1_1st
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
117355341
NCBI-ProteinID:
XP_033789648
UniProt:
A0A6P8QQ46
LinkDB
All DBs
Position
2:191788622..191790120
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AA seq
392 aa
AA seq
DB search
MSASTSKQIRAMQDLVYIAEVNLLECKVCFEKYGQQEPRRPRNLTCGHVLCSACVSSLAR
PALECPFCRRACSPSRTSDCLPLLHLRDIFSRVASDPVSSDATEEAEGPVVRLSPARFSL
NFSFGGWGLLVSPTGMTVCPKLGCIAVVQDGKKRIKLFSMAGACIQQLGEKRDSGGSVRY
PLDVAMTSDGYLVVTDAGDRSVKVFDLKGRCKLVVRGIFCLPWGVDVNPQNEILVTDTEA
GALWLLQADLRKEQVKRSQRVHSSLCQPRGVAVCPATGTLAVIEHLSTGGTRVKLFSSSM
AFIGQMDSLGLSSLLPSEIHAGGVAFGRGGAILVTDVQNGAVLSLGTARDFPSVRTLVTR
GLCYPTAVNWLENESLVVLDSGDHSVKIFAGC
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcctcgacctcaaagcaaatccgggccatgcaggacctcgtgtacatagcagag
gtcaatctgctcgaatgcaaggtctgctttgagaagtacggccagcaggagccacgccgg
cccaggaacttaacctgtggccatgttctgtgctcagcgtgcgtctcttccctggcacgg
ccggcgctggagtgccctttctgtcgtcgggcctgcagcccgtctcgaaccagtgactgc
ctgcccctgctgcacctcagagacatcttcagccgtgtggctagcgaccccgtctcttca
gacgccacagaagaagcagagggtccagtggtcagactgtcaccagcaaggtttagctta
aacttttcttttggaggttggggactgttagtcagtcctactggcatgacggtgtgcccg
aaattaggctgcatagcggtggtgcaagacgggaagaagcggatcaaacttttcagcatg
gctggggcgtgcattcagcagctgggagagaaaagagactctggcggcagcgtccgatac
cccctggatgtcgcgatgacttcggatggctatttggtggtgacagacgctggagaccgc
tccgtgaaagtgtttgatctgaagggcaggtgcaagttggtggtccgggggatattctgc
cttccctggggtgtcgacgtcaacccccaaaacgaaattctggtgacggacaccgaggcc
ggggcgctgtggcttttgcaggcggatctcaggaaggagcaagtgaagagaagccagcgg
gtgcactccagcctgtgccagccgaggggagtggcagtctgccccgccaccggcactctg
gctgtcatcgagcacttgagcacgggaggaacgagagtgaagctgttcagcagcagcatg
gcattcattggccagatggacagtttgggcttaagttcacttttgccttcggaaatccat
gcggggggcgtggcctttggcagagggggggctattttggtgacagatgtacagaatgga
gcggtgctaagcctggggacagccagggattttccttcagtccggactcttgtcactcgt
gggctctgctaccctacagctgtgaactggctggagaacgagtccttggttgtgctggac
agtggagaccattctgtcaaaatatttgcaggctgttga
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integrated database retrieval system
