Geotrypetes seraphini (Gaboon caecilian): 117355453
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Entry
117355453 CDS
T09159
Symbol
LAMA1
Name
(RefSeq) laminin subunit alpha-1
KO
K05637
laminin, alpha 1/2
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04510
Focal adhesion
gsh04512
ECM-receptor interaction
gsh04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117355453 (LAMA1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117355453 (LAMA1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
117355453 (LAMA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_1
Laminin_G_2
Laminin_EGF
Laminin_B
Laminin_N
Laminin_I
Laminin_II
Laminin_G_3
3keto-disac_hyd
Hepar_II_III
Motif
Other DBs
NCBI-GeneID:
117355453
NCBI-ProteinID:
XP_033789904
UniProt:
A0A6P8Q118
LinkDB
All DBs
Position
2:complement(150722743..151134832)
Genome browser
AA seq
3106 aa
AA seq
DB search
MLLPRALLLLLLFLGAPVTGQLRGLFPAILNLASNAHITTNATCGERGREMFCKLVEHVP
GQPILHSQCQICDQNSVKPEEQHPISNAIDGTNNWWQSPSIQNGREYHSVTITLDLKQVF
QVAYIIIKSAISPRPGNWILERSVDGIKFSPWQYYAISDTECLIHYNITPRLGPPTYKRD
SEVICTSYYSRLNPLENGEIHTSLINGRPSADDPSSALLEFTSARYIRLRLQRIRTLHAD
LMTLSHRDPKDVDPIVTRRYFYSLKDISVGGMCICYGHAQSCPWDETTMKLQCQCEHNTC
GESCNECCPGYHQTPWRPGTISSGNKCEKCNCHNKADDCYYNQTIADHHMSLNIQDQFIG
GGVCINCTQHTTGINCETCTEGYYRPHKISPYEDNPCLPCDCDPFGSLSLICVRDDKQAN
QKLGVLPGQCQCKEEYTGEKCDSCQFGYRGYPYCTQCNCSLAGSINDDPCVDPCFCRENV
EGENCDHCKPGFYNLQERNPQGCTECFCFGVSGVCDSLFWHRSQVSDNNGWLITDQYGAT
RIQPHYDLDQNSINNTEARKDLKSTYYWTAPNAYLGNKLTAFGGYLNYTVSYDISVESAD
SELVSNVDVIIQGNGHVLSTRSEGLLLQPYEEHTNEVKLVPESFIDFSNKRAIDRDKLMI
VLANINSLQIRASYNVAQRAVYRLHSVTLDVASPNVIDLLPAVEVENCECPKGYAGISCE
SCMSGYYRVDGILFGGICEPCKCNGHAVECDIYGTCFDCQHNTTGAHCDQCVLGFYGTPS
QGTAEDCQACACPLSVPSNNFSPTCHLDKEGEVICDQCPPGYAGSRCERCANGYYGNPTV
PGGSCIPCDCNGNANQLESGYCNATTGECLKCIQNTTGSHCERCAKGYYGDAVIAKNCSA
CGCHVHSSLLSICHHETGLCECRPNVIGQRCDQCLSGYYGLNTGLGCLSCNCNKSGSVSE
RCSDDGQCPCAPGVAGEKCDRCAYGFYSFQNGGCTPCDCAHTHNNCDPDSGQCICPPHTL
GPKCELCETNYWGHDDELGCEVCNCSTVGSVSPQCDVATGQCQCKREFGGEVCDRCTYGF
RNYPNCVSCDCDVNGTKPEWCDEKQGVCSCGDDTGICACKENVVGIQCRECRTGTFALRA
DNDLGCSPCFCFGLTQFCAELEGHVRIPVNLTPDHSVLHVVSQSNLTGTTEGVFSQFPDF
VLDVTTVQHHLDREPYYWRLPVQFQGDKLMAYGGKLKYVVAFYASNGSGASDLEPQILMK
GGHFNKLMIYRDILSPGNGIRSEAEIEMREHSWKYFNTRSDQSVSHSDFMSVLSNIEYIL
IKASYGQGLVQSRISNISLEIGVEAEEMHSGREAAHYVEMCDCPSGYAGFSCQECAVGYY
REYLPELNAKRPHPLIAPCVPCQCNNHSENCDPETGKCQNCQDNTGGDNCNVCASGYYGK
VTGSISDCSLCACPKANTKSFSPTCVLEGDSDFRCDACLSGYEGQYCERCSLGYYGNPSE
PGGSCSPCECNPSGSVDILCDRISGHCVCKRGVTGHLCDMCQPRHLLLEKECISCDDDCT
GVLLNDLENLTTAIPALNFTGVMMKPYGILLELENITKHMKESLFSEEHSSDTLENREEQ
LRNFSRSTDHVQEEVARAFASGQQLNSATKTALNKIQELIAYIVKTQATIKVLAGMAISL
NESLGADFQLSNDTLQDLHEELSAILQVMRARDFLKHQQNASIELKAAEKLLLRAQKECE
KPQQNLNKLKENIHTLLEDHRTKLQEAKELVNEARTASDETIQLLALILRNLAELNEKKH
IVFESKDLSVTLTEEGLRLVTEAARLTEDTLNVTSSLEAHRDELILWNGKIRHHVDNLVM
QMAKRGALDLVYRAEDHTAKLQSLARALDSALLDVRNVSLNATAAIHAPSTIQSLIEQAE
SLGEESKWTGEATLELVFKSDGSLDSIGKKALKLNIELLKDARNLSRKAEDLLSDLNELK
ERERKTQDGANKISKQLSNQLLALRSLPNDTGENLLLAKELAVSANTSALYALNHLMNFS
QTLMSKSSALSKVNDTLLKTSELLIDSSKAAVSAEKKVKEVETQANLLLNRLKPLKMLEE
NLSRNLSEIKELISQARKQAASIKVAVSADRDCVRAYRPQISSTNYNTLTLNVKTSEPDN
LLFYLGSSTSSDFMAIEMRRGKVSFLWDLGSGSTRLDYPDFQINNNKWHRIHATRYGKTG
TLSIQEVSSSQMPLIKTTKSMGTSTVLDVNISTRVFIGGLGGQVKKSPAVKVTHFKGCMA
EASLNGKSIGLWNYAEREGKCGGCFGSPEDEDASFTFDGSGYSVVEKTLRSTVTQIVMLF
STFSPNGLLLYLASNGTSDFLSLELVDGRVRLTVDLGSGPLSLTTEKRYNNGTWYKIAFQ
RNKKQGLLSVMDAYNSNSKETKQGESPGMASDLNRFDKDPIYIGGLPRSRSVRKALSSRS
YVGCIKNVEIARSNFDLLRNSYGVRKGCKLEPIRSITILSDGYIELLPKALSPETEMMVT
FATKNHTGIILAGLSKGLVKRSRRQTHVPFFSVMLIDGHIEVQVNPGDGASTKRLSIKPT
AATYHDGEEHSVILTRSKRVITVQVDDGDPTEVRLGGPLAETSPMNVSSLYIGGIPSGEG
ITVFRTQKSFYGCIRNVIFNQELLDFTTALKYEQVDMENCLLSEKPKPAALFEEADPHPA
PQLSPAPARVTIDKNIHTTTSARAAAVAKVQCAAEEKPGHVTGAHQFGLTRSSHLVLPFD
QTNVKKKLSVQLNLRTYASSGLIYYMAHQNQMDYAALQLHEGRLYFLFDLGKGKAVTVHP
TAISDGKWHTIKTEYVRKKGTILIDGKASSAVSVLGNSNTLDVEGKLYLGGLPLDYTAKH
IGNVTHSIPACISSVKINSKLLDKVSPLSIHAVNKCYTAAQEGTFFDGTGFAALVKEGYK
VRSDVNITFEFRTTAMNGVLLGISSAKVDAIGLEIVNNKVMFHVNNGAGRITVSSVPSGS
RILCDGKWHKLEVNKSKHHIALTVDGNTVQAVNPHAQSTSADTNNPIYVGGYPADVKQNC
LNSHISFRGCMRNLMLIKSQQTDAYDLSRAFVLHGVFPHSCPGKED
NT seq
9321 nt
NT seq
+upstream
nt +downstream
nt
atgctgctccctcgcgcgctgctgctgcttctcctcttcctcggcgccccggtgaccggc
cagctgagaggcttgtttcctgccattctgaaccttgctagcaatgcacatattaccaca
aatgctacctgtggtgagagagggcgtgaaatgttctgcaaactggtggaacatgtgcca
ggtcagcctattctccattcacagtgccaaatctgtgaccagaatagtgtcaaacctgaa
gaacaacatcccatttcaaatgctatagatggtaccaataactggtggcaaagtcccagc
attcaaaatgggcgggagtaccactcggtcacaattaccctggacttgaaacaggtgttc
caagttgcatatattatcatcaaaagtgctataagccctcgacctggaaactggatattg
gagcgctctgttgatggaatcaaattctcaccatggcagtattatgcaattagtgacaca
gagtgtttaattcattacaatataacaccaaggcttgggcctcccacttacaagagagac
agtgaggtgatttgcacctcctattactcccgacttaatcctctggagaatggagagatt
cacacttccttgattaatggcagacccagtgccgatgatccctcctcagcactcctggag
tttacctctgcccgctatatccgccttcgtctgcagcgaattagaacattgcatgctgac
ctcatgacccttagccaccgtgatcctaaagatgttgatccaatagtcaccagaaggtat
ttctattcgctgaaagatatctctgttggaggcatgtgcatttgctacggtcatgctcaa
agctgcccctgggatgaaactacaatgaaactgcagtgccagtgtgagcacaatacttgc
ggagagagctgcaatgagtgttgtcctggctaccaccagacaccatggagacccggaacc
atttcttctggcaataaatgtgagaagtgcaactgtcataacaaagcggacgactgttac
tataaccaaaccatagcggatcaccatatgagtttgaatatccaagatcagtttattggt
ggaggagtttgtataaactgtacccagcacaccacgggaatcaattgtgaaacctgcacg
gaaggatactaccgaccacacaaaatttctccttatgaggataacccatgccttccttgt
gattgtgatccatttggatccctcagcctcatttgtgttagggatgataagcaggctaac
cagaagctaggcgtccttccgggtcaatgccagtgcaaagaggaatacaccggagaaaaa
tgtgatagctgtcagtttggataccggggttacccctactgcacacagtgcaactgcagt
ctagcaggtagcatcaatgatgacccctgcgtggatccgtgtttttgcagagaaaatgtt
gagggtgaaaactgcgaccactgcaagccaggattttacaatctgcaagagaggaatcct
caaggctgcactgaatgcttctgttttggcgtctcgggtgtctgtgacagtctgttttgg
catagaagtcaggtatcagataataatggctggcttatcactgatcagtatggtgctacc
agaatccaaccccattatgaccttgaccaaaatagcattaataacacagaggctaggaaa
gatctgaagtctacgtattactggacagcaccaaatgcataccttgggaataagctgaca
gcctttggtggatatttgaactacactgtgtcttatgatatttcagtggaaagcgcagac
agtgaattagtctccaatgtggatgtaattattcagggcaatggacatgtgttaagtaca
agatctgaggggctgctgttacagccctatgaggaacataccaatgaggtgaagcttgta
ccagagagcttcatcgacttcagtaacaaaagggctatcgatcgggacaagctgatgatt
gtcctagcaaacataaatagcctccagatcagggccagttacaatgttgcacagagagca
gtctacaggttacattcggtgactttggatgtagcaagccctaatgtcattgacctctta
ccagcagtagaagtggaaaactgtgaatgtcctaaaggctatgcaggcatttcctgtgag
tcttgcatgtcaggatactaccgtgtggatggaattctatttggaggtatttgtgagccc
tgcaaatgcaatggccatgctgttgagtgtgacatctacggcacatgctttgattgtcag
cacaacaccacaggagctcactgtgatcagtgcgtgcttggcttctatggaactccatcc
cagggaaccgctgaggactgtcaggcatgcgcttgtccgctgagcgttccatccaataat
tttagtccaacctgccacttagacaaagagggtgaggtgatctgtgaccagtgtccgcca
ggctacgcaggatcccgatgtgaaagatgtgcaaatggttattatgggaatccaacagta
cctggagggtcttgtattccctgtgactgcaatggaaatgccaaccagcttgaaagcggt
tactgcaatgcgaccacaggggaatgtctaaaatgcattcagaatacaactggaagtcac
tgtgagaggtgtgctaaaggctactatggggatgctgtgattgccaaaaattgcagtgct
tgtgggtgccatgtgcatagttcccttttgagcatttgccatcatgaaacaggcctgtgt
gaatgtaggccaaatgtgattggacaacggtgtgatcagtgcttgtctgggtattatggc
ttgaacactggactcggatgtctttcctgcaattgcaataagtctggctctgtctctgag
cgctgcagtgatgatgggcaatgtccttgtgccccaggagtggccggagagaagtgtgat
cgctgtgcttacggcttttattcattccagaatgggggctgcacaccttgtgactgtgct
catacacacaacaattgtgatccagattctgggcaatgcatatgtccacctcacactttg
ggtccaaagtgtgaactctgtgagacaaactactgggggcatgatgatgaactcggatgt
gaggtttgcaactgcagtactgttggttcagtcagtccacagtgtgatgtagccactggc
cagtgccaatgtaaacgtgagtttggaggggaagtctgcgacaggtgtacctatgggttc
agaaactatcctaattgtgtctcctgtgactgtgatgtgaatgggaccaagccagagtgg
tgtgatgaaaaacaaggagtctgtagctgtggggatgacactggtatctgtgcttgtaag
gaaaacgtggttggaattcagtgcagagaatgcagaactggaacatttgctctgagagca
gataatgacttgggctgttctccatgtttctgttttggactgactcagttttgtgctgaa
ttggaaggtcatgtcagaattcctgtaaatctgaccccagaccattccgttctacatgtg
gtttcgcagagcaacttgactggaaccactgaaggcgttttttctcaatttcctgatttt
gtactagatgtcacaacagtgcagcatcatctggatagagaaccctactattggaggtta
cctgtccaattccaaggagataagctaatggcctatggaggaaaattgaagtatgttgtt
gcattttatgcctcaaatggttctggtgcttcagaccttgagccacagattctgatgaaa
ggcggtcatttcaataaactaatgatctacagggatattcttagtccaggcaatggaata
cgaagtgaagctgaaattgaaatgagagaacattcctggaaatattttaacactaggtct
gaccagtctgtttcacattctgacttcatgtcagtcctaagcaatattgagtacatcctc
atcaaggcttcttatggccaaggcctagtacaaagcagaatctcaaacatttcactggag
attggagttgaagcagaagaaatgcattctggtagagaagcagcacattatgtagagatg
tgtgactgtccttcaggatatgctggattttcatgccaggagtgtgcagttggttattac
agagaatacctgcctgaacttaatgccaaaagaccacacccattaattgcaccttgtgta
ccatgtcagtgcaacaatcacagtgaaaattgtgatcctgaaaccgggaaatgccagaac
tgccaagataatactgggggtgataactgcaatgtgtgtgcttctggatactatggaaaa
gtgactgggtcgatcagtgactgctctctttgtgcatgccccaaagccaacaccaaaagt
ttcagtcccacctgtgtattggagggtgatagtgatttccgctgtgacgcttgcctctct
gggtatgaaggccagtactgcgaaagatgctctctaggctattatggcaatcccagtgaa
cctggcggcagctgcagtccatgtgaatgcaaccccagtggctcggtggacattctgtgt
gacagaatatcaggacactgtgtctgtaagcggggtgtaacaggacacctctgtgatatg
tgccagccaagacatcttctcttagaaaaagaatgcatatcttgtgatgatgattgcaca
ggagtgctattaaatgacttggagaacctcaccacagccattcctgcattgaacttcact
ggggtgatgatgaagccttatggcatcctgctggaattggaaaacataacaaaacatatg
aaggaatctttattctcagaagaacattcatctgataccttagagaacagagaagagcag
ttaagaaacttttccagaagtacggatcacgtgcaagaagaggtggcacgagcatttgca
agtgggcagcagctgaacagcgctactaaaactgccctgaacaaaattcaagagttgatt
gcatatattgtcaaaacacaagcgaccattaaagtgcttgctggaatggccattagtctg
aatgagtctctgggtgctgacttccagctgtctaatgacacgctccaggacctgcatgag
gagctctctgccatcttgcaagtaatgcgggcaagggattttctgaaacaccaacaaaac
gcttcaatcgagctcaaagctgcagaaaaattgttgctccgtgctcagaaggagtgtgag
aaacctcaacagaatctgaataagctaaaagagaatatacacactttgctggaagatcat
aggaccaagctgcaagaagccaaagaactggtgaatgaagcacgcacggccagtgatgag
accattcaacttctcgcccttattctccgtaatctggcagagttaaatgagaagaagcat
attgtctttgagagcaaggatctctcagttacgctaactgaagaagggctgagacttgtg
actgaagcggctcgtctgactgaagatacattaaatgtgacatcttccttagaggcccac
cgggatgagctcattttatggaatggcaaaatacgccatcatgtggataacttggtgatg
cagatggccaaaaggggagctctagacctggtgtaccgggcagaagatcatacagctaaa
cttcagagtcttgcacgagcactagacagtgctctcttggacgtaagaaatgtgtccctg
aatgctacggctgctattcacgcaccatccaccatccaaagccttattgagcaggctgag
agtttgggtgaagagtctaagtggacaggagaagctacactagagttggtatttaaatct
gatggctctcttgactccattgggaaaaaagctcttaaactcaacattgaactcctgaag
gatgcaagaaatttgagcagaaaggcagaagatcttctgtctgatttgaatgaactgaaa
gaaagagagaggaaaactcaagatggcgccaataaaattagcaaacagctgagtaaccaa
ctgcttgcactgagatcactgcccaatgatactggtgaaaacctgcttttagcaaaggaa
ctcgctgtgtcagccaacaccagtgcactgtatgctttgaaccatcttatgaatttcagt
cagacgctgatgagcaaatcctctgcactgtccaaagttaatgatacattgctgaaaacc
agtgaactcttaatcgactcatcaaaggctgccgtctcggctgaaaagaaagtaaaagaa
gtggagactcaagcaaacctattactgaacagattgaaacctctgaaaatgctggaggaa
aatcttagcagaaacctgtccgagattaaagaactcatcagccaggcacgcaaacaggca
gcgtctattaaagttgcagtctcagcagatagagactgtgtccgggcctatcgcccacaa
atctcatccaccaactacaacactttaactctaaatgtgaaaacaagtgaaccggataac
ctcctcttctacctgggcagcagcaccagttctgattttatggcgatagaaatgcggcga
ggtaaagtctctttcctgtgggatttaggctcaggttctaccaggttggattatcctgac
tttcaaattaacaacaacaagtggcacagaatacatgcaaccaggtatgggaagactggc
acattgagcatccaagaagtgagttcctctcaaatgccgttaattaaaaccaccaagtca
atggggacttcgactgtactggatgtcaacatatcaacccgagtgtttattggaggactt
ggaggacaggtcaagaagtcaccggcagttaaagtgacccattttaaaggctgcatggca
gaggcatccctgaatgggaaatccattggtctctggaactacgctgaaagggagggcaaa
tgtggtggatgctttggaagcccagaagatgaagatgcgtcattcacttttgatggtagt
ggatattctgttgtagaaaagaccttgcgctctaccgtgacacagatagtgatgctgttc
agcaccttctcaccgaatggacttcttctttatcttgcatctaacggcacgagtgatttc
ttgtcgcttgaactagttgatggcagggttagactaaccgttgaccttggatcaggacct
ctatctctcacgacagagaaacgttacaacaatgggacgtggtataaaattgctttccaa
cgcaacaagaagcaaggtctgttatcagttatggatgcatataactccaattctaaggaa
accaagcaaggggaatcccctggcatggcctcagatctaaatcgctttgataaggatcca
atatacattggtggactccctcgatcaagatcagtcaggaaagctcttagcagcaggtca
tatgttggctgcataaaaaatgtggaaattgcacgctccaactttgacttgttaagaaac
tcctatggtgtaagaaaaggctgcaaattagagcctattcgcagcattaccatcttgagt
gatggctatattgaattactgcccaaagccttgtcaccagaaacagagatgatggtgaca
tttgccactaagaatcacactggaattattcttgcggggctcagcaagggactggtaaaa
cgaagccgcaggcaaacccatgtgcctttcttttctgttatgctgattgatggccacatt
gaagtgcaagttaatcccggggatggagccagcaccaaaagactgagcatcaagccaaca
gccgcaacatatcacgatggagaggaacattctgttatcctgactcggagtaaaagagta
atcacagtgcaggttgatgatggtgatcctacagaagtaaggctgggtgggcccctggct
gaaacaagccccatgaatgtttctagtctgtacattggaggcattccttctggggaagga
ataactgtattcaggacacagaaatcattttatggatgcatcagaaatgttatctttaat
caagagctcttggattttactactgccctaaaatatgagcaagtagatatggagaactgc
ttactctcagaaaagccaaaaccagctgcacttttcgaagaagctgaccctcaccctgca
ccacagctatctccagcccctgccagggtcaccatagacaaaaacatacacacgacaacc
tcggcccgagctgctgcagttgcaaaagtacaatgtgcagcagaggagaaaccaggtcat
gtcaccggtgcccatcagtttgggctcaccaggagcagtcacttggtgctaccatttgac
cagactaatgtcaaaaagaagctgtctgtacaactgaatcttagaacctatgcatccagt
ggtctgatttattacatggctcaccagaatcaaatggattatgcagctctgcagcttcat
gaggggaggctctatttcttgtttgacctagggaaaggcaaggcagtcactgttcacccc
actgccattagcgatggaaaatggcacacaataaagacagaatatgttagaaagaagggt
acaatcctcattgatgggaaggcctcgtctgctgtcagtgttctaggaaacagtaacact
ttggatgtagaaggaaaactctatcttggaggtcttcctttggactatacagcgaagcat
attggaaatgttacacacagtattccagcatgcatcagtagtgtgaagattaatagtaaa
ctgctggacaaagtgagccctctttcaatccatgctgtgaataagtgctatacagctgcc
caagaaggcactttctttgatggaactggatttgctgctctggtcaaagaaggttacaaa
gtacgatcagatgtgaacattacatttgagtttcgcactacagctatgaatggtgtcctc
cttggaatcagtagtgccaaagttgatgctattggactggaaattgtgaataacaaggtt
atgtttcatgtcaacaatggagcaggcagaatcaccgttagctctgtgcccagcggttcc
agaatcctgtgcgatggcaagtggcacaaacttgaggtgaacaagagtaagcatcatatt
gctttgactgtggatggaaacacggtgcaggcggtgaatcctcatgcccagtccacatct
gcagataccaacaatcctatctatgtcggtggctatcccgctgacgtgaagcagaactgt
ctgaatagccatatttcattccgaggatgcatgagaaacctgatgctgattaaaagccag
cagacagatgcctatgacctcagcagagcctttgtcttgcatggagtctttcctcattcc
tgtcctgggaaggaagattaa
DBGET
integrated database retrieval system
