Geotrypetes seraphini (Gaboon caecilian): 117355370
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Entry
117355370 CDS
T09159
Symbol
SS18
Name
(RefSeq) protein SSXT isoform X1
KO
K15623
protein SSXT
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
117355370 (SS18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gsh03036
]
117355370 (SS18)
Chromosome and associated proteins [BR:
gsh03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
117355370 (SS18)
GBAF(ncBAF) complex
117355370 (SS18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
117355370
NCBI-ProteinID:
XP_033789713
UniProt:
A0A6P8QQA4
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Position
2:136644381..136789914
Genome browser
AA seq
417 aa
AA seq
DB search
MSVAFAAPRQRGKGEITPAAIQKMLDENNHLIQCIMDYQNKGKTSECSQYQQMLHTNLVY
LATIADSNQNMQSLLPAPPTQNMPMGPAGMNASGPPPPSRSHNMSSDGMVGGGPPAAHMQ
NQLNGQMPGPNHLPIQGPGPNQLNISNSSMNMPSNSHGSMGGYNHSVPSSQNMPVQNQIS
INQGQAIANYGPRPNISMQPNQGPMMHQQPPSQQYNMPQGGGQHYQGQQPPMGMIGQVNQ
GNHIMGQRQIPPYRPPQQGPPQQYSGQEDYYGDQYSHGGQGPPEGMNQQYYPDGHNDYGY
QQPSYPEQGYDRPYEDSSQHYYEGGNSQYGQQDAYQGPPQQQGYPPQQQQYPGQQGYPGQ
QQGYGPSQSGPGPQYPNYPQGQGQQYGGYRPAQPGPPQPQQQRPYGYDQGQYGNYQQ
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtggcctttgcggccccgaggcaacggggaaaaggcgagatcacgccagccgcc
atccagaagatgttggatgaaaataaccatcttattcaatgtataatggattatcagaat
aaaggaaagacttctgaatgttctcagtatcaacagatgctacacacaaacttggtgtac
ttagcgacaatagctgactccaatcaaaatatgcagtctttattaccagcaccacctaca
cagaatatgcctatgggtccagcagggatgaatgcaagtggccctcccccaccttcccgt
tctcacaacatgtcttcagatggtatggtaggtgggggccctcctgcagcacacatgcag
aaccagctgaacggccagatgcctggacctaatcacttgcctatacagggcccagggcct
aatcaactcaacatatcgaacagttcaatgaacatgccttcaaatagccatggatctatg
ggaggttataatcattcagtgccatcatcacaaaacatgccagtacagaatcaaataagc
ataaatcaaggacaggccatagccaactatggtccccgaccaaacatcagcatgcagcca
aaccaaggtcccatgatgcaccagcagcctccttctcaacaatacaatatgcctcaggga
ggtgggcagcattatcaaggacaacagccacctatgggaatgataggtcaagttaaccag
ggaaatcatataatgggtcagaggcaaatcccaccctatagaccacctcagcaaggcccc
ccacagcagtattcaggccaagaagactattatggggaccaatacagtcatggtggacaa
ggtcctccagaaggcatgaatcagcaatattatcctgacggtcataatgattacggttat
cagcaaccgtcgtatcctgaacaaggctacgataggccttatgaggattcctcacaacac
tactacgaaggaggaaattcacagtatggtcagcaggatgcctatcaaggaccacctcaa
caacagggttacccaccacagcagcagcagtacccaggccagcaaggttatccagggcag
caacagggttatggtccttctcagagtggacctggaccccagtaccctaattatccccag
ggacaaggccagcagtatgggggatataggcctgcacaacctggacccccacagccacag
caacagaggccttatggatatgatcagggtcagtatggaaattaccagcagtga
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