Geotrypetes seraphini (Gaboon caecilian): 117355674
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Entry
117355674 CDS
T09159
Symbol
KDM1B
Name
(RefSeq) lysine-specific histone demethylase 1B isoform X1
KO
K19413
lysine-specific histone demethylase 1B [EC:1.-.-.-]
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gsh03036
]
117355674 (KDM1B)
Chromosome and associated proteins [BR:
gsh03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
117355674 (KDM1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
zf-CW
SWIRM
DAO
Pyr_redox_2
Thi4
Pyr_redox_3
HI0933_like
FAD_binding_3
Pyr_redox
Lycopene_cycl
FAD_binding_2
FAD_oxidored
GIDA
2-Hacid_dh_C
NAD_binding_9
AlaDh_PNT_C
KARI_N
NAD_binding_7
zf-RING_2
Glu_dehyd_C
TrkA_N
Motif
Other DBs
NCBI-GeneID:
117355674
NCBI-ProteinID:
XP_033790470
UniProt:
A0A6P8Q5F9
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All DBs
Position
2:complement(191598726..191721188)
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AA seq
821 aa
AA seq
DB search
MSTSRVRAKKKSSSLDQSPDSLPLRSSGRQVKKKATDSMEEEDEPSEKKYRKCEKAGCTA
TCPVCFASAAERCAKNGYTSRWYHLSCGEHFCNECFDHYYRSHKDGYEKYASWKRIWTGN
GKSEPSPKAFMADQQLPYWVQCTKSECGKWRQLTKEIQLTPQMARTYRCGMKPNNSVKNE
GPDQCSLPEDMRVCEVSDHRWYSMLILPPLLKDSPAAPLLSAYYPDCVGMSPSCTSTNRF
LFEPSLGKLEHYKGVISSPVVAGMNRYFQPFYQPNECGKALCVRPDVMELDELYEFPEYS
RDPTMYLAMRNLILALWYKNCKEALTPQACAHHIMVRGLVRIRCVQEVEKILHFMTRKGL
VNTGILSARSGQHFLPKEYHNKSVIVIGAGPAGLAAARQLQNFGIKVMVLEAKDRIGGRV
WDEKSLKGVTVGRGAQIVNGCINSPIALMCEQIGIKMRKLRDRCDLIQEGGRITDPTIDK
RMDFHFNAILDVVAEWRKDKTQHQDVPLGEKIQEIYKAFVQESGIQFTELEEKVLQFHLS
NLEYACGSSLSQVSARSWDHNEFFAQFAGDHTLLTAGYSTIMDKLAEGLDIRLKSPVQNI
DYSGEVVRVTSTDGTVWTARKVLVTVPLALLQKNVIQFNPLLPERKLKAINSLGAGVIEK
VVLNFPYRFWDSKIQGADFFGHIPPNSNKRGLFGMFYDMDPQFKQAILMSVITGDAVTLI
KDLNEKQVIQECMTVLRELFKEQEVPDPLKYFVTQWSRDPWIQMAYSFVKTGGSGEAYDI
IAEDVHEKIFFAGEATNRHFPQTVTGAYLSGVREASKIAAS
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacttcacgggtacgagcaaagaaaaagtcaagttctcttgaccagtcccctgat
agccttcctttgcgatcttctgggagacaggtaaaaaagaaggctactgactcaatggag
gaggaggatgagccctctgagaagaagtacaggaagtgtgagaaggctggttgcactgcc
acatgtcctgtgtgctttgctagtgctgctgaaaggtgtgctaaaaatggatatacatct
aggtggtatcatctttcctgtggggagcatttctgcaatgaatgctttgatcattattat
cgcagtcataaagatggttatgagaaatatgcgtcctggaaaagaatttggactggtaat
ggtaaaagtgagcctagtccaaaagctttcatggcagatcagcagcttccttactgggtg
cagtgtactaaatctgaatgtggaaaatggcgtcaactgacaaaggaaatccagcttacc
cctcaaatggcaagaacctacagatgtggtatgaaaccaaacaattctgttaagaatgag
ggccctgaccagtgctccctgcctgaggatatgagagtatgtgaagtctcagaccatcgg
tggtattcgatgcttatcttgcctcctttgctgaaggacagtcccgcagctcccttgttg
tcagcatactatccagattgcgtaggcatgagcccgtcctgtaccagtacaaaccgcttc
ctgtttgaacctagcctcggaaagctagagcactacaaaggtgttatatccagcccagtg
gttgcaggaatgaaccggtacttccagcccttctaccagcccaatgagtgtggaaaagca
ctatgtgtgaggccagatgtgatggaactggatgaactctatgagttcccagagtattct
cgagaccctaccatgtacctggccatgaggaatctcattctagctctatggtacaaaaac
tgcaaagaagctcttacccctcaggcatgtgctcatcacataatggtacgagggctggtg
cgcatccgctgtgtgcaagaggtggagaagatactgcacttcatgaccagaaaaggacta
gtcaacacaggaattctgtctgcccgctctggccagcatttcctcccaaaagagtatcac
aataaatccgtcattgtcattggggctggcccagcagggctagcagctgcgagacagtta
cagaactttggcattaaggtgatggtactcgaagcaaaagatagaattggagggcgagtg
tgggatgaaaagtctctgaaaggcgtgacggtgggaagaggagcacaaattgttaatggc
tgcatcaacagtcctatagctctaatgtgtgagcaaattggcattaagatgcgcaaactt
agagatagatgtgatctaattcaggaaggtggaagaattactgaccccaccatagataaa
cgcatggattttcacttcaatgccattctggatgttgtagctgaatggagaaaggataag
actcagcaccaagatgtccctctaggagaaaaaatacaggaaatctacaaagcctttgtt
caagaatcaggtatccagtttaccgagctagaggaaaaggtgttacagtttcatctaagt
aatctagagtacgcctgtggcagtagcctttctcaggtatcggctcgttcttgggaccat
aatgaattttttgcccagtttgctggagatcacacacttctaacagcaggatattctacc
ataatggataagctagctgaaggattagatattcgactgaagtctcctgtgcaaaatatt
gattactcaggagaagtagtccgggtcactagtacagatggaactgtgtggactgcacgt
aaggttttagttactgtaccacttgcactgcttcagaaaaatgtcatacaatttaatcca
ctgctgcctgagagaaagctgaaggctattaacagtttaggagcaggagttattgaaaag
gttgttttgaatttcccatatagattttgggatagcaaaattcaaggagcagattttttt
ggtcacatacctcctaattccaacaaacgtggcttatttggtatgttctacgacatggat
ccacagtttaagcaggccattttgatgtcagtaattactggagatgctgtcactttaatt
aaggatttaaatgaaaagcaagttatacaggaatgtatgacagtacttcgagaactgttc
aaggagcaggaagttccagacccattaaaatattttgttactcagtggagcagagaccct
tggatccaaatggcttatagttttgtcaagactggaggaagtggtgaggcatatgacatt
attgctgaggatgtacatgagaaaatattttttgctggtgaggctaccaacagacatttt
ccacagactgtcacaggagcgtacctcagcggtgtgcgagaagcaagcaaaatagctgca
tcttaa
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