Geotrypetes seraphini (Gaboon caecilian): 117355658
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Entry
117355658 CDS
T09159
Symbol
TAF2
Name
(RefSeq) transcription initiation factor TFIID subunit 2 isoform X1
KO
K03128
transcription initiation factor TFIID subunit 2
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
117355658 (TAF2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gsh01002
]
117355658 (TAF2)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gsh03021
]
117355658 (TAF2)
03036 Chromosome and associated proteins [BR:
gsh03036
]
117355658 (TAF2)
Peptidases and inhibitors [BR:
gsh01002
]
Metallo peptidases
Family M1
117355658 (TAF2)
Transcription machinery [BR:
gsh03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
117355658 (TAF2)
Coactivators
SAGA/TFTC/STAGA complex
117355658 (TAF2)
Chromosome and associated proteins [BR:
gsh03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
117355658 (TAF2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_TAF2_C
TAF2_3rd
Peptidase_M1_N
Peptidase_M1
SR-25
Motif
Other DBs
NCBI-GeneID:
117355658
NCBI-ProteinID:
XP_033790441
UniProt:
A0A6P8QV62
LinkDB
All DBs
Position
2:46245654..46463532
Genome browser
AA seq
1211 aa
AA seq
DB search
MQTVQLPRMNRKKGDKGFESPRPYKLTHQVVCINNINFQRKSVVGFVELTIFPTVANLTR
IKLNSKQCRIYRVRVNDLEAAFIYNDPTLEICHSESKQRNLNYFSNAYAAAVSAVDPDAG
NGELCIKVPSELRKHVDELKPLKVYIEFSLDQPKGGLHFVVPNVEGSMAEKGAHAFSYGY
QNSTRFWFPCVDSYSELCTWKLEFTVDAAMVAVSNGDLVETVYTHDMRKKTFHYTLTIPT
ASPNISLAIGPFEILVDPYMHEVTHFCLPQLLPLLKHTTSYLHEVFEFYEEILTCRYPYS
CFKTVFVDEAYVEVAAYASMSIFSTNLLHSAMIIDQTPLTRRCLAQSLAQQFFGCFISRM
SWSDEWVLKGISGYIYGLWMKKTFGVNQYRYWIKEELDQIIAYELNTGGVLLHPMFSVGK
EKDNTASHLHFSIKHPHTLSWEYYNMFQCKAHLVMRLIENRISMEFMLQVFNKLLSLAST
ASSQKFQSHMWSQMLVSTYGFLKSISNVSGKDIQPLIKQWVDQSGVVKFYGSFAFNRKRN
VLELEIKQDYTSPGTQKYVGPLKVTVQELDGSFNHTLQIEENSLKHDIPCHSKSRRNKKK
KIPLMNGEEVDMDLSAMDVDSPLLWIRIDPDMSVLRKVEFEQTDFMWQYQLRYERDVVAQ
EESILALENFPTPASRLALTDILEQEQCFYQVRMLACFCLAKIANSMVSTWTGPPAMKSL
FTRMFCCKSCPNIVKTNNFMNFQSYFLQKTMPVAMALLRDVHNLCPKEVLAFILDLIKYN
DNRKNKFSDNYYRAELIDALANSVTPAISVNNEIRTLENLNPDVRLILEEITRFLNMEKL
LPSFRHTITVSCLRAIRVLQKNGHVPSDSTVFKSYAEYGHFVDVRIAALEAVVDYTKVDR
SSEDLQWLLKMAQTDALPYIRHKILHMLTKNPPFTKNMESPLCNEDLVDQLWKLMNSGTS
HDWRLRCGAVDLYHVLFGLSRPSCLPLPELGLVLNLKEKKAVLNPTIIPEPTAIVQEPLP
NPNFQSLFPGFQNTLQDDDLFVKEESCIVPFQQQGIKRKADTPLGSPLEPGQVLEKNEDN
SKVKLKIRFSNSQEEEEIDMDTVHDSQAFIYHHLNMLERPSTPGKEQSSLDLHMLPVPST
PLSVFTKELTSSKHSDHHHHHHHDHKKKKKKHKHKHKHKHKHESKEKEREPFTFSNSPAS
GRSIHSPSLSD
NT seq
3636 nt
NT seq
+upstream
nt +downstream
nt
atgcagaccgtacagctgcccaggatgaaccgcaagaagggagacaagggattcgagagt
ccgcgcccttacaaattaacccaccaggtagtctgcattaacaacataaacttccaaaga
aagtctgtagtaggttttgtggagctgacgatatttcccacagttgcaaatttgactcgg
atcaaattgaacagcaagcaatgcaggatatacagagtgagggtcaatgatttggaggct
gcttttatatacaatgatccaaccctggagatctgtcacagtgaatcaaaacagagaaat
ctcaattatttttccaatgcttatgctgctgcagttagtgctgtggaccctgatgctgga
aatggagaattgtgcattaaagttccatcagagctacggaagcacgttgatgaacttaag
cccctaaaggtgtacattgaattttctttggaccagcctaaaggaggtctacattttgtg
gtgcctaatgtagaaggcagtatggcagagaagggggctcatgctttttcctatggctat
cagaattctacaagattttggtttccttgtgtggattcatactctgaactgtgtacatgg
aagctggagttcacagtggatgctgctatggtggctgtttcaaatggagatttggtggag
accgtttacacccatgacatgagaaaaaagacctttcattacacactgactattcctact
gcttctcctaacatctctcttgctattgggccttttgaaatccttgttgacccttacatg
catgaggtaactcacttttgcttacctcagcttcttccattgttaaaacacaccacttct
tacctccatgaagtctttgagttttatgaggagattctcacctgccgctatccttactcc
tgttttaagacggtctttgtggatgaagcttatgttgaagtagctgcatatgcctctatg
agtatttttagcacaaatcttctgcacagtgccatgattatagatcaaactccactgacc
cgaaggtgtttagctcagtccctggcccagcagttttttggttgctttatatccagaatg
tcttggtcagatgaatgggtgctaaaaggaatctcaggctatatatatggtctttggatg
aaaaagaccttcggtgtcaatcagtatcgatactggattaaagaggagttggatcaaata
atagcatatgaactgaacactggaggagttctgttgcatccaatgttctctgtgggaaag
gagaaagataacactgcatcacatcttcacttttctataaaacatcctcacaccttgtcc
tgggaatattacaacatgttccagtgcaaagcccaccttgtcatgcgattgattgaaaac
cggatcagtatggagttcatgttacaggttttcaacaaattgttgagcctggccagcact
gcatcatcacaaaagtttcagtcccacatgtggagtcagatgttggtttctacatatgga
tttttgaaatccatttccaatgtgtctggcaaagacatacagcctttaataaagcaatgg
gtagaccaaagcggtgttgtaaaattttatggcagttttgcatttaacagaaaaagaaat
gttcttgaattggaaataaaacaagactatacttctccaggaacccagaaatatgtgggc
ccacttaaagttactgtgcaagagctggatgggtctttcaaccacacattgcaaattgag
gaaaatagtttgaaacatgacataccctgccattcaaaaagcagaagaaataagaagaaa
aagattccacttatgaacggagaagaagtagatatggatctttctgcaatggatgttgat
tcccccttactctggataagaatagatccagatatgtctgtattgaggaaggtggagttt
gaacaaactgattttatgtggcagtaccagctgcgctatgaaagagatgtagttgcacag
gaagaatctattttagcacttgaaaatttccctactccagcatcgcgacttgcattgact
gatatccttgaacaagagcagtgcttctaccaagtgagaatgctggcatgcttctgtctt
gccaagattgcgaactcgatggtgagtacttggaccggcccgccagctatgaaatcactt
ttcacgcgcatgttctgttgtaagagttgtccaaacattgtgaagaccaacaactttatg
aacttccaaagttactttttacagaagactatgcccgttgctatggcactgctgagagat
gttcacaatctctgccctaaagaagtcttagcatttattttagatcttatcaagtacaat
gacaacaggaaaaacaagttttcagacaattactatcgtgcagaactgatagatgcttta
gcaaattctgtgacccctgcaataagtgtcaacaatgaaatccggacgcttgagaacttg
aatcctgatgtccgcctcatccttgaggaaatcacgcggtttctaaacatggaaaaactt
ctgccaagttttaggcacactataacagtgagctgtctgagagctattcgcgtgcttcaa
aagaatggacatgtccccagtgattctacagtttttaagtcatatgctgaatatgggcac
tttgtagatgttcgcatagcagcattggaagcagttgtcgattacacaaaagtggacaga
agcagtgaggacctacagtggcttttgaaaatggctcaaacagatgctttaccatatatc
agacataaaatccttcacatgttaacaaagaatccaccatttacgaaaaatatggaatca
cccttgtgtaatgaagatctagtagatcagctttggaaacttatgaattcaggaacttcg
catgactggaggcttagatgtggggctgtggatctctatcatgtactgtttggactcagt
agaccctcttgtctgccactaccagagcttggcttggttcttaatctgaaggaaaagaag
gcagtacttaatcctactatcattccagagccaactgcgatcgttcaagagcctctgccc
aatcctaactttcagagtctgttccctggatttcaaaacactcttcaggatgatgacctc
tttgtgaaagaagaatcatgcattgtcccttttcaacagcaggggataaaaaggaaggca
gacacaccacttggatcaccattagaacctggtcaagtgctggagaaaaatgaggacaat
agtaaagtcaaactaaagattagattctcaaactctcaagaggaagaagagattgacatg
gatactgtccacgatagtcaagctttcatctaccatcatttgaatatgttagaaaggccg
tctacaccaggtaaagaacagtcttcattggatttgcatatgttgccagtaccatcaact
cctctttcagtgttcactaaagagttaacatcatcaaaacacagtgaccatcaccatcac
caccaccatgatcacaagaaaaagaagaagaaacacaaacacaagcacaagcataaacat
aagcatgaaagcaaagaaaaggaacgagagccttttactttctcaaacagtccagccagt
ggtcgatcaatccattctccctcactttcagactga
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integrated database retrieval system
